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The map label for this gene is ybjT [C]

Identifier: 86747786

GI number: 86747786

Start: 744542

End: 745507

Strand: Direct

Name: ybjT [C]

Synonym: RPB_0660

Alternate gene names: 86747786

Gene position: 744542-745507 (Clockwise)

Preceding gene: 86747778

Following gene: 86747788

Centisome position: 13.96

GC content: 68.22

Gene sequence:

>966_bases
ATGACTTCGAATATCGACACCCTCGTCACGGTTTTCGGCGGTTCGGGCTTCATCGGCCGCCATGTGGTCAGCGCGCTGGC
CCGTCGGGACTACCGAATCAGGGTGGCGGTGCGGCGGCCGGAGCTCGCCGGGCATCTGCAGCCGCTCGGGCGGGTCGGCC
AGATCCATGCGGTGCAGGCCAATCTGCGCTACCCGGCCTCGATCGAGGCGGCGATGCGCGGCGCCCATGTGGCGATCAAT
CTGGTCGGCATTCTGGCTGAGGGTGGTGCGCAGAAATTCGATGCAGTTCAGGCCGAGGGCGCAGCTTCGATCGCCAAGGC
CGCCGCGGCCGTCGGCGCGCGGATGGTGCATGTCTCGGCGATCGGCGCAGATGCGGCTTCGCCGGCGCGCTACGCCCGCT
CCAAGGCGGCCGGAGAGCAGGCGGTGCTGGCCGCGGTGCCGACCGCCACCATTCTGCGGCCATCGGTGGTGTTCGGCCCC
GAGGATCAGTTCACCAATCGCTTCGCGTCGCTGGCGCGGATGTTGCCGGTGGTGCCGCTGGTCGGCGCAGAGACCAAGCT
GCAGCCGGTCTATGTCGGCGATGTCGCGACCGCGGTCGCCGAGGCCGTCGACGGCAACACCAGGCCGGGCGCCACCTACG
AGCTGGGCGGCCCGGAGCAACTGACGATGCGCGAGATCATCGAGATCATCCTCGAAACGATCGATCGCCAGCGGCTGTTG
CTGCCGCTGCCGTTCGGGCTCGCCAGTCTGCAGGCGATGCTGCTGCAATTCGCGCCGGGCGATCTCAAGCTGACGCCGGA
TCAGGTCGAGCTGCTGAAGGTCGACAACATCGTGTCGGAGGCCGCCAAGAGCGCCGGGCTGACGCTGCAGGGCCTCGGTA
TCACGCCGGATTCGATGCAGGCGATCGTGCCGTCCTATCTCTGGCGCTTCCGCAAGACCGGCCAGTTCGCGCGCAAGAAC
GCGTGA

Upstream 100 bases:

>100_bases
CGGCTCCAATTCCGCTGTACAGCGAAAGGTTGATGCCGTAACGCGAAACCGCCAGAATGCAGGCGTTCCGGCGCTTCGTT
TCTCCACAGGATGACCCCGC

Downstream 100 bases:

>100_bases
CGAGGCGCGCGTGACGACCCGCGCGTGACGATCGCGGCTTTGCGCCGCGATCAGCGGCCCATCGCCAGCGCGATCAGGCC
GAGCGTGCCGACGACGACGC

Product: dehydrogenase

Products: NAD+; ubiquinol

Alternate protein names: NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase; NADH-Ubiquinone Oxidoreductase Subunit; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; NADH-Ubiquinone Oxireductase; NADH Dehydrogenase/Oxidoreductase-Like Protein; NADH-Ubiquinone Oxidoreductase Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH Ubiquinone Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerases; Dtdp-Glucose-46-Dehydratase; NADH Dehydrogenase 1 Alpha Subcomplex; Dehydrogenase; NADH-Dependent Oxidoreductase; NADH Dehydrogenase/NADH Dehydrogenase Protein; Ubiquinone Dependent NADH Dehydrogenase; NADH Dehydrogenase Subunit; Homolog NADH Dehydrogenase; NADH Dehydrogenase-Like Protein; NAD Dependent Epimerase; Nucleoside-Diphosphate Sugar Epimerase; NADH-Ubiquinone Oxidoreductase -Like Protein; NADH-Ubiquinone Oxidoreductase Putativ; NADH-Quinone Oxidoreductase

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MTSNIDTLVTVFGGSGFIGRHVVSALARRDYRIRVAVRRPELAGHLQPLGRVGQIHAVQANLRYPASIEAAMRGAHVAIN
LVGILAEGGAQKFDAVQAEGAASIAKAAAAVGARMVHVSAIGADAASPARYARSKAAGEQAVLAAVPTATILRPSVVFGP
EDQFTNRFASLARMLPVVPLVGAETKLQPVYVGDVATAVAEAVDGNTRPGATYELGGPEQLTMREIIEIILETIDRQRLL
LPLPFGLASLQAMLLQFAPGDLKLTPDQVELLKVDNIVSEAAKSAGLTLQGLGITPDSMQAIVPSYLWRFRKTGQFARKN
A

Sequences:

>Translated_321_residues
MTSNIDTLVTVFGGSGFIGRHVVSALARRDYRIRVAVRRPELAGHLQPLGRVGQIHAVQANLRYPASIEAAMRGAHVAIN
LVGILAEGGAQKFDAVQAEGAASIAKAAAAVGARMVHVSAIGADAASPARYARSKAAGEQAVLAAVPTATILRPSVVFGP
EDQFTNRFASLARMLPVVPLVGAETKLQPVYVGDVATAVAEAVDGNTRPGATYELGGPEQLTMREIIEIILETIDRQRLL
LPLPFGLASLQAMLLQFAPGDLKLTPDQVELLKVDNIVSEAAKSAGLTLQGLGITPDSMQAIVPSYLWRFRKTGQFARKN
A
>Mature_320_residues
TSNIDTLVTVFGGSGFIGRHVVSALARRDYRIRVAVRRPELAGHLQPLGRVGQIHAVQANLRYPASIEAAMRGAHVAINL
VGILAEGGAQKFDAVQAEGAASIAKAAAAVGARMVHVSAIGADAASPARYARSKAAGEQAVLAAVPTATILRPSVVFGPE
DQFTNRFASLARMLPVVPLVGAETKLQPVYVGDVATAVAEAVDGNTRPGATYELGGPEQLTMREIIEIILETIDRQRLLL
PLPFGLASLQAMLLQFAPGDLKLTPDQVELLKVDNIVSEAAKSAGLTLQGLGITPDSMQAIVPSYLWRFRKTGQFARKNA

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=297, Percent_Identity=32.996632996633, Blast_Score=145, Evalue=6e-35,
Organism=Escherichia coli, GI87081793, Length=239, Percent_Identity=21.7573221757322, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17556106, Length=263, Percent_Identity=31.9391634980989, Blast_Score=123, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24667554, Length=323, Percent_Identity=30.9597523219814, Blast_Score=121, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 33883; Mature: 33751

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSNIDTLVTVFGGSGFIGRHVVSALARRDYRIRVAVRRPELAGHLQPLGRVGQIHAVQA
CCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHCCCEEEEEEE
NLRYPASIEAAMRGAHVAINLVGILAEGGAQKFDAVQAEGAASIAKAAAAVGARMVHVSA
CCCCCCHHHHHHCCCCEEEEEEEEHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHEEEEEE
IGADAASPARYARSKAAGEQAVLAAVPTATILRPSVVFGPEDQFTNRFASLARMLPVVPL
CCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHCCCEEECCCHHHHHHHHHHHHHHHHCCC
VGAETKLQPVYVGDVATAVAEAVDGNTRPGATYELGGPEQLTMREIIEIILETIDRQRLL
CCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEE
LPLPFGLASLQAMLLQFAPGDLKLTPDQVELLKVDNIVSEAAKSAGLTLQGLGITPDSMQ
EECCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHH
AIVPSYLWRFRKTGQFARKNA
HHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
TSNIDTLVTVFGGSGFIGRHVVSALARRDYRIRVAVRRPELAGHLQPLGRVGQIHAVQA
CCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHCCCEEEEEEE
NLRYPASIEAAMRGAHVAINLVGILAEGGAQKFDAVQAEGAASIAKAAAAVGARMVHVSA
CCCCCCHHHHHHCCCCEEEEEEEEHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHEEEEEE
IGADAASPARYARSKAAGEQAVLAAVPTATILRPSVVFGPEDQFTNRFASLARMLPVVPL
CCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHCCCEEECCCHHHHHHHHHHHHHHHHCCC
VGAETKLQPVYVGDVATAVAEAVDGNTRPGATYELGGPEQLTMREIIEIILETIDRQRLL
CCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEE
LPLPFGLASLQAMLLQFAPGDLKLTPDQVELLKVDNIVSEAAKSAGLTLQGLGITPDSMQ
EECCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHH
AIVPSYLWRFRKTGQFARKNA
HHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA