Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86747710
Identifier: 86747710
GI number: 86747710
Start: 658288
End: 658782
Strand: Direct
Name: 86747710
Synonym: RPB_0584
Alternate gene names: NA
Gene position: 658288-658782 (Clockwise)
Preceding gene: 86747709
Following gene: 86747711
Centisome position: 12.35
GC content: 69.49
Gene sequence:
>495_bases ATGAGCAGCCAGCGACGCAGCTACGAATCCGGCCACAAGCCGAAATGCCTCGTCGTGGTCGACGATACCGCCGAGTGGGA TCGCGCGGTGTATTACGCCAGCCGCTGGGCGGTGCGGGTCGGCGGCGGCGTGGTGATGCTGCGAGTGATCGAGATTCCCG ACCAGAACCAGCAATGGCTCGGCGTCGCCGATGTGATGCGCGCCGAGGCGATCGACATCGCCGAACAGGCGCTCGACCGC GCCTCCGGCCGCGCCAATGGCGTCGCCGGCATCACCCCGGAGCGGGTGATCCGCGAGGGCGACACCATCGCCCAGATCCG CAAGGCGATCGAGGCCGACGTCGACATCACCACGCTGGTGCTGGCGGCGAGCGACGGCCCGGACGGCCCGGGCCCGATCG TCACCGCGATGGTGCGCCATCTCGGCTCGTTCCCGGTTCCCGTCGTGGTGGTGGCGTCGAGCCTGACCGACGACGACATC GACGCGCTGACCTGA
Upstream 100 bases:
>100_bases ATGACGGCGTCGGGAAAGCGTCACCCGCTTGTCCGCCACCGCGCTGCCGTGGCAGCATGGCGGGGTTTGGGCGGGCGCGC GCCTGGGATCGGGGACAACC
Downstream 100 bases:
>100_bases TCGCGGTCACCCGATCGAAAAGTTGAATGCTTTCAAGCCACAATCGCCTTCCATTGCGGTCTGCCGGCTTGATCGTGCGT TCCGCGACGCCATCTGCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: Universal Stress Family Protein; UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family; UspA Protein
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSSQRRSYESGHKPKCLVVVDDTAEWDRAVYYASRWAVRVGGGVVMLRVIEIPDQNQQWLGVADVMRAEAIDIAEQALDR ASGRANGVAGITPERVIREGDTIAQIRKAIEADVDITTLVLAASDGPDGPGPIVTAMVRHLGSFPVPVVVVASSLTDDDI DALT
Sequences:
>Translated_164_residues MSSQRRSYESGHKPKCLVVVDDTAEWDRAVYYASRWAVRVGGGVVMLRVIEIPDQNQQWLGVADVMRAEAIDIAEQALDR ASGRANGVAGITPERVIREGDTIAQIRKAIEADVDITTLVLAASDGPDGPGPIVTAMVRHLGSFPVPVVVVASSLTDDDI DALT >Mature_163_residues SSQRRSYESGHKPKCLVVVDDTAEWDRAVYYASRWAVRVGGGVVMLRVIEIPDQNQQWLGVADVMRAEAIDIAEQALDRA SGRANGVAGITPERVIREGDTIAQIRKAIEADVDITTLVLAASDGPDGPGPIVTAMVRHLGSFPVPVVVVASSLTDDDID ALT
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17579; Mature: 17448
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQRRSYESGHKPKCLVVVDDTAEWDRAVYYASRWAVRVGGGVVMLRVIEIPDQNQQWL CCCCCCCHHCCCCCEEEEEECCCCCHHHHHHHHHHEEEEECCCEEEEEEEECCCCCCCEE GVADVMRAEAIDIAEQALDRASGRANGVAGITPERVIREGDTIAQIRKAIEADVDITTLV CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCEEEEE LAASDGPDGPGPIVTAMVRHLGSFPVPVVVVASSLTDDDIDALT EEECCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHCCC >Mature Secondary Structure SSQRRSYESGHKPKCLVVVDDTAEWDRAVYYASRWAVRVGGGVVMLRVIEIPDQNQQWL CCCCCCHHCCCCCEEEEEECCCCCHHHHHHHHHHEEEEECCCEEEEEEEECCCCCCCEE GVADVMRAEAIDIAEQALDRASGRANGVAGITPERVIREGDTIAQIRKAIEADVDITTLV CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCEEEEE LAASDGPDGPGPIVTAMVRHLGSFPVPVVVVASSLTDDDIDALT EEECCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA