| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yidB [C]
Identifier: 86747688
GI number: 86747688
Start: 632028
End: 632633
Strand: Reverse
Name: yidB [C]
Synonym: RPB_0562
Alternate gene names: 86747688
Gene position: 632633-632028 (Counterclockwise)
Preceding gene: 86747689
Following gene: 86747687
Centisome position: 11.87
GC content: 69.31
Gene sequence:
>606_bases ATGGGTTTGATGGATATCCTCAATGGGATGCAGAACGGCCCGCGCGGCCCCGCCGACCCCAACGACAAGAGCGGCGGGAT GTCCAAGGTCACCATGGCGATCCTCGCGCTGCTGGCCTACAAGGCCTACAAGCATGTGACGGCGCCGGATGACCAGGCCC CGGCCGGCCAGGCGCGCCCGACCTCGGTGCCGTCGTCCCGCCCGCCCTTGCCGCGCGACACCATCAATGCCGGAATGCCC GGCGGCGGATTTGGCGGCGGCGGGCTCGGCGATCTGCTCAAGGGCGGACTCGGCGGTTTGCTCGCGGGCGGCGCGGCCGG CAGCATCCTGTCCGGCGGGCTCGGCGATCTGCTCAAGCAATTCCAGACCAGCGGCCTCGGCGACGCCGCCGAATCGTGGG TCGGGCGCGGTGAGAACAAGTCGATCGGCCCGAACGATCTCGCCAATGCGCTCGGCGCCGATCAGCTCGACATGCTCACC CAGCAAACCGGAATGTCGCGCGACGAGCTGCTCGACGGCCTCAGCCAGCAATTGCCGCAGTTCGTCGATCAGCTGACGCC GGACGGCCGGCTGCCGACCGAGGACGAAGCCTCGCGCTGGGTCTGA
Upstream 100 bases:
>100_bases CTCGCCGTGGCCGGCTCCTATCTGGTTCCGGGCGGTGAACGAAACGTCCGATCCGGCGTTGCCGTCGGCTCGAACCATGA CGGTTCAAAGGGAGGCCACG
Downstream 100 bases:
>100_bases TCAGCCGCGACGAACCTATCGACGCAAGCGTTTCGGAAAGGACGGTTGCCCATGACTGGAATTCTCTGGATCATTCTGGT CGGCTTCGTCGCCGGCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MGLMDILNGMQNGPRGPADPNDKSGGMSKVTMAILALLAYKAYKHVTAPDDQAPAGQARPTSVPSSRPPLPRDTINAGMP GGGFGGGGLGDLLKGGLGGLLAGGAAGSILSGGLGDLLKQFQTSGLGDAAESWVGRGENKSIGPNDLANALGADQLDMLT QQTGMSRDELLDGLSQQLPQFVDQLTPDGRLPTEDEASRWV
Sequences:
>Translated_201_residues MGLMDILNGMQNGPRGPADPNDKSGGMSKVTMAILALLAYKAYKHVTAPDDQAPAGQARPTSVPSSRPPLPRDTINAGMP GGGFGGGGLGDLLKGGLGGLLAGGAAGSILSGGLGDLLKQFQTSGLGDAAESWVGRGENKSIGPNDLANALGADQLDMLT QQTGMSRDELLDGLSQQLPQFVDQLTPDGRLPTEDEASRWV >Mature_200_residues GLMDILNGMQNGPRGPADPNDKSGGMSKVTMAILALLAYKAYKHVTAPDDQAPAGQARPTSVPSSRPPLPRDTINAGMPG GGFGGGGLGDLLKGGLGGLLAGGAAGSILSGGLGDLLKQFQTSGLGDAAESWVGRGENKSIGPNDLANALGADQLDMLTQ QTGMSRDELLDGLSQQLPQFVDQLTPDGRLPTEDEASRWV
Specific function: Unknown
COG id: COG3753
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20492; Mature: 20361
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLMDILNGMQNGPRGPADPNDKSGGMSKVTMAILALLAYKAYKHVTAPDDQAPAGQARP CCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TSVPSSRPPLPRDTINAGMPGGGFGGGGLGDLLKGGLGGLLAGGAAGSILSGGLGDLLKQ CCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHH FQTSGLGDAAESWVGRGENKSIGPNDLANALGADQLDMLTQQTGMSRDELLDGLSQQLPQ HHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHH FVDQLTPDGRLPTEDEASRWV HHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GLMDILNGMQNGPRGPADPNDKSGGMSKVTMAILALLAYKAYKHVTAPDDQAPAGQARP CHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TSVPSSRPPLPRDTINAGMPGGGFGGGGLGDLLKGGLGGLLAGGAAGSILSGGLGDLLKQ CCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHH FQTSGLGDAAESWVGRGENKSIGPNDLANALGADQLDMLTQQTGMSRDELLDGLSQQLPQ HHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHH FVDQLTPDGRLPTEDEASRWV HHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA