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The map label for this gene is 86748117

Identifier: 86748117

GI number: 86748117

Start: 1135673

End: 1136899

Strand: Direct

Name: 86748117

Synonym: RPB_0992

Alternate gene names: NA

Gene position: 1135673-1136899 (Clockwise)

Preceding gene: 86748113

Following gene: 86748118

Centisome position: 21.3

GC content: 69.52

Gene sequence:

>1227_bases
ATGGCGATGATCACAGACAACACTCTCCGCAACGCCGCGCCGACCGCGCCCGTTTCATTCCGGCGCGACTCCGTCCCGCT
GTCGCAGCGCGTGGCACAGGTCGCCGCGATCGCGGCGGCCGACGCCGACAGCGTCGACAAACAATCGCGGTTTCCACGCG
CGGCGATCGACGCGGCGAAGGCGCACGGCCTGCTCGGCGCCCAGATCCCGGTCGAATTCGGCGGCGAGGGCGCGACGATC
CACGACGTCACCGAGATGTGCTACGCGCTGGGACGCGCCTGCGCCTCGACCGCGATGATCGTGGCGATGCATCAGACCAA
GGTGGCGTGCCTGGTGCGGCACGGCCGCGGCGGCGACTGGCACGAGCAGTTGATGCGACGGATCGCCGCCGAGCAGATGC
TGCTGGCGTCGTCGACCACCGAAGGCAACAACGGCGGCAACATTCGCGCCAGCGCCGCGGCGATCGAGGTGACCGACGCC
GGCGTGTCGCTGCTCCGCAACGCCACGGTGATTTCCTACGGCGCCGAAGCCGACGGCGTGATGACGATCGCGCGCCGCGC
TTCCGAGGCGGCTGCGTCGGATCAGGTGCTGGTGGTGTTCACCAGCGACGACTACACGCTGACGCCGACGCAGGGCTGGG
AAACCCTCGGCATGCGCGGCACCTGCAGCGCCGGCTTCGAGCTCAAGGCCAGCGGGCTCGCCGCCCAGGTGTTCGCCGAG
CCCTATGAACGCATTCACGCGCAGACCATGACGCCGGTCGCGCATCTGTCGTGGTCGTCGGCCTGGGCCGGCATCGCGGC
GGCCTCGGTCGAGCGCGCGCAAGGCTTCATCCGCAAGGCGGCGCGCGGCGCCGGCGGTCAGATGCCGCCGGGGGCCGCGC
ACTACACCAGCGCGAAGATGTCGCTGTCGAAGCTGCGCGCGCTGATCTCCGCCAATCTCGACGCCTATGCGGCGCATGAA
TACGACGAGCGCGGCCTCGGCTCGCTGGAATTCCAGTCGGCGATCAACCTGCTGAAGGTCGAGGCCTCCGATCTCGCGGT
GGCGACGGTGATGAGCGCGATGCGGGCCTGCGGCCTGTCGGGCTATCGCAACGACGGCGATTTCACCATCGGCCGGCATC
TGCGCGACGTGCTGTCGGCGCCGCTGATGATCAACAACGACCGCATCCTCGCCAATATCGCCACCGCCAACCTGATGAGC
GCGGTGCCGGCGAGCCTGCGCGACTGA

Upstream 100 bases:

>100_bases
CCCTAGCGTGCGGCACGATCGCCGACCGACGAGTAGCGCGAACGACCAAGCGCCGCGGCGCGATCGAGCCCGTGTAAGGC
ACCGAGGAGCGTCCGACGCC

Downstream 100 bases:

>100_bases
ACGCACCGTCACCGATCTTTCGAGGAGGCCACCTCATGAACGTCGCGATCCGCAAGGTTCCGTCCGAAGCCCACGCGCAG
CCGGTCGATGCGCTCGATCA

Product: Acyl-CoA dehydrogenase-like

Products: 2,3-dehydroacyl-CoA; reduced acceptor

Alternate protein names: Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase Short-Chain Specific; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase Protein; Acyl-CoA Dehydrogenase Domain Protein; Transmembrane Acyl-CoA Dehydrogenase; Acyl-CoA Dehydrogenase-Like Protein; Carnitine Operon Oxidoreductase; Acyl-Coa Dehydrogenase

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MAMITDNTLRNAAPTAPVSFRRDSVPLSQRVAQVAAIAAADADSVDKQSRFPRAAIDAAKAHGLLGAQIPVEFGGEGATI
HDVTEMCYALGRACASTAMIVAMHQTKVACLVRHGRGGDWHEQLMRRIAAEQMLLASSTTEGNNGGNIRASAAAIEVTDA
GVSLLRNATVISYGAEADGVMTIARRASEAAASDQVLVVFTSDDYTLTPTQGWETLGMRGTCSAGFELKASGLAAQVFAE
PYERIHAQTMTPVAHLSWSSAWAGIAAASVERAQGFIRKAARGAGGQMPPGAAHYTSAKMSLSKLRALISANLDAYAAHE
YDERGLGSLEFQSAINLLKVEASDLAVATVMSAMRACGLSGYRNDGDFTIGRHLRDVLSAPLMINNDRILANIATANLMS
AVPASLRD

Sequences:

>Translated_408_residues
MAMITDNTLRNAAPTAPVSFRRDSVPLSQRVAQVAAIAAADADSVDKQSRFPRAAIDAAKAHGLLGAQIPVEFGGEGATI
HDVTEMCYALGRACASTAMIVAMHQTKVACLVRHGRGGDWHEQLMRRIAAEQMLLASSTTEGNNGGNIRASAAAIEVTDA
GVSLLRNATVISYGAEADGVMTIARRASEAAASDQVLVVFTSDDYTLTPTQGWETLGMRGTCSAGFELKASGLAAQVFAE
PYERIHAQTMTPVAHLSWSSAWAGIAAASVERAQGFIRKAARGAGGQMPPGAAHYTSAKMSLSKLRALISANLDAYAAHE
YDERGLGSLEFQSAINLLKVEASDLAVATVMSAMRACGLSGYRNDGDFTIGRHLRDVLSAPLMINNDRILANIATANLMS
AVPASLRD
>Mature_407_residues
AMITDNTLRNAAPTAPVSFRRDSVPLSQRVAQVAAIAAADADSVDKQSRFPRAAIDAAKAHGLLGAQIPVEFGGEGATIH
DVTEMCYALGRACASTAMIVAMHQTKVACLVRHGRGGDWHEQLMRRIAAEQMLLASSTTEGNNGGNIRASAAAIEVTDAG
VSLLRNATVISYGAEADGVMTIARRASEAAASDQVLVVFTSDDYTLTPTQGWETLGMRGTCSAGFELKASGLAAQVFAEP
YERIHAQTMTPVAHLSWSSAWAGIAAASVERAQGFIRKAARGAGGQMPPGAAHYTSAKMSLSKLRALISANLDAYAAHEY
DERGLGSLEFQSAINLLKVEASDLAVATVMSAMRACGLSGYRNDGDFTIGRHLRDVLSAPLMINNDRILANIATANLMSA
VPASLRD

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.3

Molecular weight: Translated: 42878; Mature: 42747

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMITDNTLRNAAPTAPVSFRRDSVPLSQRVAQVAAIAAADADSVDKQSRFPRAAIDAAK
CCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHH
AHGLLGAQIPVEFGGEGATIHDVTEMCYALGRACASTAMIVAMHQTKVACLVRHGRGGDW
HCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEHHHHEEEEEECCCCCCH
HEQLMRRIAAEQMLLASSTTEGNNGGNIRASAAAIEVTDAGVSLLRNATVISYGAEADGV
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHCCEEEEECCCCCHH
MTIARRASEAAASDQVLVVFTSDDYTLTPTQGWETLGMRGTCSAGFELKASGLAAQVFAE
HHHHHHHHHHCCCCCEEEEEECCCEEECCCCCCHHCCCCCCCCCCCEEECCCCHHHHHHH
PYERIHAQTMTPVAHLSWSSAWAGIAAASVERAQGFIRKAARGAGGQMPPGAAHYTSAKM
HHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
SLSKLRALISANLDAYAAHEYDERGLGSLEFQSAINLLKVEASDLAVATVMSAMRACGLS
HHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHEEECHHHHHHHHHHHHHHHHCCC
GYRNDGDFTIGRHLRDVLSAPLMINNDRILANIATANLMSAVPASLRD
CCCCCCCEEHHHHHHHHHCCCEEECCCEEEEEHHHHHHHHHCCHHHCC
>Mature Secondary Structure 
AMITDNTLRNAAPTAPVSFRRDSVPLSQRVAQVAAIAAADADSVDKQSRFPRAAIDAAK
CEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHH
AHGLLGAQIPVEFGGEGATIHDVTEMCYALGRACASTAMIVAMHQTKVACLVRHGRGGDW
HCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEHHHHEEEEEECCCCCCH
HEQLMRRIAAEQMLLASSTTEGNNGGNIRASAAAIEVTDAGVSLLRNATVISYGAEADGV
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHCCEEEEECCCCCHH
MTIARRASEAAASDQVLVVFTSDDYTLTPTQGWETLGMRGTCSAGFELKASGLAAQVFAE
HHHHHHHHHHCCCCCEEEEEECCCEEECCCCCCHHCCCCCCCCCCCEEECCCCHHHHHHH
PYERIHAQTMTPVAHLSWSSAWAGIAAASVERAQGFIRKAARGAGGQMPPGAAHYTSAKM
HHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
SLSKLRALISANLDAYAAHEYDERGLGSLEFQSAINLLKVEASDLAVATVMSAMRACGLS
HHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHEEECHHHHHHHHHHHHHHHHCCC
GYRNDGDFTIGRHLRDVLSAPLMINNDRILANIATANLMSAVPASLRD
CCCCCCCEEHHHHHHHHHCCCEEECCCEEEEEHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: acyl-CoA; acceptor

Specific reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA