Click here to switch to the map view.

The map label for this gene is ydjH [C]

Identifier: 86747707

GI number: 86747707

Start: 654151

End: 655152

Strand: Reverse

Name: ydjH [C]

Synonym: RPB_0581

Alternate gene names: 86747707

Gene position: 655152-654151 (Counterclockwise)

Preceding gene: 86747735

Following gene: 86747704

Centisome position: 12.29

GC content: 68.76

Gene sequence:

>1002_bases
ATGAGCTCAGCCCAATACGACGTCCTCGCCATCGGCAACGCGCTGTTCGACGTGCTGGTGCGCACCGAGGACGACTTCCT
GCTTCGCCACGGCATGGCCAAAGGCGGCATGGCGCTGATCGACGAGGCCGGCGCGGCGGCGATCTACGCCGATATGGGGA
TGGCCACCGAGATCTCCGGCGGCTCCGCCGCCAACACCATCGTCGGGCTGGCGAGCTTCGGCGCGCGCACCGCCTATGTC
GGCAAGATCAAGGACGACCAGATCGGCAAGCTGTACGCCCACGACATCCGCGCCGCCGGCGTCGCATTCGACACCCGGCC
CGCGGCGGACGGACCGGCCACCGGCTGCTCCTACATTCTGGTGACGCCGGACGGCGAGCGCACCATGAACACGTTTCTCG
GCGCGGCGCAGGATCTGCGCCCCTCCGACATCGACGAGGCGCAGGTCGCGGCGGCGGCGATTACTTATCTCGAAGGCTAT
CTGTGGGATCCGCCGCAGGCCAAGGAGGCGTTCCTGAAAGCCTCGACCATCGCGCATGGCGCCGGCCGCCGTGTGGCGCT
GACGCTGTCCGATGCGTTCTGCGTCGATCGCTATCGCGGCGAGTTCCTCGACCTGATGCGGAGCAAGACCGTCGACCTGA
TCTTCGCCAACGAGTCGGAGCTGCATTCGCTGTACCAGACCTCGGATTTCGACACCGCGCTGAAGGCGCTGGCGCAGGAT
GTCGGGCTCGGCGTGGTCACCCGCAGCGAGAAGGGCTGCGCGGTGGTCGAGGGCGACAGCGTGACGCTGGTGCCGGCGGC
GCAAATCGACCAGCTCGTCGACACCACCGGCGCCGGCGACCTGTTCGCCGCGGGCTTCCTGTTCGGCCTGGTGCGCGACG
CCGGCTACGAGAACGCCGGCCGGCTCGGCGCGCTGGCTGCCGCCGAAGTGATCCAGCACATCGGCGCCCGGCCGCTGGTG
TCGCTGAAAGAGCTGGCGCAGCAGCACGGGCTGCCGGTGTAA

Upstream 100 bases:

>100_bases
CGTGATAGGCCGGCGCGCCTTTCGCGCGGCCGGCGATGCACCGGCCCCTGCCGCCCAACCGCGGTCCGATTTCCCCCTCG
CCGCAACGGAACCCCTCTCG

Downstream 100 bases:

>100_bases
GCCGCACGATGACCTCTCCCCGCGCGCGGGGAGAGGTCGGATCGGCGCGTAGCGCTGATCCGGGTGAGGGGGCGTTTCAA
CGCAGCCGAGACTCAGTGCT

Product: PfkB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MSSAQYDVLAIGNALFDVLVRTEDDFLLRHGMAKGGMALIDEAGAAAIYADMGMATEISGGSAANTIVGLASFGARTAYV
GKIKDDQIGKLYAHDIRAAGVAFDTRPAADGPATGCSYILVTPDGERTMNTFLGAAQDLRPSDIDEAQVAAAAITYLEGY
LWDPPQAKEAFLKASTIAHGAGRRVALTLSDAFCVDRYRGEFLDLMRSKTVDLIFANESELHSLYQTSDFDTALKALAQD
VGLGVVTRSEKGCAVVEGDSVTLVPAAQIDQLVDTTGAGDLFAAGFLFGLVRDAGYENAGRLGALAAAEVIQHIGARPLV
SLKELAQQHGLPV

Sequences:

>Translated_333_residues
MSSAQYDVLAIGNALFDVLVRTEDDFLLRHGMAKGGMALIDEAGAAAIYADMGMATEISGGSAANTIVGLASFGARTAYV
GKIKDDQIGKLYAHDIRAAGVAFDTRPAADGPATGCSYILVTPDGERTMNTFLGAAQDLRPSDIDEAQVAAAAITYLEGY
LWDPPQAKEAFLKASTIAHGAGRRVALTLSDAFCVDRYRGEFLDLMRSKTVDLIFANESELHSLYQTSDFDTALKALAQD
VGLGVVTRSEKGCAVVEGDSVTLVPAAQIDQLVDTTGAGDLFAAGFLFGLVRDAGYENAGRLGALAAAEVIQHIGARPLV
SLKELAQQHGLPV
>Mature_332_residues
SSAQYDVLAIGNALFDVLVRTEDDFLLRHGMAKGGMALIDEAGAAAIYADMGMATEISGGSAANTIVGLASFGARTAYVG
KIKDDQIGKLYAHDIRAAGVAFDTRPAADGPATGCSYILVTPDGERTMNTFLGAAQDLRPSDIDEAQVAAAAITYLEGYL
WDPPQAKEAFLKASTIAHGAGRRVALTLSDAFCVDRYRGEFLDLMRSKTVDLIFANESELHSLYQTSDFDTALKALAQDV
GLGVVTRSEKGCAVVEGDSVTLVPAAQIDQLVDTTGAGDLFAAGFLFGLVRDAGYENAGRLGALAAAEVIQHIGARPLVS
LKELAQQHGLPV

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87081971, Length=278, Percent_Identity=27.6978417266187, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17541820, Length=334, Percent_Identity=26.3473053892216, Blast_Score=82, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6322565, Length=330, Percent_Identity=26.3636363636364, Blast_Score=77, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21355521, Length=339, Percent_Identity=26.2536873156342, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24663633, Length=336, Percent_Identity=23.8095238095238, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21356339, Length=336, Percent_Identity=23.8095238095238, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 34937; Mature: 34806

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAQYDVLAIGNALFDVLVRTEDDFLLRHGMAKGGMALIDEAGAAAIYADMGMATEISG
CCCCCCHHEEHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEECCCCEEEEECCCCEEECCC
GSAANTIVGLASFGARTAYVGKIKDDQIGKLYAHDIRAAGVAFDTRPAADGPATGCSYIL
CCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCEEECCCCCCCCCCCCCEEEE
VTPDGERTMNTFLGAAQDLRPSDIDEAQVAAAAITYLEGYLWDPPQAKEAFLKASTIAHG
ECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
AGRRVALTLSDAFCVDRYRGEFLDLMRSKTVDLIFANESELHSLYQTSDFDTALKALAQD
CCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHH
VGLGVVTRSEKGCAVVEGDSVTLVPAAQIDQLVDTTGAGDLFAAGFLFGLVRDAGYENAG
HCCEEEEECCCCCEEEECCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
RLGALAAAEVIQHIGARPLVSLKELAQQHGLPV
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSAQYDVLAIGNALFDVLVRTEDDFLLRHGMAKGGMALIDEAGAAAIYADMGMATEISG
CCCCCHHEEHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEECCCCEEEEECCCCEEECCC
GSAANTIVGLASFGARTAYVGKIKDDQIGKLYAHDIRAAGVAFDTRPAADGPATGCSYIL
CCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCEEECCCCCCCCCCCCCEEEE
VTPDGERTMNTFLGAAQDLRPSDIDEAQVAAAAITYLEGYLWDPPQAKEAFLKASTIAHG
ECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
AGRRVALTLSDAFCVDRYRGEFLDLMRSKTVDLIFANESELHSLYQTSDFDTALKALAQD
CCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHH
VGLGVVTRSEKGCAVVEGDSVTLVPAAQIDQLVDTTGAGDLFAAGFLFGLVRDAGYENAG
HCCEEEEECCCCCEEEECCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
RLGALAAAEVIQHIGARPLVSLKELAQQHGLPV
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]