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The map label for this gene is yfiA [C]

Identifier: 86747780

GI number: 86747780

Start: 738368

End: 738976

Strand: Reverse

Name: yfiA [C]

Synonym: RPB_0654

Alternate gene names: 86747780

Gene position: 738976-738368 (Counterclockwise)

Preceding gene: 86747781

Following gene: 86747779

Centisome position: 13.86

GC content: 65.02

Gene sequence:

>609_bases
ATGACTTTTCGGGTCTCCGGCAAAAGCATCAGCGTCGGCGAAGCCCTGCGCGGCCGCGTCAGCGAGCGCACCGAAGAAGT
GCTGCGCAAGTATTTCGACGGCAATTATTCGGGCCACATCACGCTGAGCAAGGACGGCTTCGGCTTCCGCACCGACTGCT
CGCTGCATCTCGATTCCGGCATCACGCTGGAAGCCGAATCGAACGCCGCCGATGCCTATGCGAGCGCCGATCAGGCGCTG
CTGCAGATCGAGAAGCGACTGCGTCGCTACAAGAGCCGGCTGAAGGATCGATCCGCGCGCAAGGCGCATGCGGAGGCCAG
CGCGCTGGCCGAACTGACCGCGCCGGTGGACATGCCGAGCTACATCATCGAAGCGCCCGGCGACGAGGAACATCACGAGG
ACGCCTACAACCCGGTGATCATCGCCGAGGCCACCACCGCGATGAAGCGGTTCTCGGTGAGCGAAGCCGTGGTCGAACTC
GACCTCACCGGCGCCCCGGTGCTGGTGTTCCTTCATGGCAGTTCGGGACGGGTCAACATCATCTACCGGCGCGCCGACGG
CAACATCGGCTGGATCGATCCGCCGGCGCTGAACGGCGCCGCGGCCTGA

Upstream 100 bases:

>100_bases
CTGGCGGCGCCCGCCGATCGGTCCCGCGACACCGCTCCGGCTTGATTACGCCGCTGCTCGGACTACTGTCATTACCCCCA
AGGACGAAACGAGGCATCCC

Downstream 100 bases:

>100_bases
CGGAGCGGCGGCGGAGCCGGCCGGAGGTTGCGGCGAGATCGGGCATTGACGCCCGCCGACGCCTCTGCCTATGGTCCGCC
GCCTTCCGACGCCGGTCCGG

Product: sigma 54 modulation protein/ribosomal protein S30EA

Products: NA

Alternate protein names: ORF203 [H]

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MTFRVSGKSISVGEALRGRVSERTEEVLRKYFDGNYSGHITLSKDGFGFRTDCSLHLDSGITLEAESNAADAYASADQAL
LQIEKRLRRYKSRLKDRSARKAHAEASALAELTAPVDMPSYIIEAPGDEEHHEDAYNPVIIAEATTAMKRFSVSEAVVEL
DLTGAPVLVFLHGSSGRVNIIYRRADGNIGWIDPPALNGAAA

Sequences:

>Translated_202_residues
MTFRVSGKSISVGEALRGRVSERTEEVLRKYFDGNYSGHITLSKDGFGFRTDCSLHLDSGITLEAESNAADAYASADQAL
LQIEKRLRRYKSRLKDRSARKAHAEASALAELTAPVDMPSYIIEAPGDEEHHEDAYNPVIIAEATTAMKRFSVSEAVVEL
DLTGAPVLVFLHGSSGRVNIIYRRADGNIGWIDPPALNGAAA
>Mature_201_residues
TFRVSGKSISVGEALRGRVSERTEEVLRKYFDGNYSGHITLSKDGFGFRTDCSLHLDSGITLEAESNAADAYASADQALL
QIEKRLRRYKSRLKDRSARKAHAEASALAELTAPVDMPSYIIEAPGDEEHHEDAYNPVIIAEATTAMKRFSVSEAVVELD
LTGAPVLVFLHGSSGRVNIIYRRADGNIGWIDPPALNGAAA

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

None

Paralogues:

None

Copy number: 600 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 21980; Mature: 21849

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFRVSGKSISVGEALRGRVSERTEEVLRKYFDGNYSGHITLSKDGFGFRTDCSLHLDSG
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEECCC
ITLEAESNAADAYASADQALLQIEKRLRRYKSRLKDRSARKAHAEASALAELTAPVDMPS
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YIIEAPGDEEHHEDAYNPVIIAEATTAMKRFSVSEAVVELDLTGAPVLVFLHGSSGRVNI
EEEECCCCCCCCHHCCCCEEEEEHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCEEEE
IYRRADGNIGWIDPPALNGAAA
EEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TFRVSGKSISVGEALRGRVSERTEEVLRKYFDGNYSGHITLSKDGFGFRTDCSLHLDSG
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEECCC
ITLEAESNAADAYASADQALLQIEKRLRRYKSRLKDRSARKAHAEASALAELTAPVDMPS
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YIIEAPGDEEHHEDAYNPVIIAEATTAMKRFSVSEAVVELDLTGAPVLVFLHGSSGRVNI
EEEECCCCCCCCHHCCCCEEEEEHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCEEEE
IYRRADGNIGWIDPPALNGAAA
EEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1991712; 12597275 [H]