Click here to switch to the map view.

The map label for this gene is 86748047

Identifier: 86748047

GI number: 86748047

Start: 1064859

End: 1065473

Strand: Direct

Name: 86748047

Synonym: RPB_0921

Alternate gene names: NA

Gene position: 1064859-1065473 (Clockwise)

Preceding gene: 86748043

Following gene: 86748048

Centisome position: 19.97

GC content: 57.56

Gene sequence:

>615_bases
ATGACGGAAGACGATTGCAGAGCAGTGTTGGAGCGCATCCGGTGGCCTAACGGTCCCGAATGTCCTCATTGCGGGGTCGG
CAGTCCTTCGGTCGTGGCCATAGCGGGCAAATCGCACCGGCCGGGCCTGTATCTGTGCTCAGCTTGCCGACGCCAGTTCA
CTGTTACCGTTGGGACTCCACTGGAGGGCACGAAGCTTCCTCTCAAACTCTGGATTGGTGCTGCGCATCTGCTCAATTCA
CATCAGCCTATTGCGGTGAGGGAGATCGAGCGCGCCTTGGGCGTCACCTACAAGACTGCTTGGAAGGTCGTGCAGAGACT
TTTGGCGGGCGTTAAGAACTATGAGGGACCACTTCGAGTGTTTGGCGAGCCCGTGAGGGCGCACCTAAGGCCGCTTCGTC
CTGATGATCGCAATACGCTTCCCGCATGGAGGCGCGTGCAAAGGAAGATGATGCGGGGAAACTACCGAGCGCCTAGGGTG
CCAACTGCTTTGGGGGCGCTTCCGGCGCAGTTTTTTCCGTTGGCTACTCGCGCGCACCTTGAACGTACTGAATGCTTCAT
TTGTTGGATTATCGGAGTAGGAAAGGATGAGGCAGCAGATAGTGGACGACATTAG

Upstream 100 bases:

>100_bases
GGTGGTCTCACAATGACCGAAACCCATTGATTCAAAAGGCAATTATTGCTTTTGGCGTCGTCCCGCATATATACGAGACA
AAACAGCCTTTGAGGGCTTA

Downstream 100 bases:

>100_bases
GAAGCTGGCCAAAGCGAATGATGGAAAGCCTCCAGGGGTTGTTGCCTTTGAGCGCGCTACAGGAGTTCGTGAAGCCGCAT
GGCGCGGTGTCTATTGGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase; ISXo2 Transposase; ISXo5 Transposase; ISXo2 Transposase; Conserved Transposase; Unclassified Family Transposase

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MTEDDCRAVLERIRWPNGPECPHCGVGSPSVVAIAGKSHRPGLYLCSACRRQFTVTVGTPLEGTKLPLKLWIGAAHLLNS
HQPIAVREIERALGVTYKTAWKVVQRLLAGVKNYEGPLRVFGEPVRAHLRPLRPDDRNTLPAWRRVQRKMMRGNYRAPRV
PTALGALPAQFFPLATRAHLERTECFICWIIGVGKDEAADSGRH

Sequences:

>Translated_204_residues
MTEDDCRAVLERIRWPNGPECPHCGVGSPSVVAIAGKSHRPGLYLCSACRRQFTVTVGTPLEGTKLPLKLWIGAAHLLNS
HQPIAVREIERALGVTYKTAWKVVQRLLAGVKNYEGPLRVFGEPVRAHLRPLRPDDRNTLPAWRRVQRKMMRGNYRAPRV
PTALGALPAQFFPLATRAHLERTECFICWIIGVGKDEAADSGRH
>Mature_203_residues
TEDDCRAVLERIRWPNGPECPHCGVGSPSVVAIAGKSHRPGLYLCSACRRQFTVTVGTPLEGTKLPLKLWIGAAHLLNSH
QPIAVREIERALGVTYKTAWKVVQRLLAGVKNYEGPLRVFGEPVRAHLRPLRPDDRNTLPAWRRVQRKMMRGNYRAPRVP
TALGALPAQFFPLATRAHLERTECFICWIIGVGKDEAADSGRH

Specific function: Unknown

COG id: COG3677

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22785; Mature: 22654

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEDDCRAVLERIRWPNGPECPHCGVGSPSVVAIAGKSHRPGLYLCSACRRQFTVTVGTP
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHEEEEEECCC
LEGTKLPLKLWIGAAHLLNSHQPIAVREIERALGVTYKTAWKVVQRLLAGVKNYEGPLRV
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHH
FGEPVRAHLRPLRPDDRNTLPAWRRVQRKMMRGNYRAPRVPTALGALPAQFFPLATRAHL
CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ERTECFICWIIGVGKDEAADSGRH
HHCCEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TEDDCRAVLERIRWPNGPECPHCGVGSPSVVAIAGKSHRPGLYLCSACRRQFTVTVGTP
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHEEEEEECCC
LEGTKLPLKLWIGAAHLLNSHQPIAVREIERALGVTYKTAWKVVQRLLAGVKNYEGPLRV
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHH
FGEPVRAHLRPLRPDDRNTLPAWRRVQRKMMRGNYRAPRVPTALGALPAQFFPLATRAHL
CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ERTECFICWIIGVGKDEAADSGRH
HHCCEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA