Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is yeaZ [C]
Identifier: 86747712
GI number: 86747712
Start: 659647
End: 660339
Strand: Direct
Name: yeaZ [C]
Synonym: RPB_0586
Alternate gene names: 86747712
Gene position: 659647-660339 (Clockwise)
Preceding gene: 86747711
Following gene: 86747713
Centisome position: 12.37
GC content: 73.88
Gene sequence:
>693_bases ATGTTGATCCTCGCCATCGATACCGCGCTCGACGCCTGCGCCGCAGCGGTGCTGGACACCGGCGCGAACCGGCTGCTCGC CGGGGAATCGCAGTCGATGCAGCGCGGCCATGCCGAGGCGCTGATGCCGCTGCTCGGCCGCGTGATGCAATCCTCCGGCA TCGGCTTCGCCGATCTCGACCGCATCGCAGTGACGACCGGACCTGGTAGTTTCACCGGGTTGCGGGTCGGGCTGTCCGCC GCGCGCGGCATCGCGCTCGCCGCCGACAAGCCGATCGTCGGCCTCACCACGCTGTCCGCCTTCGCCGCGCCGCTGGTCAG CGAGCGCGACGACACCCCGATCCTGTCGGCGATCGATGCGCGGCACGATCAGGTCTATTATCAGCTCGTCAGCGGCAACG GCACGCGTCTGGTGTCGCCGCGGGTCGGCCCGATCGGCGAGGCGCTGGAGACGGCGCGCCACGGCGCGCCGCGGCTGGTC GGCAATGCGGCGGGCCTGCTCGCCGCGCGCTGGCCGGCGCTCACCCCGCCGGCGCCGTTGATCGATCCGCAGCCCGCGCC CGACATCTTCTGGGTCGCCTGGCTCGGCGCCGCCGCCACGCCCGAGGCCGCGCCGGCGCGGCCGTTCTATCTGCGCGCGC CGGACGCGAGGCCTCAGGCCGATGCGCTGGCGCGGGCGCAGCCCGCTGCATGA
Upstream 100 bases:
>100_bases GACATGCTGCGTCGCGCCATGCGTGGCTTGTCAGCGAATCTCTGTCGATCGTGTCCGTCGGGGCATGACGCGCCCGCTGC ATTGCTGATATGCTTGCCGG
Downstream 100 bases:
>100_bases CGCGGCCCGCATGAGGACATGGCTGGCCGAATTCTGGGGTTACGCCGACGCGGTGGTCGAGCCTGCGACGCTGCGCGACA GTCCGAAACTGGCGCAGCTG
Product: peptidase M22, glycoprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MLILAIDTALDACAAAVLDTGANRLLAGESQSMQRGHAEALMPLLGRVMQSSGIGFADLDRIAVTTGPGSFTGLRVGLSA ARGIALAADKPIVGLTTLSAFAAPLVSERDDTPILSAIDARHDQVYYQLVSGNGTRLVSPRVGPIGEALETARHGAPRLV GNAAGLLAARWPALTPPAPLIDPQPAPDIFWVAWLGAAATPEAAPARPFYLRAPDARPQADALARAQPAA
Sequences:
>Translated_230_residues MLILAIDTALDACAAAVLDTGANRLLAGESQSMQRGHAEALMPLLGRVMQSSGIGFADLDRIAVTTGPGSFTGLRVGLSA ARGIALAADKPIVGLTTLSAFAAPLVSERDDTPILSAIDARHDQVYYQLVSGNGTRLVSPRVGPIGEALETARHGAPRLV GNAAGLLAARWPALTPPAPLIDPQPAPDIFWVAWLGAAATPEAAPARPFYLRAPDARPQADALARAQPAA >Mature_230_residues MLILAIDTALDACAAAVLDTGANRLLAGESQSMQRGHAEALMPLLGRVMQSSGIGFADLDRIAVTTGPGSFTGLRVGLSA ARGIALAADKPIVGLTTLSAFAAPLVSERDDTPILSAIDARHDQVYYQLVSGNGTRLVSPRVGPIGEALETARHGAPRLV GNAAGLLAARWPALTPPAPLIDPQPAPDIFWVAWLGAAATPEAAPARPFYLRAPDARPQADALARAQPAA
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=127, Percent_Identity=37.007874015748, Blast_Score=94, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 23673; Mature: 23673
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLILAIDTALDACAAAVLDTGANRLLAGESQSMQRGHAEALMPLLGRVMQSSGIGFADLD CEEEEEHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RIAVTTGPGSFTGLRVGLSAARGIALAADKPIVGLTTLSAFAAPLVSERDDTPILSAIDA EEEEEECCCCCHHHHHHHHHHCCEEEECCCCEEHHHHHHHHHHHHHCCCCCCCHHHHHHC RHDQVYYQLVSGNGTRLVSPRVGPIGEALETARHGAPRLVGNAAGLLAARWPALTPPAPL CCCEEEEEEECCCCCEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCC IDPQPAPDIFWVAWLGAAATPEAAPARPFYLRAPDARPQADALARAQPAA CCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCC >Mature Secondary Structure MLILAIDTALDACAAAVLDTGANRLLAGESQSMQRGHAEALMPLLGRVMQSSGIGFADLD CEEEEEHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RIAVTTGPGSFTGLRVGLSAARGIALAADKPIVGLTTLSAFAAPLVSERDDTPILSAIDA EEEEEECCCCCHHHHHHHHHHCCEEEECCCCEEHHHHHHHHHHHHHCCCCCCCHHHHHHC RHDQVYYQLVSGNGTRLVSPRVGPIGEALETARHGAPRLVGNAAGLLAARWPALTPPAPL CCCEEEEEEECCCCCEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCC IDPQPAPDIFWVAWLGAAATPEAAPARPFYLRAPDARPQADALARAQPAA CCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]