Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is aprE [H]
Identifier: 86747927
GI number: 86747927
Start: 898198
End: 899520
Strand: Reverse
Name: aprE [H]
Synonym: RPB_0801
Alternate gene names: 86747927
Gene position: 899520-898198 (Counterclockwise)
Preceding gene: 86747928
Following gene: 86747926
Centisome position: 16.87
GC content: 68.18
Gene sequence:
>1323_bases ATGACCCAACCCGCCGTGACAGAAGACCGCCGCAGCGCGCCGTTCCGCGATGTCCGAAACGCCGTGATCATCGGCGTGGC AGCGCTCGCGATCGTGATCTCGACGGCTGGCGTCTGGGCCGTGACGGCGCCGATCGCCAGCGCGGTGATCGCGCCGGCGC AGGTGGTGGTCGACAGCAATGTCCGCCGCATCCAGCACCCGACCGGCGGCGTGGTCGCCGGCATCTCCGTCAACGACGGC GACTACGTTCACGCCGGCGACGAACTGCTCCGGCTCGACGAAACCCTGCCGCGCGCCAATCTGGCGCTGATCGAGAATCA GCTCAACCAGTTCTGGACAAGGCGGGCCCGGCTGCAGGCCGAGCAGAACGGGCGCGACGCCATGCCGGTGCCGGTCGAAC TGACCGGCCGCACCGACGAGCCGGCGATCGCGCAGATCATCGAGGGCGAGACCGCGCTGCTGCTGCGGCGGCGCGAAGCG ATCACCGGCCAGCAATCGCAATTGGGCGAACGCAAATCCCAGATCGGCGAGGAAATCCGCGGACTGGCCGCGCAGATCGA TTCGAAGCGCGAACAGATCCGTCTGATCCAGCGCGAGCTCGAAGGCGTCCGGCAGTTGTTCGACAAGAACCTGATCCCCT ATGCCCGCCTGACCGCGCTGGAGCGCGAAGCCGCCCGCCTCACCGGCGAGGAAGGCCAGCTGATCGCCGACACCGCACGG GCGAAGGGGCGTATCACCGAGACCGAGCTGCAGATCATCCAGCTCACGCAGGATCAGCGCCGCGAGGTCGCGACCGACCT GCGCGAGGTCGAGATCAAGATCGCCGATCTGGCGGAACGCCGGATCGCCGCGCAGGACCAGCTCACGCGCGTCGTCCTCC GCGCGCCGCAGGACGGCCTGATCCATCAGAAGGCGGTGCACACCGTCGGCGGCGTCATCTCGCCCGGCGAACAATTGATG CTGATCGTGCCCAAGGATTCGTTGGTGATCGAGGCGCGGGTCGAGCCGCAGATGATCGACCGGCTGAAGCCCGGCCAGCC GGCCAAGCTGCGCTTCACCGCGTTCGACACCGCGGTCACGCCCGAACTCGACGGCACGCTGACCCGCATCGCCGCCGACC TCACCAAGGATCAGCAATCGGGCGCCGCCTATTATGTGGTCCGGATCAATCTCGCCGAGCGCGAGCTGGCGCGGCTCGAA GGCAAGGTCCTGGTGCCCGGCATGCCGGTCGAGGCCTACATCCAGAACGGCGTGCGGACCGCGTTGGCCTATCTGAGGAA ACCGCTCGAGGATCAGCTCGCCCGCGCCTTCCGCCAGCGCTGA
Upstream 100 bases:
>100_bases AAATCCCTGGCCGGCCAATACAACGCGCCCGGCACTGTCGCCTTGCAGGCGGTGCCGGAATCGCGCCCGCCGACCGCCGC CGTCAGCTGAGGGGCACGAC
Downstream 100 bases:
>100_bases GCGCGCGACGGGCGCGCCCGGGAGCGTTGGAGCGGGCGAAGGGAATCGAACCCTCGTATGCAGCTTGGGAAGCTGCCGTT CTACCATTGAACTACGCCCG
Product: Type I secretion membrane fusion protein, HlyD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MTQPAVTEDRRSAPFRDVRNAVIIGVAALAIVISTAGVWAVTAPIASAVIAPAQVVVDSNVRRIQHPTGGVVAGISVNDG DYVHAGDELLRLDETLPRANLALIENQLNQFWTRRARLQAEQNGRDAMPVPVELTGRTDEPAIAQIIEGETALLLRRREA ITGQQSQLGERKSQIGEEIRGLAAQIDSKREQIRLIQRELEGVRQLFDKNLIPYARLTALEREAARLTGEEGQLIADTAR AKGRITETELQIIQLTQDQRREVATDLREVEIKIADLAERRIAAQDQLTRVVLRAPQDGLIHQKAVHTVGGVISPGEQLM LIVPKDSLVIEARVEPQMIDRLKPGQPAKLRFTAFDTAVTPELDGTLTRIAADLTKDQQSGAAYYVVRINLAERELARLE GKVLVPGMPVEAYIQNGVRTALAYLRKPLEDQLARAFRQR
Sequences:
>Translated_440_residues MTQPAVTEDRRSAPFRDVRNAVIIGVAALAIVISTAGVWAVTAPIASAVIAPAQVVVDSNVRRIQHPTGGVVAGISVNDG DYVHAGDELLRLDETLPRANLALIENQLNQFWTRRARLQAEQNGRDAMPVPVELTGRTDEPAIAQIIEGETALLLRRREA ITGQQSQLGERKSQIGEEIRGLAAQIDSKREQIRLIQRELEGVRQLFDKNLIPYARLTALEREAARLTGEEGQLIADTAR AKGRITETELQIIQLTQDQRREVATDLREVEIKIADLAERRIAAQDQLTRVVLRAPQDGLIHQKAVHTVGGVISPGEQLM LIVPKDSLVIEARVEPQMIDRLKPGQPAKLRFTAFDTAVTPELDGTLTRIAADLTKDQQSGAAYYVVRINLAERELARLE GKVLVPGMPVEAYIQNGVRTALAYLRKPLEDQLARAFRQR >Mature_439_residues TQPAVTEDRRSAPFRDVRNAVIIGVAALAIVISTAGVWAVTAPIASAVIAPAQVVVDSNVRRIQHPTGGVVAGISVNDGD YVHAGDELLRLDETLPRANLALIENQLNQFWTRRARLQAEQNGRDAMPVPVELTGRTDEPAIAQIIEGETALLLRRREAI TGQQSQLGERKSQIGEEIRGLAAQIDSKREQIRLIQRELEGVRQLFDKNLIPYARLTALEREAARLTGEEGQLIADTARA KGRITETELQIIQLTQDQRREVATDLREVEIKIADLAERRIAAQDQLTRVVLRAPQDGLIHQKAVHTVGGVISPGEQLML IVPKDSLVIEARVEPQMIDRLKPGQPAKLRFTAFDTAVTPELDGTLTRIAADLTKDQQSGAAYYVVRINLAERELARLEG KVLVPGMPVEAYIQNGVRTALAYLRKPLEDQLARAFRQR
Specific function: Involved in the secretion of alkaline protease [H]
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR010129 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 48589; Mature: 48458
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPAVTEDRRSAPFRDVRNAVIIGVAALAIVISTAGVWAVTAPIASAVIAPAQVVVDSN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHEEECCC VRRIQHPTGGVVAGISVNDGDYVHAGDELLRLDETLPRANLALIENQLNQFWTRRARLQA CHHHCCCCCCEEEEEEECCCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH EQNGRDAMPVPVELTGRTDEPAIAQIIEGETALLLRRREAITGQQSQLGERKSQIGEEIR HCCCCCCCCCCEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH GLAAQIDSKREQIRLIQRELEGVRQLFDKNLIPYARLTALEREAARLTGEEGQLIADTAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHH AKGRITETELQIIQLTQDQRREVATDLREVEIKIADLAERRIAAQDQLTRVVLRAPQDGL CCCCCCHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IHQKAVHTVGGVISPGEQLMLIVPKDSLVIEARVEPQMIDRLKPGQPAKLRFTAFDTAVT HHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHCCCCCCCEEEEEEECCCCC PELDGTLTRIAADLTKDQQSGAAYYVVRINLAERELARLEGKVLVPGMPVEAYIQNGVRT CCCCHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHCCCEECCCCCHHHHHHHHHHH ALAYLRKPLEDQLARAFRQR HHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure TQPAVTEDRRSAPFRDVRNAVIIGVAALAIVISTAGVWAVTAPIASAVIAPAQVVVDSN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHEEECCC VRRIQHPTGGVVAGISVNDGDYVHAGDELLRLDETLPRANLALIENQLNQFWTRRARLQA CHHHCCCCCCEEEEEEECCCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH EQNGRDAMPVPVELTGRTDEPAIAQIIEGETALLLRRREAITGQQSQLGERKSQIGEEIR HCCCCCCCCCCEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH GLAAQIDSKREQIRLIQRELEGVRQLFDKNLIPYARLTALEREAARLTGEEGQLIADTAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHH AKGRITETELQIIQLTQDQRREVATDLREVEIKIADLAERRIAAQDQLTRVVLRAPQDGL CCCCCCHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IHQKAVHTVGGVISPGEQLMLIVPKDSLVIEARVEPQMIDRLKPGQPAKLRFTAFDTAVT HHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHCCCCCCCEEEEEEECCCCC PELDGTLTRIAADLTKDQQSGAAYYVVRINLAERELARLEGKVLVPGMPVEAYIQNGVRT CCCCHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHCCCEECCCCCHHHHHHHHHHH ALAYLRKPLEDQLARAFRQR HHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1427098; 10984043 [H]