Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86747986

Identifier: 86747986

GI number: 86747986

Start: 984404

End: 985372

Strand: Reverse

Name: 86747986

Synonym: RPB_0860

Alternate gene names: NA

Gene position: 985372-984404 (Counterclockwise)

Preceding gene: 86747989

Following gene: 86747981

Centisome position: 18.48

GC content: 71.83

Gene sequence:

>969_bases
ATGGTAGGGGTCGCAGGGGCGGATTTCCAGCAGGACCTTCTGTTCGCGTTCGGTGGCGGAGATCCGCAGATCACCATCGC
GGTGCTGGATGGGCCGGTGGATCGCACACATGATTGTTTTCGCGGCGCGCGGCTGGCTCCGCTCGACACGCCGGCTGCGG
CGCGATGCGCCGAGGAATTCGCCAGCGCGCAGGGCACGCATCTGGCGAGTCTGATTTTCGGCCAGCCCTGCAGTTCGGTC
GAAGGCGTCGCGCCGCTCTGCCGCGGGCTGATCGCACCGATCTTCGGCGACGACCGGCCGGGCTGCTCCCAGACCGATCT
GGCGCAGGCGATCGTGATGGCGCTGGATCACGGCGCCCACATCCTCCACATCAGCGGCGGATTGTTCGACGGGCGGCGGC
AGCCGACCGCCGAACTGAGCGCGGCCGTGGCGCTGTGCAACGACCACAACGCGCTGATCGTCGCCGGCGCCGGCCGCGAT
GGCTGCGCCAGCCTGCTGCGCCGCTGCGGCGCGGTGAATCTTCTCCCGGTGGGCGCGATCGACAGAAACGGCCGGCTGAT
CGGCGGCAGCGACGCCAGCCTGCACGAGATCGGCATCGCGGTCCCCGGCGCCAGGCTGATCGGCGCGACGCTGGAAGGCG
GCATCGGCGAGCGCCGCGGCGCGAACTACTCGGCCGCTTTGATCGCCGGCATTGCCGGGCTGCTGCTCGGGACGCAGACC
GCCACCGGCCGGGCCCACGACCCCGGCGCGGCCATCGAGGCGATCCTCGGCAGCGCGACGCCGCGGCTCGCGGCGCGGGC
CGACGAATGCCAGCGCGCCTGGATCGGCCGGGCAAATGTCGAAGCCGCCGCGGCCCGCCTCACCGGCGTGATGTTCGACA
GTGCCGCGACGTCTCCGTTCGGACTGTGGCATCGGGCGCTGACGAATGCGCAGCCGTCGGACCACGCCACGTTCCGGCCG
CGGGCGTGA

Upstream 100 bases:

>100_bases
CTCGGAGTTGGCCGCTGGAGCTGCAGGGCGGGTCGTGCGCGGACTTTATGCGAGCAAGTCGCATGTCGCGGAACGGCGGA
GTTAGTAAGGGCGGGGTGAA

Downstream 100 bases:

>100_bases
CCGCGCCGGGCTTTGCGCGCGGACCAGCGTGACTTCGCAGCTTCGCATGGTCGGATCGTCGGGGCGGACCGCAATGGTTA
CGATGCAGAGTCGCGCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase PatA-Like Protein; Subtilase Family Protease; Peptidase S8/S53 Subtilisin Kexin Sedolisin

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MVGVAGADFQQDLLFAFGGGDPQITIAVLDGPVDRTHDCFRGARLAPLDTPAAARCAEEFASAQGTHLASLIFGQPCSSV
EGVAPLCRGLIAPIFGDDRPGCSQTDLAQAIVMALDHGAHILHISGGLFDGRRQPTAELSAAVALCNDHNALIVAGAGRD
GCASLLRRCGAVNLLPVGAIDRNGRLIGGSDASLHEIGIAVPGARLIGATLEGGIGERRGANYSAALIAGIAGLLLGTQT
ATGRAHDPGAAIEAILGSATPRLAARADECQRAWIGRANVEAAAARLTGVMFDSAATSPFGLWHRALTNAQPSDHATFRP
RA

Sequences:

>Translated_322_residues
MVGVAGADFQQDLLFAFGGGDPQITIAVLDGPVDRTHDCFRGARLAPLDTPAAARCAEEFASAQGTHLASLIFGQPCSSV
EGVAPLCRGLIAPIFGDDRPGCSQTDLAQAIVMALDHGAHILHISGGLFDGRRQPTAELSAAVALCNDHNALIVAGAGRD
GCASLLRRCGAVNLLPVGAIDRNGRLIGGSDASLHEIGIAVPGARLIGATLEGGIGERRGANYSAALIAGIAGLLLGTQT
ATGRAHDPGAAIEAILGSATPRLAARADECQRAWIGRANVEAAAARLTGVMFDSAATSPFGLWHRALTNAQPSDHATFRP
RA
>Mature_322_residues
MVGVAGADFQQDLLFAFGGGDPQITIAVLDGPVDRTHDCFRGARLAPLDTPAAARCAEEFASAQGTHLASLIFGQPCSSV
EGVAPLCRGLIAPIFGDDRPGCSQTDLAQAIVMALDHGAHILHISGGLFDGRRQPTAELSAAVALCNDHNALIVAGAGRD
GCASLLRRCGAVNLLPVGAIDRNGRLIGGSDASLHEIGIAVPGARLIGATLEGGIGERRGANYSAALIAGIAGLLLGTQT
ATGRAHDPGAAIEAILGSATPRLAARADECQRAWIGRANVEAAAARLTGVMFDSAATSPFGLWHRALTNAQPSDHATFRP
RA

Specific function: Unknown

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32867; Mature: 32867

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGVAGADFQQDLLFAFGGGDPQITIAVLDGPVDRTHDCFRGARLAPLDTPAAARCAEEF
CCCCCCCCHHHCEEEEECCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCHHHHHHHHH
ASAQGTHLASLIFGQPCSSVEGVAPLCRGLIAPIFGDDRPGCSQTDLAQAIVMALDHGAH
HHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCE
ILHISGGLFDGRRQPTAELSAAVALCNDHNALIVAGAGRDGCASLLRRCGAVNLLPVGAI
EEEEECCCCCCCCCCHHHHHHHHHEECCCCEEEEEECCCHHHHHHHHHCCCCCEEEECEE
DRNGRLIGGSDASLHEIGIAVPGARLIGATLEGGIGERRGANYSAALIAGIAGLLLGTQT
CCCCEEECCCCCCHHHEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
ATGRAHDPGAAIEAILGSATPRLAARADECQRAWIGRANVEAAAARLTGVMFDSAATSPF
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHH
GLWHRALTNAQPSDHATFRPRA
HHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVGVAGADFQQDLLFAFGGGDPQITIAVLDGPVDRTHDCFRGARLAPLDTPAAARCAEEF
CCCCCCCCHHHCEEEEECCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCHHHHHHHHH
ASAQGTHLASLIFGQPCSSVEGVAPLCRGLIAPIFGDDRPGCSQTDLAQAIVMALDHGAH
HHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCE
ILHISGGLFDGRRQPTAELSAAVALCNDHNALIVAGAGRDGCASLLRRCGAVNLLPVGAI
EEEEECCCCCCCCCCHHHHHHHHHEECCCCEEEEEECCCHHHHHHHHHCCCCCEEEECEE
DRNGRLIGGSDASLHEIGIAVPGARLIGATLEGGIGERRGANYSAALIAGIAGLLLGTQT
CCCCEEECCCCCCHHHEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
ATGRAHDPGAAIEAILGSATPRLAARADECQRAWIGRANVEAAAARLTGVMFDSAATSPF
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHH
GLWHRALTNAQPSDHATFRPRA
HHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA