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The map label for this gene is 86748025

Identifier: 86748025

GI number: 86748025

Start: 1034573

End: 1036714

Strand: Reverse

Name: 86748025

Synonym: RPB_0899

Alternate gene names: NA

Gene position: 1036714-1034573 (Counterclockwise)

Preceding gene: 86748026

Following gene: 86748024

Centisome position: 19.44

GC content: 69.37

Gene sequence:

>2142_bases
ATGATCGAGCGTCTTGGTCCGATTGCGACGACGATTGGCGCAGCCATCCTGGCGATGGCGGTGTCGTGCGGCGTTGCGCT
GGCCGACGCCAAACGTGTCGCGATGGTGGTCGGCAACTCGCTGTATCAGAGCGTCCCGCAGCTTCCCAACCCGTCGCGCG
ACGCCGACGCCGTCGCGCGGATGTTCAAGGATTCCGGCTTCGACGTCACCCGGGTGATCAACGCCGGCAACCTCGATTTC
AAGCGCGCGATCCGCAAATTCGAGACCGATGCCGACCAGGCCGACGTCGCCGTGATCTACTACGCCGGCCACGGCATCGA
GATCAGCGGAACCAACTATCTGATCCCGATCGACGCCCGGCTGGCCAGCGACCGCGACGCCGAGGACGAGGCGATACCGC
TCGAGCGCCTGGTGTCGTCCGCCGACGGCGCGCAGAAGCTGCGGGTGGTGATCCTCGACGCCTGTCGCGACAACCCGTTC
ACGGTGCGGATGCGGCGCGAAAGGAAGGTGGCGAGCCGCAACGTCGTGTCCGGCCTCGGCAAGGTCGAACCGACCAGCAC
CGATACGCTGATCGCCTATGCGGCGAAGGCCGGCTCCACCGCGGAAGACGGGACCGGCGATCACAGCCCGTTCACGACCG
CCATCCTGAAGAACCTCACCGTGCCCGGGCTCGACATCCGGCTCGCCTTCGGCCGGGTCCGCGACGAGGTGATGAAGGCC
ACCGGCAACAAGCAGGAGCCGTTCGTGTACGGCTCGCTCGGCGGCGGCAACGTGTCGCTGGTGCCGGCGCCGGCAGTGAC
GCAGGAGGCGACCGCCAGCGACGTCAAGGCCGACTACGATCTGGTCGCCAGGATCGGCTCGCGCCGCGCCTGGGAGGTGT
TCCTCGCCACTTACAAGACCGGCTTCTATGCCGATCTGGCCCGCGCCCAGATCGCGAGTCTGACCGATCAGGTCCCGAGC
GGCGAGCCCCCGTCGGCGGCAGGCCAGATCACGACCGCGGCGGTCGATCCCGGCACGCCGGCGCCGGGGCGCGAAGTGAG
TTCCCGGGAGGCGCTGGACTGGGATCGCGTCAAGGACAGCAACGACATTGCGGCGCTGCAGAAATTCATCAAGCGATATC
CGGATTCGCCGCGGTCGATCGCCGCGCAGAGCCGCGTCGAATTGCTGCAGCAGATCGCCCGCGAGCGGGAGCAGCGCGCC
CGCGCCGAGCGCGAGGCCGCGGCGCGGGCGGCGGAACTGGCGAAGCTCCAGGCCGCGCAGAAAAAGGCCGAGGAAGCCGC
CACGCGCCAGCGCGAGCAGGACGAACGCCGCGCCCAGAAAGCCGAGGCCGAGGCCAAAGCCAAGGCGGAGGACGCCGAGC
GCAAGGCGGCCGAAGCCAAGCGCAAGGCCGACGAGGCCGACCGTCAGAAGTCCGCCCAGGAAGCCGCGGCGCTGCGCGCG
GAAAGTGAAAAGCGCGCCAGGCAGGCCGAGGACGAGCGGCGCAAGGCCGCGGAGGCGGCCATTCAGGAGACCGTCTGCAA
GGATCAGCAGGCCCAATTCGACGCGCTCAACAGCAAGAGCGACGCGCCCTCGGCGCTCGACGATATGAAGGTGTTGGCCA
AATCGATCACCTGCAGCCGGCTGCAGCCGATGGTCGCCATGGCGATCGACCGGCTGAAGCTCGAAGCCGACAAGCGCGCC
GCCGCGATGCCGAACTCGCCGCAACTCGTTCGCTCCGCGCAGACCGAACTGGCGCGGATCGGCTGCCTGACCGACAAGCC
GAACGGCGTGCTCGGCGACCCGACCAGGACGGCGCTGGGGCGCTATTTGAGCATCAAGGGACAATCATCGAGCGATCTCA
GCGTGACAGAGGCGCTGGTGGCGGACCTCGGCAAGCAATCGGGCCGGGTGTGCCCGCTGGTGTGCAAAGCGGGCGAGATC
GCCAAGGGCGATGCTTGTATCGCGAGCGAGAAGCGCGACGAGCCGAAAGCGGCGGCGCGCCGCCAGCGCGACGACGAAGA
CGACCGCGCGGCGCGGCGCAAGCCGGCCCGCCGCGAAGCGCAACAGGAGCGTCGTCAGTCGCGGCCCGAACCGCGCGCCC
GGCAGCAGGCGACGTCGCGGCCGAGCGGCGGCGCCGCCGCGATGATCGGCGTCGGCTTCTGA

Upstream 100 bases:

>100_bases
AGGTGCGTCGGAGTCGACGTACATCACAGATAACTCACTTAACGTTCCGTCCCGAATCCATGGGGATCTGCCCGGCGAGG
AGCCGCACCCAGGAAGCGAC

Downstream 100 bases:

>100_bases
GCGCGGGTCGACCGAACTGATCGATCCGGCAGCAGCGCCGGACGAGGCCAGCAGATCCGGCACCGTCGATGCCGGACGGG
CGTGAAAGAGGTGATCGATG

Product: peptidase C14, caspase catalytic subunit p20

Products: NA

Alternate protein names: Caspase Domain Protein; Caspase-Like Domain- And TPR Repeat-Containing Peptidase; Peptidase C; Caspase-Like Domain-Containing Protein; Peptidase Protein; Caspase Domain-Containing Protein; TPR Repeat-Containing Caspace; GUN4-Like Family; Caspase; Peptidylprolyl Isomerase; Caspase-1 P; ICE-Like Protease; Paracaspase

Number of amino acids: Translated: 713; Mature: 713

Protein sequence:

>713_residues
MIERLGPIATTIGAAILAMAVSCGVALADAKRVAMVVGNSLYQSVPQLPNPSRDADAVARMFKDSGFDVTRVINAGNLDF
KRAIRKFETDADQADVAVIYYAGHGIEISGTNYLIPIDARLASDRDAEDEAIPLERLVSSADGAQKLRVVILDACRDNPF
TVRMRRERKVASRNVVSGLGKVEPTSTDTLIAYAAKAGSTAEDGTGDHSPFTTAILKNLTVPGLDIRLAFGRVRDEVMKA
TGNKQEPFVYGSLGGGNVSLVPAPAVTQEATASDVKADYDLVARIGSRRAWEVFLATYKTGFYADLARAQIASLTDQVPS
GEPPSAAGQITTAAVDPGTPAPGREVSSREALDWDRVKDSNDIAALQKFIKRYPDSPRSIAAQSRVELLQQIAREREQRA
RAEREAAARAAELAKLQAAQKKAEEAATRQREQDERRAQKAEAEAKAKAEDAERKAAEAKRKADEADRQKSAQEAAALRA
ESEKRARQAEDERRKAAEAAIQETVCKDQQAQFDALNSKSDAPSALDDMKVLAKSITCSRLQPMVAMAIDRLKLEADKRA
AAMPNSPQLVRSAQTELARIGCLTDKPNGVLGDPTRTALGRYLSIKGQSSSDLSVTEALVADLGKQSGRVCPLVCKAGEI
AKGDACIASEKRDEPKAAARRQRDDEDDRAARRKPARREAQQERRQSRPEPRARQQATSRPSGGAAAMIGVGF

Sequences:

>Translated_713_residues
MIERLGPIATTIGAAILAMAVSCGVALADAKRVAMVVGNSLYQSVPQLPNPSRDADAVARMFKDSGFDVTRVINAGNLDF
KRAIRKFETDADQADVAVIYYAGHGIEISGTNYLIPIDARLASDRDAEDEAIPLERLVSSADGAQKLRVVILDACRDNPF
TVRMRRERKVASRNVVSGLGKVEPTSTDTLIAYAAKAGSTAEDGTGDHSPFTTAILKNLTVPGLDIRLAFGRVRDEVMKA
TGNKQEPFVYGSLGGGNVSLVPAPAVTQEATASDVKADYDLVARIGSRRAWEVFLATYKTGFYADLARAQIASLTDQVPS
GEPPSAAGQITTAAVDPGTPAPGREVSSREALDWDRVKDSNDIAALQKFIKRYPDSPRSIAAQSRVELLQQIAREREQRA
RAEREAAARAAELAKLQAAQKKAEEAATRQREQDERRAQKAEAEAKAKAEDAERKAAEAKRKADEADRQKSAQEAAALRA
ESEKRARQAEDERRKAAEAAIQETVCKDQQAQFDALNSKSDAPSALDDMKVLAKSITCSRLQPMVAMAIDRLKLEADKRA
AAMPNSPQLVRSAQTELARIGCLTDKPNGVLGDPTRTALGRYLSIKGQSSSDLSVTEALVADLGKQSGRVCPLVCKAGEI
AKGDACIASEKRDEPKAAARRQRDDEDDRAARRKPARREAQQERRQSRPEPRARQQATSRPSGGAAAMIGVGF
>Mature_713_residues
MIERLGPIATTIGAAILAMAVSCGVALADAKRVAMVVGNSLYQSVPQLPNPSRDADAVARMFKDSGFDVTRVINAGNLDF
KRAIRKFETDADQADVAVIYYAGHGIEISGTNYLIPIDARLASDRDAEDEAIPLERLVSSADGAQKLRVVILDACRDNPF
TVRMRRERKVASRNVVSGLGKVEPTSTDTLIAYAAKAGSTAEDGTGDHSPFTTAILKNLTVPGLDIRLAFGRVRDEVMKA
TGNKQEPFVYGSLGGGNVSLVPAPAVTQEATASDVKADYDLVARIGSRRAWEVFLATYKTGFYADLARAQIASLTDQVPS
GEPPSAAGQITTAAVDPGTPAPGREVSSREALDWDRVKDSNDIAALQKFIKRYPDSPRSIAAQSRVELLQQIAREREQRA
RAEREAAARAAELAKLQAAQKKAEEAATRQREQDERRAQKAEAEAKAKAEDAERKAAEAKRKADEADRQKSAQEAAALRA
ESEKRARQAEDERRKAAEAAIQETVCKDQQAQFDALNSKSDAPSALDDMKVLAKSITCSRLQPMVAMAIDRLKLEADKRA
AAMPNSPQLVRSAQTELARIGCLTDKPNGVLGDPTRTALGRYLSIKGQSSSDLSVTEALVADLGKQSGRVCPLVCKAGEI
AKGDACIASEKRDEPKAAARRQRDDEDDRAARRKPARREAQQERRQSRPEPRARQQATSRPSGGAAAMIGVGF

Specific function: Unknown

COG id: COG4249

COG function: function code R; Uncharacterized protein containing caspase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76852; Mature: 76852

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50208 CASPASE_P20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIERLGPIATTIGAAILAMAVSCGVALADAKRVAMVVGNSLYQSVPQLPNPSRDADAVAR
CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHH
MFKDSGFDVTRVINAGNLDFKRAIRKFETDADQADVAVIYYAGHGIEISGTNYLIPIDAR
HHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCEEEEEECCH
LASDRDAEDEAIPLERLVSSADGAQKLRVVILDACRDNPFTVRMRRERKVASRNVVSGLG
HCCCCCCCCCCCCHHHHHHCCCCHHHEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHCC
KVEPTSTDTLIAYAAKAGSTAEDGTGDHSPFTTAILKNLTVPGLDIRLAFGRVRDEVMKA
CCCCCCCCHHHEEHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHH
TGNKQEPFVYGSLGGGNVSLVPAPAVTQEATASDVKADYDLVARIGSRRAWEVFLATYKT
CCCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
GFYADLARAQIASLTDQVPSGEPPSAAGQITTAAVDPGTPAPGREVSSREALDWDRVKDS
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCC
NDIAALQKFIKRYPDSPRSIAAQSRVELLQQIAREREQRARAEREAAARAAELAKLQAAQ
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKAEEAATRQREQDERRAQKAEAEAKAKAEDAERKAAEAKRKADEADRQKSAQEAAALRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESEKRARQAEDERRKAAEAAIQETVCKDQQAQFDALNSKSDAPSALDDMKVLAKSITCSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
LQPMVAMAIDRLKLEADKRAAAMPNSPQLVRSAQTELARIGCLTDKPNGVLGDPTRTALG
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHC
RYLSIKGQSSSDLSVTEALVADLGKQSGRVCPLVCKAGEIAKGDACIASEKRDEPKAAAR
CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCCCCCCCHHHHHH
RQRDDEDDRAARRKPARREAQQERRQSRPEPRARQQATSRPSGGAAAMIGVGF
HCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEEECCC
>Mature Secondary Structure
MIERLGPIATTIGAAILAMAVSCGVALADAKRVAMVVGNSLYQSVPQLPNPSRDADAVAR
CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHH
MFKDSGFDVTRVINAGNLDFKRAIRKFETDADQADVAVIYYAGHGIEISGTNYLIPIDAR
HHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCEEEEEECCH
LASDRDAEDEAIPLERLVSSADGAQKLRVVILDACRDNPFTVRMRRERKVASRNVVSGLG
HCCCCCCCCCCCCHHHHHHCCCCHHHEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHCC
KVEPTSTDTLIAYAAKAGSTAEDGTGDHSPFTTAILKNLTVPGLDIRLAFGRVRDEVMKA
CCCCCCCCHHHEEHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHH
TGNKQEPFVYGSLGGGNVSLVPAPAVTQEATASDVKADYDLVARIGSRRAWEVFLATYKT
CCCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
GFYADLARAQIASLTDQVPSGEPPSAAGQITTAAVDPGTPAPGREVSSREALDWDRVKDS
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCC
NDIAALQKFIKRYPDSPRSIAAQSRVELLQQIAREREQRARAEREAAARAAELAKLQAAQ
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKAEEAATRQREQDERRAQKAEAEAKAKAEDAERKAAEAKRKADEADRQKSAQEAAALRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESEKRARQAEDERRKAAEAAIQETVCKDQQAQFDALNSKSDAPSALDDMKVLAKSITCSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
LQPMVAMAIDRLKLEADKRAAAMPNSPQLVRSAQTELARIGCLTDKPNGVLGDPTRTALG
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHC
RYLSIKGQSSSDLSVTEALVADLGKQSGRVCPLVCKAGEIAKGDACIASEKRDEPKAAAR
CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCCCCCCCHHHHHH
RQRDDEDDRAARRKPARREAQQERRQSRPEPRARQQATSRPSGGAAAMIGVGF
HCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA