| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747989
Identifier: 86747989
GI number: 86747989
Start: 993089
End: 993865
Strand: Reverse
Name: 86747989
Synonym: RPB_0863
Alternate gene names: NA
Gene position: 993865-993089 (Counterclockwise)
Preceding gene: 86747990
Following gene: 86747986
Centisome position: 18.64
GC content: 69.63
Gene sequence:
>777_bases TTGACGAAAGCAGCGACCCTTCTGGCTCTGGTGTGCCTCCTGATCGCGGGCGCCTCGGCCGCGACCATCCTGGCGCGCGA CAGCGTTCCGGCCGCCGGCCTGGCGATGGCAGGCCCCGCGATGGCAGCTCCGGCGGCGATCGCGAGCCCGGTGAGCAACC GGGAAACCAAGTCCGACAGACTGGCGTCTGCGGTCGCTCCCTCCGACTTGTCGTTGCCCGCATTGTTGTCGTCCGCACCG CTGCTGGCCGATCCGTCGGCAGAGGCCGCCGTGCCCGATCTCGCCGGACAACAGGTCCCGTCGCCGCAGAAGCCGATCCA ACTGGCCTATGCGGCCGACGACAGCGGCGACCTCGCGGTCGGCGCGCTGCCCGATGCGGCCGACAAGGCCGCCAATTCGG CCCCGGTCACCAGTCTCCCGCCGGTGATCGCCACCGCGCCGGTGCAGAAGCCGAAGCCGGCCGCCAAGCCGAAGCCGCCG GCGCTGCTCAGCGATGCGCAGATTTCCCAGCTCCGCGGCCGCCTCAATTTGTCATCGTCGCAGGAATATTACTGGCCCTC GGTCGAGCAGGCGCTACGCGCGATCGGCCGCAAGCTGCATGCGACCCGCACTGTCGCCGACAGCGGCCCGCCGCCGATCG ATCCGGACAGCGCCGAAGTCCAGCAACTGAAATACGCCGCGATGCCGCTGCTGTTCCAGCTGCGCGAAGACCAGAAGCAG GAAGTCCGCAAACTCGCCCGCGCCATGGGGCTGGAGCAGGTCGCGCAGGCGATCTGA
Upstream 100 bases:
>100_bases GCCCGACGCGGGCCGCCCGACACCGGTATCCGGTGCCGGGCCATATTTCCTCTGCATTTATGCGCGATATGGACAGGCGT TCGTCGCGACGGAGATGAGC
Downstream 100 bases:
>100_bases GCGGCGCCGGCCGGCGTTCATGGCCGGCGTTGCAGAACAACTCCCGCAAGCACAACTCCCGCAAGCGTCATCCTGAGGTG CTCGCCCGCGAGGGCGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MTKAATLLALVCLLIAGASAATILARDSVPAAGLAMAGPAMAAPAAIASPVSNRETKSDRLASAVAPSDLSLPALLSSAP LLADPSAEAAVPDLAGQQVPSPQKPIQLAYAADDSGDLAVGALPDAADKAANSAPVTSLPPVIATAPVQKPKPAAKPKPP ALLSDAQISQLRGRLNLSSSQEYYWPSVEQALRAIGRKLHATRTVADSGPPPIDPDSAEVQQLKYAAMPLLFQLREDQKQ EVRKLARAMGLEQVAQAI
Sequences:
>Translated_258_residues MTKAATLLALVCLLIAGASAATILARDSVPAAGLAMAGPAMAAPAAIASPVSNRETKSDRLASAVAPSDLSLPALLSSAP LLADPSAEAAVPDLAGQQVPSPQKPIQLAYAADDSGDLAVGALPDAADKAANSAPVTSLPPVIATAPVQKPKPAAKPKPP ALLSDAQISQLRGRLNLSSSQEYYWPSVEQALRAIGRKLHATRTVADSGPPPIDPDSAEVQQLKYAAMPLLFQLREDQKQ EVRKLARAMGLEQVAQAI >Mature_257_residues TKAATLLALVCLLIAGASAATILARDSVPAAGLAMAGPAMAAPAAIASPVSNRETKSDRLASAVAPSDLSLPALLSSAPL LADPSAEAAVPDLAGQQVPSPQKPIQLAYAADDSGDLAVGALPDAADKAANSAPVTSLPPVIATAPVQKPKPAAKPKPPA LLSDAQISQLRGRLNLSSSQEYYWPSVEQALRAIGRKLHATRTVADSGPPPIDPDSAEVQQLKYAAMPLLFQLREDQKQE VRKLARAMGLEQVAQAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26446; Mature: 26314
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKAATLLALVCLLIAGASAATILARDSVPAAGLAMAGPAMAAPAAIASPVSNRETKSDR CCHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCHHHCCCHHHCCHHHHCCCCCCCHHHHH LASAVAPSDLSLPALLSSAPLLADPSAEAAVPDLAGQQVPSPQKPIQLAYAADDSGDLAV HHHHCCCCCCCHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEEE GALPDAADKAANSAPVTSLPPVIATAPVQKPKPAAKPKPPALLSDAQISQLRGRLNLSSS ECCCCHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHCHHHHHHHHHHCCCCCC QEYYWPSVEQALRAIGRKLHATRTVADSGPPPIDPDSAEVQQLKYAAMPLLFQLREDQKQ CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EVRKLARAMGLEQVAQAI HHHHHHHHHCHHHHHHHC >Mature Secondary Structure TKAATLLALVCLLIAGASAATILARDSVPAAGLAMAGPAMAAPAAIASPVSNRETKSDR CHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCHHHCCCHHHCCHHHHCCCCCCCHHHHH LASAVAPSDLSLPALLSSAPLLADPSAEAAVPDLAGQQVPSPQKPIQLAYAADDSGDLAV HHHHCCCCCCCHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEEE GALPDAADKAANSAPVTSLPPVIATAPVQKPKPAAKPKPPALLSDAQISQLRGRLNLSSS ECCCCHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHCHHHHHHHHHHCCCCCC QEYYWPSVEQALRAIGRKLHATRTVADSGPPPIDPDSAEVQQLKYAAMPLLFQLREDQKQ CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EVRKLARAMGLEQVAQAI HHHHHHHHHCHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA