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The map label for this gene is omp31 [H]

Identifier: 86748027

GI number: 86748027

Start: 1038118

End: 1040034

Strand: Direct

Name: omp31 [H]

Synonym: RPB_0901

Alternate gene names: 86748027

Gene position: 1038118-1040034 (Clockwise)

Preceding gene: 86748019

Following gene: 86748029

Centisome position: 19.47

GC content: 66.25

Gene sequence:

>1917_bases
ATGCAGAAGGCTCGGACACGAATTCTGGCTGGCTTCGCCTTCGCGATGGCGACCTCGGTTTCCACCGGCGCCGTTGCGGC
GTGTACCGGCACCGGCAGTTTCGTTCCGGGTCTGGTACCGGGCTTCAACCCGTCATCGGTTCTTCCATTCGCCGCCGGTG
GCGCGGTGAACTCGCTGGTCTCGGCGATCAACACGGCGAACACCGCGTTTCTCACCCAGTCGACCGCCTTCGTCAGCGCG
CCGGCGAGTCCGCGGCCGAATCAGGAAGGCGGCGGGGTCTGGACCCGCGCGATCGGCGGTGAGGTCACCACCAAATCGAC
CAGCACCACCACCAACGTCGCAGTCGGAGGCGTCGGCCTGCCCGGCACCGTGACCTGCGACAACGAGAACAAGCTCAGCT
TCGCCGGCGTCCAGGTCGGGGCCGATACCTCGGTCCTGAACTACAACGGCTGGAACCTGCATCTCGGCTCGACGGTGGGC
TATATCGGCGCCAAGTCGCGCGACAAATCGTCGGCCGGGGTGCTCAATCCGCTCGGCGGCACCTTCGAGGACACGCTGCA
GGTTCCGTTCGCGGGCGTCTATGTCGCCATGACCAAAGGCGGCTTCTTCGCCGACGGCCAGGTCCGCCTCGACTACTACC
AGAACTCGCTGAGCGACCCGATCGTCGGCGGCATTTTCGGCCAGAAGCTGGATGCCCGCGGCCTCTCCTTCACCGGCAAT
GTCGGCTACAATCACGCGCTGCAGAACAACTGGTTCATCGAGCCGTCGGCCGGCGTGGTGGTGTCGAAGGTCAAGGTCGA
TCCGCTCAACGTCACCGGTTCGCTGGTGCTGCCCGCGAGCTTCACCCCGGGCGTGACCTTCCCCGGCCAATTGCAGGTCG
ACGACATCAACAGCACGCTCGGTCGCTTCAGCCTGCGCGGCGGCACCAGCATCGCCTCGGGCAACATGATCTGGCAGCCC
TTCGCGATCGCCAGTGTGTATCACGAATTCAGGGGCGCGGTGACCTCGTCGTTCAACGGCGCGGCGGCGTCGGCGGCCAC
CGGTCTTCCGTCGGCGACCGGCAACATCTCCAGTTCCAACCTCGGCACTTACGGCCAGTTCGGCATCGGCGTCGCCGGTC
AACTCGTCAACACCGGCCTGCTCGGCTACATCCGCGCCGACTATCGCGCCGGCGAGAACATCGACGGCTACAGCTTCAAC
GGCGGCGTGCGCTATCAATTCGCCCCCGAGGCGGTGGCCGCGGCTCCGCTCTACACCAAGGCGGCGAAGGCGCCGATTCT
GGTTCACTCGGCCTACAACTGGACCGGCTTCTTCGTCGGCGGCAGCTTCGGCGTGCTGAACGGCCGCACCGACTGGACGT
TCCAGCCCGGCGGCACCACCACCGACCCGCGCTTCGCCGGCGCCATCGGCGGCGGCCAGATCGGCTACGACTATCAGTTC
GGCAAATGGGTGGTGGGCGTCGAGGGCGCGCTCAATGCGACCAACGCCAACGGCGCGCGGCCGTGCCCGTCCAGCGTGTT
CTTCACCTGCGAGACCAATGTCAGCTGGATGGGAACCGCGACCGCCAAGCTCGGCTATGCGTTCTGGGATCGCTCGCTGT
GGTACGTCCGCGGCGGCGGTGCCTTCGGCGACCTGAAGGTCACCACGACCTGCAACACCGGACCGTTCAACCCGCTCGGC
CTCGCGGGTTGCGGCGAGAACGCCAGCCGCAGCCGCGCCGGCTGGACCATCGGCATCGGCTCGGAATTCGCGCTCAGCAA
GAACTGGACGGTGCGGACCGAGACCAATTATTTCGACATGGGCCGCGAGCGCTACGTGCTGCCGACCTCGACGATCGACG
TCAAGCAGAACGGCTTCATCTCGACCGTCGGTGTGAACTATCGCTTCGCGCCGACCACGCTGGTCGCGAAATACTGA

Upstream 100 bases:

>100_bases
TCGCGCCGATTCCCGTGACTTAGAAATAATACGAAACATCCCGGCCGACTCGGCGACGGGGTTCCGCTGAAATGCACGTT
GTCGATGGGGGTCGATAGTT

Downstream 100 bases:

>100_bases
GCCCTGCTTTCCGGGCATCCCGGCCGAACAAGGCCCCGGCGCAAGCCGGGGCCTTTCGCGTTTGGTCACCGCCGGCGCGT
CGCGTGAAACGGGCGGTCGC

Product: outer membrane autotransporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 638; Mature: 638

Protein sequence:

>638_residues
MQKARTRILAGFAFAMATSVSTGAVAACTGTGSFVPGLVPGFNPSSVLPFAAGGAVNSLVSAINTANTAFLTQSTAFVSA
PASPRPNQEGGGVWTRAIGGEVTTKSTSTTTNVAVGGVGLPGTVTCDNENKLSFAGVQVGADTSVLNYNGWNLHLGSTVG
YIGAKSRDKSSAGVLNPLGGTFEDTLQVPFAGVYVAMTKGGFFADGQVRLDYYQNSLSDPIVGGIFGQKLDARGLSFTGN
VGYNHALQNNWFIEPSAGVVVSKVKVDPLNVTGSLVLPASFTPGVTFPGQLQVDDINSTLGRFSLRGGTSIASGNMIWQP
FAIASVYHEFRGAVTSSFNGAAASAATGLPSATGNISSSNLGTYGQFGIGVAGQLVNTGLLGYIRADYRAGENIDGYSFN
GGVRYQFAPEAVAAAPLYTKAAKAPILVHSAYNWTGFFVGGSFGVLNGRTDWTFQPGGTTTDPRFAGAIGGGQIGYDYQF
GKWVVGVEGALNATNANGARPCPSSVFFTCETNVSWMGTATAKLGYAFWDRSLWYVRGGGAFGDLKVTTTCNTGPFNPLG
LAGCGENASRSRAGWTIGIGSEFALSKNWTVRTETNYFDMGRERYVLPTSTIDVKQNGFISTVGVNYRFAPTTLVAKY

Sequences:

>Translated_638_residues
MQKARTRILAGFAFAMATSVSTGAVAACTGTGSFVPGLVPGFNPSSVLPFAAGGAVNSLVSAINTANTAFLTQSTAFVSA
PASPRPNQEGGGVWTRAIGGEVTTKSTSTTTNVAVGGVGLPGTVTCDNENKLSFAGVQVGADTSVLNYNGWNLHLGSTVG
YIGAKSRDKSSAGVLNPLGGTFEDTLQVPFAGVYVAMTKGGFFADGQVRLDYYQNSLSDPIVGGIFGQKLDARGLSFTGN
VGYNHALQNNWFIEPSAGVVVSKVKVDPLNVTGSLVLPASFTPGVTFPGQLQVDDINSTLGRFSLRGGTSIASGNMIWQP
FAIASVYHEFRGAVTSSFNGAAASAATGLPSATGNISSSNLGTYGQFGIGVAGQLVNTGLLGYIRADYRAGENIDGYSFN
GGVRYQFAPEAVAAAPLYTKAAKAPILVHSAYNWTGFFVGGSFGVLNGRTDWTFQPGGTTTDPRFAGAIGGGQIGYDYQF
GKWVVGVEGALNATNANGARPCPSSVFFTCETNVSWMGTATAKLGYAFWDRSLWYVRGGGAFGDLKVTTTCNTGPFNPLG
LAGCGENASRSRAGWTIGIGSEFALSKNWTVRTETNYFDMGRERYVLPTSTIDVKQNGFISTVGVNYRFAPTTLVAKY
>Mature_638_residues
MQKARTRILAGFAFAMATSVSTGAVAACTGTGSFVPGLVPGFNPSSVLPFAAGGAVNSLVSAINTANTAFLTQSTAFVSA
PASPRPNQEGGGVWTRAIGGEVTTKSTSTTTNVAVGGVGLPGTVTCDNENKLSFAGVQVGADTSVLNYNGWNLHLGSTVG
YIGAKSRDKSSAGVLNPLGGTFEDTLQVPFAGVYVAMTKGGFFADGQVRLDYYQNSLSDPIVGGIFGQKLDARGLSFTGN
VGYNHALQNNWFIEPSAGVVVSKVKVDPLNVTGSLVLPASFTPGVTFPGQLQVDDINSTLGRFSLRGGTSIASGNMIWQP
FAIASVYHEFRGAVTSSFNGAAASAATGLPSATGNISSSNLGTYGQFGIGVAGQLVNTGLLGYIRADYRAGENIDGYSFN
GGVRYQFAPEAVAAAPLYTKAAKAPILVHSAYNWTGFFVGGSFGVLNGRTDWTFQPGGTTTDPRFAGAIGGGQIGYDYQF
GKWVVGVEGALNATNANGARPCPSSVFFTCETNVSWMGTATAKLGYAFWDRSLWYVRGGGAFGDLKVTTTCNTGPFNPLG
LAGCGENASRSRAGWTIGIGSEFALSKNWTVRTETNYFDMGRERYVLPTSTIDVKQNGFISTVGVNYRFAPTTLVAKY

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 66300; Mature: 66300

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKARTRILAGFAFAMATSVSTGAVAACTGTGSFVPGLVPGFNPSSVLPFAAGGAVNSLV
CCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEECCHHHHHHH
SAINTANTAFLTQSTAFVSAPASPRPNQEGGGVWTRAIGGEVTTKSTSTTTNVAVGGVGL
HHHHCCCEEEEEECCEEEECCCCCCCCCCCCCEEEEECCCEEEECCCCCCCEEEECCCCC
PGTVTCDNENKLSFAGVQVGADTSVLNYNGWNLHLGSTVGYIGAKSRDKSSAGVLNPLGG
CCEEEECCCCCEEEEEEEECCCCEEEEECCEEEEECCEEEECCCCCCCCCCCCCCCCCCC
TFEDTLQVPFAGVYVAMTKGGFFADGQVRLDYYQNSLSDPIVGGIFGQKLDARGLSFTGN
CHHHHCCCCCCEEEEEEECCCEEECCEEEEEEECCCCCCCCEECHHCCCCCCCCCEEECC
VGYNHALQNNWFIEPSAGVVVSKVKVDPLNVTGSLVLPASFTPGVTFPGQLQVDDINSTL
CCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCH
GRFSLRGGTSIASGNMIWQPFAIASVYHEFRGAVTSSFNGAAASAATGLPSATGNISSSN
HEEEECCCCEEECCCEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCC
LGTYGQFGIGVAGQLVNTGLLGYIRADYRAGENIDGYSFNGGVRYQFAPEAVAAAPLYTK
CCCCCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCEECCCCEEEEECCHHHHCCCCHHH
AAKAPILVHSAYNWTGFFVGGSFGVLNGRTDWTFQPGGTTTDPRFAGAIGGGQIGYDYQF
HCCCCEEEEECCCEEEEEECCEEEEECCCCCEEECCCCCCCCCCEEECCCCCCCCEEEEC
GKWVVGVEGALNATNANGARPCPSSVFFTCETNVSWMGTATAKLGYAFWDRSLWYVRGGG
CCEEEEECCCEECCCCCCCCCCCCCEEEEEECCCEEEEEHHHHHEEEEECCEEEEEECCC
AFGDLKVTTTCNTGPFNPLGLAGCGENASRSRAGWTIGIGSEFALSKNWTVRTETNYFDM
CEEEEEEEEEECCCCCCCCCEECCCCCCCCCCCCEEEECCCCEEECCCCEEEEECCHHHC
GRERYVLPTSTIDVKQNGFISTVGVNYRFAPTTLVAKY
CCCEEEECCCEEEECCCCEEEEEECCEEECCCEEEEEC
>Mature Secondary Structure
MQKARTRILAGFAFAMATSVSTGAVAACTGTGSFVPGLVPGFNPSSVLPFAAGGAVNSLV
CCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEECCHHHHHHH
SAINTANTAFLTQSTAFVSAPASPRPNQEGGGVWTRAIGGEVTTKSTSTTTNVAVGGVGL
HHHHCCCEEEEEECCEEEECCCCCCCCCCCCCEEEEECCCEEEECCCCCCCEEEECCCCC
PGTVTCDNENKLSFAGVQVGADTSVLNYNGWNLHLGSTVGYIGAKSRDKSSAGVLNPLGG
CCEEEECCCCCEEEEEEEECCCCEEEEECCEEEEECCEEEECCCCCCCCCCCCCCCCCCC
TFEDTLQVPFAGVYVAMTKGGFFADGQVRLDYYQNSLSDPIVGGIFGQKLDARGLSFTGN
CHHHHCCCCCCEEEEEEECCCEEECCEEEEEEECCCCCCCCEECHHCCCCCCCCCEEECC
VGYNHALQNNWFIEPSAGVVVSKVKVDPLNVTGSLVLPASFTPGVTFPGQLQVDDINSTL
CCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCH
GRFSLRGGTSIASGNMIWQPFAIASVYHEFRGAVTSSFNGAAASAATGLPSATGNISSSN
HEEEECCCCEEECCCEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCC
LGTYGQFGIGVAGQLVNTGLLGYIRADYRAGENIDGYSFNGGVRYQFAPEAVAAAPLYTK
CCCCCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCEECCCCEEEEECCHHHHCCCCHHH
AAKAPILVHSAYNWTGFFVGGSFGVLNGRTDWTFQPGGTTTDPRFAGAIGGGQIGYDYQF
HCCCCEEEEECCCEEEEEECCEEEEECCCCCEEECCCCCCCCCCEEECCCCCCCCEEEEC
GKWVVGVEGALNATNANGARPCPSSVFFTCETNVSWMGTATAKLGYAFWDRSLWYVRGGG
CCEEEEECCCEECCCCCCCCCCCCCEEEEEECCCEEEEEHHHHHEEEEECCEEEEEECCC
AFGDLKVTTTCNTGPFNPLGLAGCGENASRSRAGWTIGIGSEFALSKNWTVRTETNYFDM
CEEEEEEEEEECCCCCCCCCEECCCCCCCCCCCCEEEECCCCEEECCCCEEEEECCHHHC
GRERYVLPTSTIDVKQNGFISTVGVNYRFAPTTLVAKY
CCCEEEECCCEEEECCCCEEEEEECCEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]