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The map label for this gene is 86747939

Identifier: 86747939

GI number: 86747939

Start: 930040

End: 930762

Strand: Reverse

Name: 86747939

Synonym: RPB_0813

Alternate gene names: NA

Gene position: 930762-930040 (Counterclockwise)

Preceding gene: 86747942

Following gene: 86747938

Centisome position: 17.46

GC content: 70.12

Gene sequence:

>723_bases
ATGGATGCGCGGGTCAAGCCCGCGCATGACGGCGCCAGCGAGTTGAAGAGCACCATGACCATCCATCTCGACACCCAGGC
CGACCTCGAAGCCGCGATCACCAATCTGGTGAAGCAGGACAAGCGGCTGCGGCCGGTGCTGAAAACCGCGGGAATGCCGG
CGCTGCGGCGGCGCGATCCCGGCTTCCGCGGGCTCGCGGCGATCGTCTGCGGCCAGCAATTGTCGGTGGCGAGCGCGGCG
GCGATCTGGGCCCGGGTCGACGCCGCGTTCGATCCGTTCGACCACGCCGCGATCCAGCGCGCGCGCAGCGACCGGCTCGG
CCGGCTCGGCCTGTCGGCGGCGAAGATCAAGACGCTCAAGGCGCTGGCCAAGGAGTTGCATGCCGAGCGGCTCAATCTTG
ACGTGCTCGCCAATGAGGATGCCGACATCGCCCACACCACGCTGACCGCGCTGCACGGCATCGGGCCGTGGACCGCCGAC
ATCTATCTGCTGTTCTGTCTGGGCCATGGCGACGCCTGGCCGGCCGGCGATCTCGCCGTGCAGGAGGCGATGCGGATCGG
CCTCGGCCTCGAGGCAAGGCCGAGCGTCAAGCAGATGGCGCCGCTCGCCGAACCCTGGCGCCCGCTGCGCGGCGCCGCGG
CGCATCTGTGGTGGGCCTACTACCACGCGGTGAAGAAGCGCGACGGCGTGATCGCGGGGAAGGCGAAGACGGCGACGGCG
TAG

Upstream 100 bases:

>100_bases
GGGGCGAATCGGAAAACGGGTGGCGGCATCGAAACCCCGGCGTCATTGCCGGACTTGATCCGGCCATCCATCGCGTGGAA
GACTCGTCTTACGAGTACGG

Downstream 100 bases:

>100_bases
TTCCGTCCCTGCATGCGCGAGAAGCGACATGCAGGAACGCGGGCGCGAGGTGGCCGGATAGCGCTTCGCTGATCCGGACT
ACTAGAGCAGTTTTGTCTCT

Product: HhH-GPD

Products: NA

Alternate protein names: HhH-GPD; DNA-3-Methyladenine Glycosylase II; DNA-3-Methyladenine Glycosidase II; DNA-3-Methyladenine Glycosylase; DNA-3-Methyladenine Glycosidase II Protein; Base Excision DNA Repair Protein HhH-GPD Family; DNA-3-Methyladenine Glycosidase; DNA Glycosylase; DNA Repair Protein; Hhh-Gpd Family Protein; DNA-Glycosylase Family Protein; HhH-GPD Protein

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MDARVKPAHDGASELKSTMTIHLDTQADLEAAITNLVKQDKRLRPVLKTAGMPALRRRDPGFRGLAAIVCGQQLSVASAA
AIWARVDAAFDPFDHAAIQRARSDRLGRLGLSAAKIKTLKALAKELHAERLNLDVLANEDADIAHTTLTALHGIGPWTAD
IYLLFCLGHGDAWPAGDLAVQEAMRIGLGLEARPSVKQMAPLAEPWRPLRGAAAHLWWAYYHAVKKRDGVIAGKAKTATA

Sequences:

>Translated_240_residues
MDARVKPAHDGASELKSTMTIHLDTQADLEAAITNLVKQDKRLRPVLKTAGMPALRRRDPGFRGLAAIVCGQQLSVASAA
AIWARVDAAFDPFDHAAIQRARSDRLGRLGLSAAKIKTLKALAKELHAERLNLDVLANEDADIAHTTLTALHGIGPWTAD
IYLLFCLGHGDAWPAGDLAVQEAMRIGLGLEARPSVKQMAPLAEPWRPLRGAAAHLWWAYYHAVKKRDGVIAGKAKTATA
>Mature_240_residues
MDARVKPAHDGASELKSTMTIHLDTQADLEAAITNLVKQDKRLRPVLKTAGMPALRRRDPGFRGLAAIVCGQQLSVASAA
AIWARVDAAFDPFDHAAIQRARSDRLGRLGLSAAKIKTLKALAKELHAERLNLDVLANEDADIAHTTLTALHGIGPWTAD
IYLLFCLGHGDAWPAGDLAVQEAMRIGLGLEARPSVKQMAPLAEPWRPLRGAAAHLWWAYYHAVKKRDGVIAGKAKTATA

Specific function: Unknown

COG id: COG0122

COG function: function code L; 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.2.21

Molecular weight: Translated: 25892; Mature: 25892

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDARVKPAHDGASELKSTMTIHLDTQADLEAAITNLVKQDKRLRPVLKTAGMPALRRRDP
CCCCCCCCCCCHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
GFRGLAAIVCGQQLSVASAAAIWARVDAAFDPFDHAAIQRARSDRLGRLGLSAAKIKTLK
CHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ALAKELHAERLNLDVLANEDADIAHTTLTALHGIGPWTADIYLLFCLGHGDAWPAGDLAV
HHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHEEEEEECCCCCCCCHHHHH
QEAMRIGLGLEARPSVKQMAPLAEPWRPLRGAAAHLWWAYYHAVKKRDGVIAGKAKTATA
HHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC
>Mature Secondary Structure
MDARVKPAHDGASELKSTMTIHLDTQADLEAAITNLVKQDKRLRPVLKTAGMPALRRRDP
CCCCCCCCCCCHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
GFRGLAAIVCGQQLSVASAAAIWARVDAAFDPFDHAAIQRARSDRLGRLGLSAAKIKTLK
CHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ALAKELHAERLNLDVLANEDADIAHTTLTALHGIGPWTADIYLLFCLGHGDAWPAGDLAV
HHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHEEEEEECCCCCCCCHHHHH
QEAMRIGLGLEARPSVKQMAPLAEPWRPLRGAAAHLWWAYYHAVKKRDGVIAGKAKTATA
HHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA