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The map label for this gene is yfkH [H]

Identifier: 86747942

GI number: 86747942

Start: 932965

End: 933858

Strand: Reverse

Name: yfkH [H]

Synonym: RPB_0816

Alternate gene names: 86747942

Gene position: 933858-932965 (Counterclockwise)

Preceding gene: 86747948

Following gene: 86747939

Centisome position: 17.52

GC content: 65.55

Gene sequence:

>894_bases
TTGCAGCAGATCCGCTATGTCTATGCGGTCGCGATGGACGCATTCTACACGTTTCTGGCCGATGACGGGTGGGCGATCGC
GAGCCATATCGCGCTGTCCTCGCTGATGGCGCTGTTTCCGTTCCTGATCGTGCTGACCTCGGTGGCCGGCTTCTTCGGCT
CCAAGGACCTCGCGGATCAGGCCGCCGAGCTGATGCTGCAGATCTGGCCGGCCCAGGTCGCCAGCACGCTGTCGGGCGAA
ATCCACGACGTGCTGACCACCACCCGCGGCGACGCGCTGACGATCGGCCTGCTGCTGGCGCTGTATTTCGCCTCCAACGG
CGTCGAGAGCCTGCGGGTGGCGCTGAACCGCGCCTATGCGGTGATCGAGATGCGGCCGTGGTACATGCTGCGGCTGGAAT
CGATCGGCTACACGCTGGTGGCGGCCTTCACCGCGCTGGCGATGGCGTTCCTGATCGTGCTCGGCCCGCTGATTCTGGCG
ACCGCCCGGCACTACGTGCCGCTGATGGTCGAGGACAACCAGACGCTGCTGACGGTCGCGCGCTACGGCATCACCGTCGG
CGCGCTGATCCTCGCTTTGTTCATCCTGCACGCGCGGCTGCCGGCCGGGCACCGGACGGTGAAGCAGATCGTGCCCGGCA
TCGCCTTCACGGTCGTGGCGTCGCTGGCCTCAGGGGTCGGCTTCGGCTTGTATCTAGCGCGGTTCGCCAACAACTACGTG
ACGATGTATGCGGGTCTCGCCTCGGTGATCATCGCCCTGGTGTTTCTGTATTTCATCGCGGCGATCTTCGTCTATGGCGG
CGAACTCAACGCCGCCATCATCAAGTCGCGGCTGCCGGACGGCGTGACGCTGCAAGCAGCGCAGTTGCGAGCGCGCGGGG
AGACACCGGCTTGA

Upstream 100 bases:

>100_bases
GGGAAACGCCGATGGCGCGGCAACGAAGTCGGTTTGAGCAGGTTGGTAGCGATGCTAATGTTTGCGCCTCCGCCCGTCCC
AACCGCCAGTCAGGTGACCC

Downstream 100 bases:

>100_bases
GCAGAAAGGCGTCGGCGCCCGCCATCCGCGCCGCGGCCTCGTCCTGATCGCGGCCGGAGACGCCGATGATCGGCACCGCG
CCGAGCGGCGCCGCGAGGGC

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MQQIRYVYAVAMDAFYTFLADDGWAIASHIALSSLMALFPFLIVLTSVAGFFGSKDLADQAAELMLQIWPAQVASTLSGE
IHDVLTTTRGDALTIGLLLALYFASNGVESLRVALNRAYAVIEMRPWYMLRLESIGYTLVAAFTALAMAFLIVLGPLILA
TARHYVPLMVEDNQTLLTVARYGITVGALILALFILHARLPAGHRTVKQIVPGIAFTVVASLASGVGFGLYLARFANNYV
TMYAGLASVIIALVFLYFIAAIFVYGGELNAAIIKSRLPDGVTLQAAQLRARGETPA

Sequences:

>Translated_297_residues
MQQIRYVYAVAMDAFYTFLADDGWAIASHIALSSLMALFPFLIVLTSVAGFFGSKDLADQAAELMLQIWPAQVASTLSGE
IHDVLTTTRGDALTIGLLLALYFASNGVESLRVALNRAYAVIEMRPWYMLRLESIGYTLVAAFTALAMAFLIVLGPLILA
TARHYVPLMVEDNQTLLTVARYGITVGALILALFILHARLPAGHRTVKQIVPGIAFTVVASLASGVGFGLYLARFANNYV
TMYAGLASVIIALVFLYFIAAIFVYGGELNAAIIKSRLPDGVTLQAAQLRARGETPA
>Mature_297_residues
MQQIRYVYAVAMDAFYTFLADDGWAIASHIALSSLMALFPFLIVLTSVAGFFGSKDLADQAAELMLQIWPAQVASTLSGE
IHDVLTTTRGDALTIGLLLALYFASNGVESLRVALNRAYAVIEMRPWYMLRLESIGYTLVAAFTALAMAFLIVLGPLILA
TARHYVPLMVEDNQTLLTVARYGITVGALILALFILHARLPAGHRTVKQIVPGIAFTVVASLASGVGFGLYLARFANNYV
TMYAGLASVIIALVFLYFIAAIFVYGGELNAAIIKSRLPDGVTLQAAQLRARGETPA

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 32030; Mature: 32030

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQIRYVYAVAMDAFYTFLADDGWAIASHIALSSLMALFPFLIVLTSVAGFFGSKDLADQ
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AAELMLQIWPAQVASTLSGEIHDVLTTTRGDALTIGLLLALYFASNGVESLRVALNRAYA
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VIEMRPWYMLRLESIGYTLVAAFTALAMAFLIVLGPLILATARHYVPLMVEDNQTLLTVA
EEEECCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHH
RYGITVGALILALFILHARLPAGHRTVKQIVPGIAFTVVASLASGVGFGLYLARFANNYV
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHCCHH
TMYAGLASVIIALVFLYFIAAIFVYGGELNAAIIKSRLPDGVTLQAAQLRARGETPA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEHHHHHHCCCCCCC
>Mature Secondary Structure
MQQIRYVYAVAMDAFYTFLADDGWAIASHIALSSLMALFPFLIVLTSVAGFFGSKDLADQ
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AAELMLQIWPAQVASTLSGEIHDVLTTTRGDALTIGLLLALYFASNGVESLRVALNRAYA
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VIEMRPWYMLRLESIGYTLVAAFTALAMAFLIVLGPLILATARHYVPLMVEDNQTLLTVA
EEEECCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHH
RYGITVGALILALFILHARLPAGHRTVKQIVPGIAFTVVASLASGVGFGLYLARFANNYV
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHCCHH
TMYAGLASVIIALVFLYFIAAIFVYGGELNAAIIKSRLPDGVTLQAAQLRARGETPA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]