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The map label for this gene is yfmJ [H]

Identifier: 86747689

GI number: 86747689

Start: 633423

End: 634421

Strand: Reverse

Name: yfmJ [H]

Synonym: RPB_0563

Alternate gene names: 86747689

Gene position: 634421-633423 (Counterclockwise)

Preceding gene: 86747690

Following gene: 86747688

Centisome position: 11.9

GC content: 67.37

Gene sequence:

>999_bases
ATGACCGCCGTCAACCGCCAGGTGCTGCTGATCGAGAAGCCGAAGGAGAAACTCGGCCTTGAGCATTTCCGCATGGCGGA
AGCGGCGATGCCGGAGCCGAAGGACGGCGAGGCGCTGGTCCGCGTGCGCTACATTTCGCTCGACGCCGCCAACCGCGCCT
GGATGCAGGGCGCGACCTATCGGGCCGCGGTCGAGACCGACAGCGTGATGCCCGGCGGCGGCATCGCCGAGGTTGTCAGT
TCGAAAGCGCCGGGATTGTCGCCCGGCGACATCGTGTTCGCCGACACCGGCTGGCAGGACTACGCGGCGCTGCCGGCCAA
GCATCTCACCAAGCTGCCGAAGGTCGAGCCGCTGACGCATCTCCTCAGCGTCTACGGCATCGCCGGCTTGACCGCTTATT
TCGGCCTGCTCGATATCGGCCAGCCGCGCGCCGGCGAGACCGTCGTGGTGTCGGCCGCGGCAGGCTCGGTCGGCTCGATC
GTCGGGCAGATTGCGAAACTCAAGGGCTGCCGTGTCGTCGGCATCGCCGGCGGCAAACAGAAGTGCGACTGGCTGGTCAA
CGAGCTCGGCTTCGACGCCGCGGTCGACTACAAGGACGGCGCGCTGTTCAAGGCGCTGCGCGCCGCGGCGCCGAACGGCA
TCGACGTGTATTTCGACAATGTCGGCGGCGACATTCTCGAAGCCTGTCTGGCGCAGATGAATCTCAAGGGCCGCATCGCC
TGCTGCGGCGCGGTCTCGCAATACGACCGCACGCCGTCCGCCACCGGCCCGCGCGGCATCCCCGGCCTGATCGTGGTGAA
GCGCCTGATCATGCAGGGCTTCATCGTGATGGACTACATGGACCAACGCGACGAGGCGGTCGCCAAGCTGCAAGGCTGGG
TCGAGAGCGGCAAGCTCAAGGTGCAGGAAGACGTCATCGACGGCCTGGAGAACACGCCGGCCGCGCTGATCGGCCTGCTG
GCGGGCGAGAACCGCGGCAAGCGGATGGTGCGGGTGTGA

Upstream 100 bases:

>100_bases
GCGGTTCTTCTGACGCATGATTTGAACATTGCGCATCGCGGCGGCGCCGATTAGCGTCCGCCGCCGACGCGACAACAACA
CTGCACTCAGGGAGAGCCAC

Downstream 100 bases:

>100_bases
CCGAGGCGCATACCACAGCCGAGGTCCATACTGGAGTGAGACTCATACGGAACTAACAAGACGTCATGGCCGGGCTCGTC
CCGGCCATCCACGTTTCTGC

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MTAVNRQVLLIEKPKEKLGLEHFRMAEAAMPEPKDGEALVRVRYISLDAANRAWMQGATYRAAVETDSVMPGGGIAEVVS
SKAPGLSPGDIVFADTGWQDYAALPAKHLTKLPKVEPLTHLLSVYGIAGLTAYFGLLDIGQPRAGETVVVSAAAGSVGSI
VGQIAKLKGCRVVGIAGGKQKCDWLVNELGFDAAVDYKDGALFKALRAAAPNGIDVYFDNVGGDILEACLAQMNLKGRIA
CCGAVSQYDRTPSATGPRGIPGLIVVKRLIMQGFIVMDYMDQRDEAVAKLQGWVESGKLKVQEDVIDGLENTPAALIGLL
AGENRGKRMVRV

Sequences:

>Translated_332_residues
MTAVNRQVLLIEKPKEKLGLEHFRMAEAAMPEPKDGEALVRVRYISLDAANRAWMQGATYRAAVETDSVMPGGGIAEVVS
SKAPGLSPGDIVFADTGWQDYAALPAKHLTKLPKVEPLTHLLSVYGIAGLTAYFGLLDIGQPRAGETVVVSAAAGSVGSI
VGQIAKLKGCRVVGIAGGKQKCDWLVNELGFDAAVDYKDGALFKALRAAAPNGIDVYFDNVGGDILEACLAQMNLKGRIA
CCGAVSQYDRTPSATGPRGIPGLIVVKRLIMQGFIVMDYMDQRDEAVAKLQGWVESGKLKVQEDVIDGLENTPAALIGLL
AGENRGKRMVRV
>Mature_331_residues
TAVNRQVLLIEKPKEKLGLEHFRMAEAAMPEPKDGEALVRVRYISLDAANRAWMQGATYRAAVETDSVMPGGGIAEVVSS
KAPGLSPGDIVFADTGWQDYAALPAKHLTKLPKVEPLTHLLSVYGIAGLTAYFGLLDIGQPRAGETVVVSAAAGSVGSIV
GQIAKLKGCRVVGIAGGKQKCDWLVNELGFDAAVDYKDGALFKALRAAAPNGIDVYFDNVGGDILEACLAQMNLKGRIAC
CGAVSQYDRTPSATGPRGIPGLIVVKRLIMQGFIVMDYMDQRDEAVAKLQGWVESGKLKVQEDVIDGLENTPAALIGLLA
GENRGKRMVRV

Specific function: Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226059159, Length=315, Percent_Identity=42.2222222222222, Blast_Score=225, Evalue=4e-59,
Organism=Homo sapiens, GI226059133, Length=315, Percent_Identity=42.2222222222222, Blast_Score=225, Evalue=4e-59,
Organism=Homo sapiens, GI226246682, Length=329, Percent_Identity=38.2978723404255, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI226246680, Length=329, Percent_Identity=38.2978723404255, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI22748929, Length=329, Percent_Identity=38.2978723404255, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI226056130, Length=288, Percent_Identity=41.3194444444444, Blast_Score=191, Evalue=6e-49,
Organism=Homo sapiens, GI28557745, Length=334, Percent_Identity=29.940119760479, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI194239674, Length=241, Percent_Identity=25.7261410788382, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI13236495, Length=241, Percent_Identity=25.7261410788382, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI226510941, Length=334, Percent_Identity=42.5149700598802, Blast_Score=253, Evalue=1e-68,
Organism=Caenorhabditis elegans, GI133901712, Length=361, Percent_Identity=34.0720221606648, Blast_Score=177, Evalue=5e-45,
Organism=Caenorhabditis elegans, GI133901710, Length=361, Percent_Identity=34.0720221606648, Blast_Score=177, Evalue=6e-45,
Organism=Saccharomyces cerevisiae, GI6323504, Length=329, Percent_Identity=32.8267477203647, Blast_Score=153, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35264; Mature: 35133

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVNRQVLLIEKPKEKLGLEHFRMAEAAMPEPKDGEALVRVRYISLDAANRAWMQGATY
CCCCCCEEEEEECCHHHHCHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCHHHHCCCCE
RAAVETDSVMPGGGIAEVVSSKAPGLSPGDIVFADTGWQDYAALPAKHLTKLPKVEPLTH
EEEECCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCHHHHHCCHHHHHHCCCCCHHHH
LLSVYGIAGLTAYFGLLDIGQPRAGETVVVSAAAGSVGSIVGQIAKLKGCRVVGIAGGKQ
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCH
KCDWLVNELGFDAAVDYKDGALFKALRAAAPNGIDVYFDNVGGDILEACLAQMNLKGRIA
HHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEE
CCGAVSQYDRTPSATGPRGIPGLIVVKRLIMQGFIVMDYMDQRDEAVAKLQGWVESGKLK
EECCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCHHEEHHHCCHHHHHHHHHHHHHCCCEE
VQEDVIDGLENTPAALIGLLAGENRGKRMVRV
EHHHHHCCCCCCHHHHHHHHHCCCCCCEECCC
>Mature Secondary Structure 
TAVNRQVLLIEKPKEKLGLEHFRMAEAAMPEPKDGEALVRVRYISLDAANRAWMQGATY
CCCCCEEEEEECCHHHHCHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCHHHHCCCCE
RAAVETDSVMPGGGIAEVVSSKAPGLSPGDIVFADTGWQDYAALPAKHLTKLPKVEPLTH
EEEECCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCHHHHHCCHHHHHHCCCCCHHHH
LLSVYGIAGLTAYFGLLDIGQPRAGETVVVSAAAGSVGSIVGQIAKLKGCRVVGIAGGKQ
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCH
KCDWLVNELGFDAAVDYKDGALFKALRAAAPNGIDVYFDNVGGDILEACLAQMNLKGRIA
HHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEE
CCGAVSQYDRTPSATGPRGIPGLIVVKRLIMQGFIVMDYMDQRDEAVAKLQGWVESGKLK
EECCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCHHEEHHHCCHHHHHHHHHHHHHCCCEE
VQEDVIDGLENTPAALIGLLAGENRGKRMVRV
EHHHHHCCCCCCHHHHHHHHHCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]