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The map label for this gene is omp31 [H]

Identifier: 86747693

GI number: 86747693

Start: 639289

End: 641274

Strand: Reverse

Name: omp31 [H]

Synonym: RPB_0567

Alternate gene names: 86747693

Gene position: 641274-639289 (Counterclockwise)

Preceding gene: 86747694

Following gene: 86747691

Centisome position: 12.03

GC content: 67.52

Gene sequence:

>1986_bases
ATGATCCATCCGCGACGCTGCGCCACCATGCGCCCAATCGTGACGACCGCGCTGATGCTCGGCGGCCTGGTGCTGCCGCA
GGCCGCGTCCGCGGCCGACGCACTGAAGGCATTGCCGAGCCCGGCCATGGACTGGAGCGGCTTCTATGTCGGCGCCCATG
CCGGCTATGTCCGCGGCCACGCCGATGCGCGCCTGCAGGATCCGACGTTCGCGGCGAGCCAGAGCAGCGGCTCCGGCGGC
GTCACCGCCGGCGCGCAGGCGGGCTACAATATTCTGACGCGCGCGGGCGTGCTGTTCGGCGTCGAGGCCGACATCTCGTT
TCCGAGCTATCTGCCGGCCAATGCGGTGCTGTCGGAGTTCGACAACGCAACCTCGACGGCGCAGCAGCATATCGATTTCT
ACGGCACGCTGCGGGCCAGGCTCGGCGTCGCGGCGGGGCGATGGCTCGGCTACGTCACCGGCGGCCTCGCCTATGAGCAC
GAGCGCTATCTGACCGAACCCGGCGCCGGCAAGGTGCTGAACGGCCGGATCGGCTGGGCCGCGGGCGCGGGCCTGGAATA
CGGCTTCACGCCGAACTGGAGCGCGCGGATCGAATATCTCTACAGCGACTTCGGCAACGCTTCGGTGGGGTTGCCGACCG
GCGCCCGCTACGACACCGCGATGAATCTGCAGACGGTCCGGATCGGCGTCAATCGCCGGATCGACTGGCTGGGCTCGGGC
GAGACGGCTCCGTTCGCGACCGTCGCCGATCCGGACTCCGACCGCTGGGAAATCCACGGCCAGACCACCGTGGTCGGCCA
GGGCTATCCCTCGTTCCGCGCGCCCTATAGCGGCGCCAACAGTCTGACGCCGAACGCGCAGTTCAAATCGACCTGGAGCT
CCGGCCTGTTCGCCAATGTCCGGCTGTGGGACGGCGGCGAATTGTATCTCGGCCCGGAATTCCTGCAGGGCTTCGGGCTG
AGCGACACCGTCGGCGTCGCCGGCTTTCCCAATGGCGAGGGGCAGAAATCCGGCTTCGCTTTTCCGCATATCAGCCCGTC
GCGATTCTATCTGCGCCAGACTTTCGGCCTCGGCGGCGAGCAGGAACAGCTCGCCTCCAGCGCATCGCAGCTCTCGGGCA
AGGCCGACATCTCGCGGCTGACGCTGCAGGTCGGGCGCTTCAGCGTGCTCGACGCGTTCGACGGCAACGCCTATGCGCAC
GACCCGCGCCGCGACTTCATGAACTGGTCGATCTGGGCGTCCGGCGCGTTCGACTACGCCGCCGACAAGCTCGGCCTCAC
CTACGGCGCCACCGCCGAACTGAACCAGAAGCAATGGGCGCTGCGCGCCGGCTACTTCCTGATGGACGCGGAATCCAACT
CCAACAATTTCGACATGCGGCTGGGCCAGCGCGGCCAATATGTCGCCGAACTGGAGACTCGCTATGCGCTGTTCGGCCAG
CCCGGCAAGCTGCGCACGCTGGCGTTCCTCAACAGCGTCTATGCCGGCAGCTATCGCGAGACGCTCGACAACCCGCTGCT
GAACCTCGACATCAGCCAGACGAGGCGCGGCCGGATCAAATACGGCTACGCGCTCAATCTCGAACAGGCGGTGAGCGACG
ACATCGGCGTGTTCGGACGCTGGAGCTGGAACGACGGCAAGAACGAGATCATGGCGTTCACCGACATCGACGACAGCCTG
TCCGGCGGCGTCTCGATCCGCGGCCTGCGCTGGGGCCGGCCGGACGACGTCATCGGCATCGCCGGCGCGACCAACGGGCT
GTCGCGCGACCACCGCGATTTCCTCGCCGCCGGCGGGCTCGGCCCGCTGATCGGCGACGGCGCGCTCAATTATCGCCGCG
AGAATTTGCTCGAGACCTACTACGCCTACGCGATCAACCGCGCCTGGACCGCGACCGCCGACTATCAGTTCATCGTCAAC
CCGGCCTACAACGCCGACCGCGGCCCGGTCTCGGTGTTCAGCGCCCGGCTGCACGGCGAGTTCTGA

Upstream 100 bases:

>100_bases
AGCCAAACCGTTCCTGGATTTCGTCAGCTTGCGATCCATCAGCGAAGCTGTCCGGCGACTCGCGCGGCCAAGACCGCGCG
ATATTCATGTGAAGTCTGCA

Downstream 100 bases:

>100_bases
GTGGCCCGAAGCCCATCCTTCGAGGCTCGCTACGCTCGCGCCTCAGGATGACGGCGTTGAGTGTCGCACGCTCAGGATCA
CCGCGGTGTTTGTGGCGCGC

Product: OmpA-like transmembrane domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 661; Mature: 661

Protein sequence:

>661_residues
MIHPRRCATMRPIVTTALMLGGLVLPQAASAADALKALPSPAMDWSGFYVGAHAGYVRGHADARLQDPTFAASQSSGSGG
VTAGAQAGYNILTRAGVLFGVEADISFPSYLPANAVLSEFDNATSTAQQHIDFYGTLRARLGVAAGRWLGYVTGGLAYEH
ERYLTEPGAGKVLNGRIGWAAGAGLEYGFTPNWSARIEYLYSDFGNASVGLPTGARYDTAMNLQTVRIGVNRRIDWLGSG
ETAPFATVADPDSDRWEIHGQTTVVGQGYPSFRAPYSGANSLTPNAQFKSTWSSGLFANVRLWDGGELYLGPEFLQGFGL
SDTVGVAGFPNGEGQKSGFAFPHISPSRFYLRQTFGLGGEQEQLASSASQLSGKADISRLTLQVGRFSVLDAFDGNAYAH
DPRRDFMNWSIWASGAFDYAADKLGLTYGATAELNQKQWALRAGYFLMDAESNSNNFDMRLGQRGQYVAELETRYALFGQ
PGKLRTLAFLNSVYAGSYRETLDNPLLNLDISQTRRGRIKYGYALNLEQAVSDDIGVFGRWSWNDGKNEIMAFTDIDDSL
SGGVSIRGLRWGRPDDVIGIAGATNGLSRDHRDFLAAGGLGPLIGDGALNYRRENLLETYYAYAINRAWTATADYQFIVN
PAYNADRGPVSVFSARLHGEF

Sequences:

>Translated_661_residues
MIHPRRCATMRPIVTTALMLGGLVLPQAASAADALKALPSPAMDWSGFYVGAHAGYVRGHADARLQDPTFAASQSSGSGG
VTAGAQAGYNILTRAGVLFGVEADISFPSYLPANAVLSEFDNATSTAQQHIDFYGTLRARLGVAAGRWLGYVTGGLAYEH
ERYLTEPGAGKVLNGRIGWAAGAGLEYGFTPNWSARIEYLYSDFGNASVGLPTGARYDTAMNLQTVRIGVNRRIDWLGSG
ETAPFATVADPDSDRWEIHGQTTVVGQGYPSFRAPYSGANSLTPNAQFKSTWSSGLFANVRLWDGGELYLGPEFLQGFGL
SDTVGVAGFPNGEGQKSGFAFPHISPSRFYLRQTFGLGGEQEQLASSASQLSGKADISRLTLQVGRFSVLDAFDGNAYAH
DPRRDFMNWSIWASGAFDYAADKLGLTYGATAELNQKQWALRAGYFLMDAESNSNNFDMRLGQRGQYVAELETRYALFGQ
PGKLRTLAFLNSVYAGSYRETLDNPLLNLDISQTRRGRIKYGYALNLEQAVSDDIGVFGRWSWNDGKNEIMAFTDIDDSL
SGGVSIRGLRWGRPDDVIGIAGATNGLSRDHRDFLAAGGLGPLIGDGALNYRRENLLETYYAYAINRAWTATADYQFIVN
PAYNADRGPVSVFSARLHGEF
>Mature_661_residues
MIHPRRCATMRPIVTTALMLGGLVLPQAASAADALKALPSPAMDWSGFYVGAHAGYVRGHADARLQDPTFAASQSSGSGG
VTAGAQAGYNILTRAGVLFGVEADISFPSYLPANAVLSEFDNATSTAQQHIDFYGTLRARLGVAAGRWLGYVTGGLAYEH
ERYLTEPGAGKVLNGRIGWAAGAGLEYGFTPNWSARIEYLYSDFGNASVGLPTGARYDTAMNLQTVRIGVNRRIDWLGSG
ETAPFATVADPDSDRWEIHGQTTVVGQGYPSFRAPYSGANSLTPNAQFKSTWSSGLFANVRLWDGGELYLGPEFLQGFGL
SDTVGVAGFPNGEGQKSGFAFPHISPSRFYLRQTFGLGGEQEQLASSASQLSGKADISRLTLQVGRFSVLDAFDGNAYAH
DPRRDFMNWSIWASGAFDYAADKLGLTYGATAELNQKQWALRAGYFLMDAESNSNNFDMRLGQRGQYVAELETRYALFGQ
PGKLRTLAFLNSVYAGSYRETLDNPLLNLDISQTRRGRIKYGYALNLEQAVSDDIGVFGRWSWNDGKNEIMAFTDIDDSL
SGGVSIRGLRWGRPDDVIGIAGATNGLSRDHRDFLAAGGLGPLIGDGALNYRRENLLETYYAYAINRAWTATADYQFIVN
PAYNADRGPVSVFSARLHGEF

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 71548; Mature: 71548

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHPRRCATMRPIVTTALMLGGLVLPQAASAADALKALPSPAMDWSGFYVGAHAGYVRGH
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCEEECC
ADARLQDPTFAASQSSGSGGVTAGAQAGYNILTRAGVLFGVEADISFPSYLPANAVLSEF
CCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHH
DNATSTAQQHIDFYGTLRARLGVAAGRWLGYVTGGLAYEHERYLTEPGAGKVLNGRIGWA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHCCCCCCCCEEECCCCEE
AGAGLEYGFTPNWSARIEYLYSDFGNASVGLPTGARYDTAMNLQTVRIGVNRRIDWLGSG
ECCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCCCCCCCCEEEEEEECCCEEEECCCC
ETAPFATVADPDSDRWEIHGQTTVVGQGYPSFRAPYSGANSLTPNAQFKSTWSSGLFANV
CCCCEEEECCCCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEE
RLWDGGELYLGPEFLQGFGLSDTVGVAGFPNGEGQKSGFAFPHISPSRFYLRQTFGLGGE
EEECCCEEEECHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
QEQLASSASQLSGKADISRLTLQVGRFSVLDAFDGNAYAHDPRRDFMNWSIWASGAFDYA
HHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHCCEEEEECCCCHHH
ADKLGLTYGATAELNQKQWALRAGYFLMDAESNSNNFDMRLGQRGQYVAELETRYALFGQ
HHHCCCEECCCCCCCCHHHEEECCEEEEECCCCCCCEEEEECCCCCEEHHHHHHEEEECC
PGKLRTLAFLNSVYAGSYRETLDNPLLNLDISQTRRGRIKYGYALNLEQAVSDDIGVFGR
CCCCHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCEEEEEEEECHHHHHCCCCCCEEE
WSWNDGKNEIMAFTDIDDSLSGGVSIRGLRWGRPDDVIGIAGATNGLSRDHRDFLAAGGL
ECCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHCCCC
GPLIGDGALNYRRENLLETYYAYAINRAWTATADYQFIVNPAYNADRGPVSVFSARLHGE
CCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCCCCCHHHEEHHHCCC
F
C
>Mature Secondary Structure
MIHPRRCATMRPIVTTALMLGGLVLPQAASAADALKALPSPAMDWSGFYVGAHAGYVRGH
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCEEECC
ADARLQDPTFAASQSSGSGGVTAGAQAGYNILTRAGVLFGVEADISFPSYLPANAVLSEF
CCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHH
DNATSTAQQHIDFYGTLRARLGVAAGRWLGYVTGGLAYEHERYLTEPGAGKVLNGRIGWA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHCCCCCCCCEEECCCCEE
AGAGLEYGFTPNWSARIEYLYSDFGNASVGLPTGARYDTAMNLQTVRIGVNRRIDWLGSG
ECCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCCCCCCCCEEEEEEECCCEEEECCCC
ETAPFATVADPDSDRWEIHGQTTVVGQGYPSFRAPYSGANSLTPNAQFKSTWSSGLFANV
CCCCEEEECCCCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEE
RLWDGGELYLGPEFLQGFGLSDTVGVAGFPNGEGQKSGFAFPHISPSRFYLRQTFGLGGE
EEECCCEEEECHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
QEQLASSASQLSGKADISRLTLQVGRFSVLDAFDGNAYAHDPRRDFMNWSIWASGAFDYA
HHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHCCEEEEECCCCHHH
ADKLGLTYGATAELNQKQWALRAGYFLMDAESNSNNFDMRLGQRGQYVAELETRYALFGQ
HHHCCCEECCCCCCCCHHHEEECCEEEEECCCCCCCEEEEECCCCCEEHHHHHHEEEECC
PGKLRTLAFLNSVYAGSYRETLDNPLLNLDISQTRRGRIKYGYALNLEQAVSDDIGVFGR
CCCCHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCEEEEEEEECHHHHHCCCCCCEEE
WSWNDGKNEIMAFTDIDDSLSGGVSIRGLRWGRPDDVIGIAGATNGLSRDHRDFLAAGGL
ECCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHCCCC
GPLIGDGALNYRRENLLETYYAYAINRAWTATADYQFIVNPAYNADRGPVSVFSARLHGE
CCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCCCCCHHHEEHHHCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]