Click here to switch to the map view.

The map label for this gene is yhgI [C]

Identifier: 86747711

GI number: 86747711

Start: 658930

End: 659496

Strand: Direct

Name: yhgI [C]

Synonym: RPB_0585

Alternate gene names: 86747711

Gene position: 658930-659496 (Clockwise)

Preceding gene: 86747710

Following gene: 86747712

Centisome position: 12.36

GC content: 66.67

Gene sequence:

>567_bases
ATGTTCATTCAGACCGAACCCACGCCGAATCCCGCCACCCTGAAATTCATCCCCGGCCGCGTCGTGCTCGACAGCGGCAC
GATGGAATTCACCGACCGCAGCCAGGCGGCGCGCTCGCCGCTGGCGGAGCGGCTGTTCGACGTCGATGGCGTCAGCGGCG
TGTTCTACGGCTCGGATTTCGTCACCGTCACCAAGGACGGCGGCGACTGGCAGCACCTCAAGCCGGCGATTCTCGGCGCG
ATCATGGAGCACTACATGTCCGGCGCGCCGATCCTGGCCGACGGCAAGACGGATGGCGACGCCGGCGACGAGGACGACGA
GTTCTTCGCCGAGCGCGACGCCGAGACCGTCGAGATCATCAAGGACCTGATCGAGACGCGGGTGCGCCCGGCGGTCGCCA
ATGACGGCGGCGACATCACCTTCCGCGGCTTCAAGGACGGCATCGTCTATCTCGCCATGAAGGGCGCCTGCTCCGGCTGC
CCGTCCTCGACCGCGACGCTGCAGCACGGCATCCAGAACCTGCTGAAGCACTTCGTGCCGGAAGTGGTCGAAGTCCGCCC
GGTCTGA

Upstream 100 bases:

>100_bases
CTTCCATTGCGGTCTGCCGGCTTGATCGTGCGTTCCGCGACGCCATCTGCTAGACACACCCTCACGCACCGGCCTTGAAC
CGGCGACGACGGAGATCCCC

Downstream 100 bases:

>100_bases
GCGGCGCGCCCGCGCGCCATCCCGTATCCGAACGCCGTCCGGCGCGACGCGACATGCTGCGTCGCGCCATGCGTGGCTTG
TCAGCGAATCTCTGTCGATC

Product: nitrogen-fixing NifU-like

Products: NA

Alternate protein names: NifU Domain Protein; NifU Domain-Containing Protein; Nitrogen-Fixing NifU Domain Protein; Nitrogen-Fixing NifU-Like; Nitrogen Fixation Protein; NifU-Like Protein; NifU Related Protein; NifU-Like Domain-Containing Protein; NifU Protein; Nitrogen-Fixing NifU-Like Protein; Scaffold Protein Nfu/Nifu; NifU-Like Domain Protein; NifU Family Protein; Thioredoxin-Like Protein; Nitrogen-Fixing NifU; NifU Iron-Sulphur Cluster Scaffold Protein; Nif System Fes Cluster Assembly Nifu Family Protein; Thioredoxin-Related Protein; Thioredoxin-Like Domain Protein; Scaffold Protein Nfu/NifU N Terminal Domain Protein; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing NifU Domain-Containing Protein; Nitrogen Fixing Thioredoxin-Like Protein NifU; Nitrogen-Fixing Protein; NFU1 Iron-Sulfur Cluster Scaffold-Like Protein; Fe-S Cluster Assembly Protein NFU; Nifu Protein; NifU Domain Containing Protein; HIRA-Interacting; Nitrogen-Fixing NifU C-Terminal; Scaffold Protein Nfu/NifU-Like Protein; Scaffold Protein Nfu/NifU N Terminal; NitrogeN-Fixing Nifu Domain Protein; Thioredoxin

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MFIQTEPTPNPATLKFIPGRVVLDSGTMEFTDRSQAARSPLAERLFDVDGVSGVFYGSDFVTVTKDGGDWQHLKPAILGA
IMEHYMSGAPILADGKTDGDAGDEDDEFFAERDAETVEIIKDLIETRVRPAVANDGGDITFRGFKDGIVYLAMKGACSGC
PSSTATLQHGIQNLLKHFVPEVVEVRPV

Sequences:

>Translated_188_residues
MFIQTEPTPNPATLKFIPGRVVLDSGTMEFTDRSQAARSPLAERLFDVDGVSGVFYGSDFVTVTKDGGDWQHLKPAILGA
IMEHYMSGAPILADGKTDGDAGDEDDEFFAERDAETVEIIKDLIETRVRPAVANDGGDITFRGFKDGIVYLAMKGACSGC
PSSTATLQHGIQNLLKHFVPEVVEVRPV
>Mature_188_residues
MFIQTEPTPNPATLKFIPGRVVLDSGTMEFTDRSQAARSPLAERLFDVDGVSGVFYGSDFVTVTKDGGDWQHLKPAILGA
IMEHYMSGAPILADGKTDGDAGDEDDEFFAERDAETVEIIKDLIETRVRPAVANDGGDITFRGFKDGIVYLAMKGACSGC
PSSTATLQHGIQNLLKHFVPEVVEVRPV

Specific function: Unknown

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI50593025, Length=184, Percent_Identity=50, Blast_Score=198, Evalue=2e-51,
Organism=Homo sapiens, GI50593021, Length=184, Percent_Identity=50, Blast_Score=198, Evalue=2e-51,
Organism=Homo sapiens, GI50593023, Length=107, Percent_Identity=44.8598130841121, Blast_Score=107, Evalue=8e-24,
Organism=Homo sapiens, GI50593019, Length=107, Percent_Identity=44.8598130841121, Blast_Score=107, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI17541876, Length=189, Percent_Identity=48.6772486772487, Blast_Score=185, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6322811, Length=203, Percent_Identity=36.4532019704434, Blast_Score=125, Evalue=6e-30,
Organism=Drosophila melanogaster, GI45551492, Length=190, Percent_Identity=48.4210526315789, Blast_Score=187, Evalue=3e-48,
Organism=Drosophila melanogaster, GI24643765, Length=190, Percent_Identity=48.4210526315789, Blast_Score=187, Evalue=3e-48,
Organism=Drosophila melanogaster, GI45556188, Length=190, Percent_Identity=48.4210526315789, Blast_Score=187, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20335; Mature: 20335

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIQTEPTPNPATLKFIPGRVVLDSGTMEFTDRSQAARSPLAERLFDVDGVSGVFYGSDF
CCCCCCCCCCCCEEEEECCEEEEECCCCCCCCHHHHHHCHHHHHHHCCCCCCEEEECCCE
VTVTKDGGDWQHLKPAILGAIMEHYMSGAPILADGKTDGDAGDEDDEFFAERDAETVEII
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHCCCHHHHHH
KDLIETRVRPAVANDGGDITFRGFKDGIVYLAMKGACSGCPSSTATLQHGIQNLLKHFVP
HHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
EVVEVRPV
HHHHCCCC
>Mature Secondary Structure
MFIQTEPTPNPATLKFIPGRVVLDSGTMEFTDRSQAARSPLAERLFDVDGVSGVFYGSDF
CCCCCCCCCCCCEEEEECCEEEEECCCCCCCCHHHHHHCHHHHHHHCCCCCCEEEECCCE
VTVTKDGGDWQHLKPAILGAIMEHYMSGAPILADGKTDGDAGDEDDEFFAERDAETVEII
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHCCCHHHHHH
KDLIETRVRPAVANDGGDITFRGFKDGIVYLAMKGACSGCPSSTATLQHGIQNLLKHFVP
HHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
EVVEVRPV
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA