| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747778
Identifier: 86747778
GI number: 86747778
Start: 737216
End: 737482
Strand: Direct
Name: 86747778
Synonym: RPB_0652
Alternate gene names: NA
Gene position: 737216-737482 (Clockwise)
Preceding gene: 86747777
Following gene: 86747786
Centisome position: 13.83
GC content: 62.55
Gene sequence:
>267_bases ATGACTGGAATGGGCACAAATCACGACAATGCCAGCGTCACGCCGGAAGCGCTGGCGCATCTGGGCGAAGGTCATATCGC CTATGTGAAGCAGATTCGTTCGGAGGATGTCCCCGGGCTGTTCCCGCAGGCGCCGCATATCGCGCCGGGCATCAAGCTGT TTGCGCTGCATTCGGCCGACGGCACGCCGATCATGCTGACCGACAGCCGCGAATCGGCGGTTGCCAATGCCTGGAGCCAG GAGCTGCAGGCCGTCAGCGTTCACTGA
Upstream 100 bases:
>100_bases CGGAGCCGGAGCGGGTCATTAAGACAATCGCCATCACGGAACATGAATAATGGAACGAGTAGCGGACTCGACCGCTTAGT CTGACAGAGGAGTCGAGACC
Downstream 100 bases:
>100_bases ACGCTGACGTTCGCATTGCGCGACGCGGGCGCCCGGCGACGGGTCCCGCGTAGGCGGCCCGCATCGATACTGCCCCGCGT GCGCTCGAGCCGGCGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MTGMGTNHDNASVTPEALAHLGEGHIAYVKQIRSEDVPGLFPQAPHIAPGIKLFALHSADGTPIMLTDSRESAVANAWSQ ELQAVSVH
Sequences:
>Translated_88_residues MTGMGTNHDNASVTPEALAHLGEGHIAYVKQIRSEDVPGLFPQAPHIAPGIKLFALHSADGTPIMLTDSRESAVANAWSQ ELQAVSVH >Mature_87_residues TGMGTNHDNASVTPEALAHLGEGHIAYVKQIRSEDVPGLFPQAPHIAPGIKLFALHSADGTPIMLTDSRESAVANAWSQE LQAVSVH
Specific function: Unknown
COG id: COG5568
COG function: function code S; Uncharacterized small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9311; Mature: 9179
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGMGTNHDNASVTPEALAHLGEGHIAYVKQIRSEDVPGLFPQAPHIAPGIKLFALHSAD CCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCC GTPIMLTDSRESAVANAWSQELQAVSVH CCEEEEECCCHHHHHHHHHHHHEEECCC >Mature Secondary Structure TGMGTNHDNASVTPEALAHLGEGHIAYVKQIRSEDVPGLFPQAPHIAPGIKLFALHSAD CCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCC GTPIMLTDSRESAVANAWSQELQAVSVH CCEEEEECCCHHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA