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The map label for this gene is 86747768

Identifier: 86747768

GI number: 86747768

Start: 727298

End: 727972

Strand: Direct

Name: 86747768

Synonym: RPB_0642

Alternate gene names: NA

Gene position: 727298-727972 (Clockwise)

Preceding gene: 86747756

Following gene: 86747770

Centisome position: 13.64

GC content: 69.19

Gene sequence:

>675_bases
ATGGCCACTCCTGCTTTCGTCAAACGCATCCTGAGGAGCGACGCTTTCCAGTGGGCGGCGGTGATTCCGGCCGCGGCCTA
TTTGCAGCTCGTGATGTGGACCGGCCGGTTCGACCGTGCGCCGTTTCCGATTGCCGAGCCGTACATCCTGGCGATGTGGC
ACGGCCGGCTGAACATGCTGCCGATGCTGCGCAATGGCGGCAAGCCGATGATCGCGCTGATCAGCGGTCATCGCGACGGC
CAGATCATCAGCAAGGCCGGCGCCGTGTACGGGATCCAGACCGCGGTCGGATCGAGTTCCAAGGGCGGCATGCGGGCGGC
GCGCGAGATGCTGCGGCTGGCGCGTGACGGCCACAGCCTGTTCGTGACGCCCGACGGCCCGCGCGGTCCGCGCATGCACA
TCAACAATGACGGCATCCTGGACCTCGCCCGGCTCACCGGGCTGCCGATCCTGCCGGTCGCCGTCAGCATGCAGCGCGGC
AAGCTGCTGCGGAGCTGGGACCGGCTGCTGCTGCCGGGCCTGTTCTCGAAGATCGCGATCCGGTTCGGCGAACCGATCGT
CGTCGATGCCGATGCCGATCGCGCCGAGCTCCGTGCCCGGCTGTCGGCGTCCCTCACCGCCGCGCAGCAGGAGACCGACC
GGCTGGTCGGCCGCGTGCCGGTCGAGCCGGCGTAG

Upstream 100 bases:

>100_bases
AGCGGCGCGGTTTGCAGCTTGCTGCCGGCCGATATAAACCCGCGAGCCGCGGAAATCAGCCCAGCTTGCCGCGACCAGAT
TTGCCCGGACAATCCTCGGT

Downstream 100 bases:

>100_bases
AGGCTGTGGGTCAGCCGAATTCGGCGCCGAGCCTTTGCATCATCGGGACGAAATCCGGGAAGCTGGTGGCGATGAAGGCG
GTGTCGTCGACCCTGACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MATPAFVKRILRSDAFQWAAVIPAAAYLQLVMWTGRFDRAPFPIAEPYILAMWHGRLNMLPMLRNGGKPMIALISGHRDG
QIISKAGAVYGIQTAVGSSSKGGMRAAREMLRLARDGHSLFVTPDGPRGPRMHINNDGILDLARLTGLPILPVAVSMQRG
KLLRSWDRLLLPGLFSKIAIRFGEPIVVDADADRAELRARLSASLTAAQQETDRLVGRVPVEPA

Sequences:

>Translated_224_residues
MATPAFVKRILRSDAFQWAAVIPAAAYLQLVMWTGRFDRAPFPIAEPYILAMWHGRLNMLPMLRNGGKPMIALISGHRDG
QIISKAGAVYGIQTAVGSSSKGGMRAAREMLRLARDGHSLFVTPDGPRGPRMHINNDGILDLARLTGLPILPVAVSMQRG
KLLRSWDRLLLPGLFSKIAIRFGEPIVVDADADRAELRARLSASLTAAQQETDRLVGRVPVEPA
>Mature_223_residues
ATPAFVKRILRSDAFQWAAVIPAAAYLQLVMWTGRFDRAPFPIAEPYILAMWHGRLNMLPMLRNGGKPMIALISGHRDGQ
IISKAGAVYGIQTAVGSSSKGGMRAAREMLRLARDGHSLFVTPDGPRGPRMHINNDGILDLARLTGLPILPVAVSMQRGK
LLRSWDRLLLPGLFSKIAIRFGEPIVVDADADRAELRARLSASLTAAQQETDRLVGRVPVEPA

Specific function: Unknown

COG id: COG2121

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.pylori HP0270 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007172
- ProDom:   PD032436 [H]

Pfam domain/function: PF04028 DUF374 [H]

EC number: NA

Molecular weight: Translated: 24451; Mature: 24320

Theoretical pI: Translated: 11.50; Mature: 11.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPAFVKRILRSDAFQWAAVIPAAAYLQLVMWTGRFDRAPFPIAEPYILAMWHGRLNML
CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCC
PMLRNGGKPMIALISGHRDGQIISKAGAVYGIQTAVGSSSKGGMRAAREMLRLARDGHSL
HHHHCCCCCEEEEEECCCCCCHHHHCCCEEEEHHHCCCCCCCHHHHHHHHHHHHCCCCEE
FVTPDGPRGPRMHINNDGILDLARLTGLPILPVAVSMQRGKLLRSWDRLLLPGLFSKIAI
EEECCCCCCCEEEECCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFGEPIVVDADADRAELRARLSASLTAAQQETDRLVGRVPVEPA
HCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ATPAFVKRILRSDAFQWAAVIPAAAYLQLVMWTGRFDRAPFPIAEPYILAMWHGRLNML
CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCC
PMLRNGGKPMIALISGHRDGQIISKAGAVYGIQTAVGSSSKGGMRAAREMLRLARDGHSL
HHHHCCCCCEEEEEECCCCCCHHHHCCCEEEEHHHCCCCCCCHHHHHHHHHHHHCCCCEE
FVTPDGPRGPRMHINNDGILDLARLTGLPILPVAVSMQRGKLLRSWDRLLLPGLFSKIAI
EEECCCCCCCEEEECCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFGEPIVVDADADRAELRARLSASLTAAQQETDRLVGRVPVEPA
HCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]