| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747691
Identifier: 86747691
GI number: 86747691
Start: 635826
End: 636812
Strand: Reverse
Name: 86747691
Synonym: RPB_0565
Alternate gene names: NA
Gene position: 636812-635826 (Counterclockwise)
Preceding gene: 86747693
Following gene: 86747690
Centisome position: 11.94
GC content: 69.71
Gene sequence:
>987_bases ATGCCACAGTTGCAGGATTTTCGACGCGGCCGGCCGGGCTTCTATCCCGATCAGGCGATCTATGCCGAATACGCCTGCAC CCGGCTCGGACTCGTCTTCCGCGAGCTCGACGGCGGCACCGGCCTGCTGTTCAGCGTCGCATCGGCGGCGAAAGAGATTT GCTTCGGCGGCGGGCGCTGCTCGTATTATCCGCAGAACGACGCCACCGCGTCGTCGCTGGCGACCGACAAATATCTCGCC AATGCGCTGCTGCAACGCGCCGGCGTGGCGACGCTCGGCGGGCGCGCTTTCTTCCTGCACGACCGGCACCGCGCGCTGCG GCCGCCCGGCCACGAACGCAGCGACGCGCAGGACTATCTCGCGGCGCTCGGCGGCCGCGCCTTCGCCAAGCCGCTGACCG GATCGCGGGGCGACTTCGCGCGGGTGGTCGACGGCGTCGCGGCATTCGCCGCGTATCTCGACGAGGTGGCGCGCTACTAC GACTCGGTGCTGATCCAGCCGGTCGCCACCGGCCACGAGTATCGCGTGTTCGTGATCGACGGCGAGGTGCTGTACAGCGC GCGCAAGCGACCGCCTTACGTGATCGGCGACGGCCTTCGCACGCTGCGCGATCTGCTGCGCGACCACGATCGCGCGCTGC GCGACATCGGCCTGTCGGACACCGCCACCATCGGCGCGGCGTTCGACAAGGTGCCGGCGGCCGGCGAGCTGCGCGCGATC GAGGGCCGGATGAATCTCAGCGCCGGCGGCGCGATGACGATGGCCGACGCCGGTGCCGCGGCGATCACGGCGGCCACAGC GGCGGTCCGCGCGCTCGGGCTGCGGCTCGGCGCGGTCGACCTGTTCGTCGACCCGGACCATCGCGACGACGTCCGGGTGA TCGAGGTGAATTCCAACCCGGCGATCCGCTTTCTCGAAACATGCGGCCGTGACGATCTGATCCTGTCGATCTGGCGGCAC AGCGTCACGGCGACGGGATTGTTGTAG
Upstream 100 bases:
>100_bases GCACGATAACGGCCACGGCGCGGCTGGATCACACCTCGGTGATCCGCTAGGTTGCGGCGCAGAGTCGTTCGGAGACCGCC GCGCGACGGGCGGGGCCGTC
Downstream 100 bases:
>100_bases ATGTTCGACCTGCCGAAATACGGCGACGGAATCTGCCTGGCGCGGCTCGCCGCGGTGCTCGATCGGCTCGGCATCGATCG CGCAAGGCTGTCGCGCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MPQLQDFRRGRPGFYPDQAIYAEYACTRLGLVFRELDGGTGLLFSVASAAKEICFGGGRCSYYPQNDATASSLATDKYLA NALLQRAGVATLGGRAFFLHDRHRALRPPGHERSDAQDYLAALGGRAFAKPLTGSRGDFARVVDGVAAFAAYLDEVARYY DSVLIQPVATGHEYRVFVIDGEVLYSARKRPPYVIGDGLRTLRDLLRDHDRALRDIGLSDTATIGAAFDKVPAAGELRAI EGRMNLSAGGAMTMADAGAAAITAATAAVRALGLRLGAVDLFVDPDHRDDVRVIEVNSNPAIRFLETCGRDDLILSIWRH SVTATGLL
Sequences:
>Translated_328_residues MPQLQDFRRGRPGFYPDQAIYAEYACTRLGLVFRELDGGTGLLFSVASAAKEICFGGGRCSYYPQNDATASSLATDKYLA NALLQRAGVATLGGRAFFLHDRHRALRPPGHERSDAQDYLAALGGRAFAKPLTGSRGDFARVVDGVAAFAAYLDEVARYY DSVLIQPVATGHEYRVFVIDGEVLYSARKRPPYVIGDGLRTLRDLLRDHDRALRDIGLSDTATIGAAFDKVPAAGELRAI EGRMNLSAGGAMTMADAGAAAITAATAAVRALGLRLGAVDLFVDPDHRDDVRVIEVNSNPAIRFLETCGRDDLILSIWRH SVTATGLL >Mature_327_residues PQLQDFRRGRPGFYPDQAIYAEYACTRLGLVFRELDGGTGLLFSVASAAKEICFGGGRCSYYPQNDATASSLATDKYLAN ALLQRAGVATLGGRAFFLHDRHRALRPPGHERSDAQDYLAALGGRAFAKPLTGSRGDFARVVDGVAAFAAYLDEVARYYD SVLIQPVATGHEYRVFVIDGEVLYSARKRPPYVIGDGLRTLRDLLRDHDRALRDIGLSDTATIGAAFDKVPAAGELRAIE GRMNLSAGGAMTMADAGAAAITAATAAVRALGLRLGAVDLFVDPDHRDDVRVIEVNSNPAIRFLETCGRDDLILSIWRHS VTATGLL
Specific function: Unknown
COG id: COG1181
COG function: function code M; D-alanine-D-alanine ligase and related ATP-grasp enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35351; Mature: 35220
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQLQDFRRGRPGFYPDQAIYAEYACTRLGLVFRELDGGTGLLFSVASAAKEICFGGGRC CCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEE SYYPQNDATASSLATDKYLANALLQRAGVATLGGRAFFLHDRHRALRPPGHERSDAQDYL CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCEEEEEECCHHHCCCCCCCCCCHHHHH AALGGRAFAKPLTGSRGDFARVVDGVAAFAAYLDEVARYYDSVLIQPVATGHEYRVFVID HHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE GEVLYSARKRPPYVIGDGLRTLRDLLRDHDRALRDIGLSDTATIGAAFDKVPAAGELRAI CHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEE EGRMNLSAGGAMTMADAGAAAITAATAAVRALGLRLGAVDLFVDPDHRDDVRVIEVNSNP CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEECCCC AIRFLETCGRDDLILSIWRHSVTATGLL CHHHHHHCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure PQLQDFRRGRPGFYPDQAIYAEYACTRLGLVFRELDGGTGLLFSVASAAKEICFGGGRC CCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEE SYYPQNDATASSLATDKYLANALLQRAGVATLGGRAFFLHDRHRALRPPGHERSDAQDYL CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCEEEEEECCHHHCCCCCCCCCCHHHHH AALGGRAFAKPLTGSRGDFARVVDGVAAFAAYLDEVARYYDSVLIQPVATGHEYRVFVID HHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE GEVLYSARKRPPYVIGDGLRTLRDLLRDHDRALRDIGLSDTATIGAAFDKVPAAGELRAI CHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEE EGRMNLSAGGAMTMADAGAAAITAATAAVRALGLRLGAVDLFVDPDHRDDVRVIEVNSNP CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEECCCC AIRFLETCGRDDLILSIWRHSVTATGLL CHHHHHHCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA