Definition | Rhodopseudomonas palustris HaA2, complete genome. |
---|---|
Accession | NC_007778 |
Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is rimI [H]
Identifier: 86747713
GI number: 86747713
Start: 660350
End: 660835
Strand: Direct
Name: rimI [H]
Synonym: RPB_0587
Alternate gene names: 86747713
Gene position: 660350-660835 (Clockwise)
Preceding gene: 86747712
Following gene: 86747714
Centisome position: 12.39
GC content: 62.76
Gene sequence:
>486_bases ATGAGGACATGGCTGGCCGAATTCTGGGGTTACGCCGACGCGGTGGTCGAGCCTGCGACGCTGCGCGACAGTCCGAAACT GGCGCAGCTGCACGCCGCGTCGTTCCATTCGGGCTGGAGCGAAGAGGAATTCGCCGACCTTTTGAGCCAGCGCAACACAC TGGTGCACCGATTGCGTATGGGACGTCGGATCATCGGGTTCATCGCCTCGCGATTCGGGGCCGACGAAGCCGAAATCCTG TCGATCGCCGTGGCTTCCGGTTACCGGGGGCGCGGGTTGTCACGGGAACTGCTGCTGACGCATCTCGGTCATCTCGCCGG CCACGGTGTCGCCAAAGTGTTTCTGGAGGTCGAAGAGAACAACCAGCCGGCGCGGCGTTTGTACCAGCGCGCCGGTTTCG AGATCGTCGGTCGGCGCGAGCGTTACTACCGGCAGCCCGACGGCCAACAATTGAACGCATTGATAATGCGTCGCGACTTG TCCTAG
Upstream 100 bases:
>100_bases GAGGCCGCGCCGGCGCGGCCGTTCTATCTGCGCGCGCCGGACGCGAGGCCTCAGGCCGATGCGCTGGCGCGGGCGCAGCC CGCTGCATGACGCGGCCCGC
Downstream 100 bases:
>100_bases TTTTCGCGCGATGGCACAAGTGCTCGTCGCTCCATCCCATTCAAACGATGCGTTGACGCCGATGTCCGATATGAAGGCCA CTGATATGAAGGCCACCGAA
Product: ribosomal-protein-alanine acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MRTWLAEFWGYADAVVEPATLRDSPKLAQLHAASFHSGWSEEEFADLLSQRNTLVHRLRMGRRIIGFIASRFGADEAEIL SIAVASGYRGRGLSRELLLTHLGHLAGHGVAKVFLEVEENNQPARRLYQRAGFEIVGRRERYYRQPDGQQLNALIMRRDL S
Sequences:
>Translated_161_residues MRTWLAEFWGYADAVVEPATLRDSPKLAQLHAASFHSGWSEEEFADLLSQRNTLVHRLRMGRRIIGFIASRFGADEAEIL SIAVASGYRGRGLSRELLLTHLGHLAGHGVAKVFLEVEENNQPARRLYQRAGFEIVGRRERYYRQPDGQQLNALIMRRDL S >Mature_161_residues MRTWLAEFWGYADAVVEPATLRDSPKLAQLHAASFHSGWSEEEFADLLSQRNTLVHRLRMGRRIIGFIASRFGADEAEIL SIAVASGYRGRGLSRELLLTHLGHLAGHGVAKVFLEVEENNQPARRLYQRAGFEIVGRRERYYRQPDGQQLNALIMRRDL S
Specific function: This enzyme acetylates the N-terminal alanine of a ribosomal protein S18 [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI2367381, Length=123, Percent_Identity=34.9593495934959, Blast_Score=63, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 18332; Mature: 18332
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTWLAEFWGYADAVVEPATLRDSPKLAQLHAASFHSGWSEEEFADLLSQRNTLVHRLRM CCCHHHHHHCHHHHHCCCHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GRRIIGFIASRFGADEAEILSIAVASGYRGRGLSRELLLTHLGHLAGHGVAKVFLEVEEN HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHEEEECCC NQPARRLYQRAGFEIVGRRERYYRQPDGQQLNALIMRRDLS CCHHHHHHHHCCCCEECCHHHHCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MRTWLAEFWGYADAVVEPATLRDSPKLAQLHAASFHSGWSEEEFADLLSQRNTLVHRLRM CCCHHHHHHCHHHHHCCCHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GRRIIGFIASRFGADEAEILSIAVASGYRGRGLSRELLLTHLGHLAGHGVAKVFLEVEEN HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHEEEECCC NQPARRLYQRAGFEIVGRRERYYRQPDGQQLNALIMRRDLS CCHHHHHHHHCCCCEECCHHHHCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA