Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is yidB [C]

Identifier: 86747688

GI number: 86747688

Start: 632028

End: 632633

Strand: Reverse

Name: yidB [C]

Synonym: RPB_0562

Alternate gene names: 86747688

Gene position: 632633-632028 (Counterclockwise)

Preceding gene: 86747689

Following gene: 86747687

Centisome position: 11.87

GC content: 69.31

Gene sequence:

>606_bases
ATGGGTTTGATGGATATCCTCAATGGGATGCAGAACGGCCCGCGCGGCCCCGCCGACCCCAACGACAAGAGCGGCGGGAT
GTCCAAGGTCACCATGGCGATCCTCGCGCTGCTGGCCTACAAGGCCTACAAGCATGTGACGGCGCCGGATGACCAGGCCC
CGGCCGGCCAGGCGCGCCCGACCTCGGTGCCGTCGTCCCGCCCGCCCTTGCCGCGCGACACCATCAATGCCGGAATGCCC
GGCGGCGGATTTGGCGGCGGCGGGCTCGGCGATCTGCTCAAGGGCGGACTCGGCGGTTTGCTCGCGGGCGGCGCGGCCGG
CAGCATCCTGTCCGGCGGGCTCGGCGATCTGCTCAAGCAATTCCAGACCAGCGGCCTCGGCGACGCCGCCGAATCGTGGG
TCGGGCGCGGTGAGAACAAGTCGATCGGCCCGAACGATCTCGCCAATGCGCTCGGCGCCGATCAGCTCGACATGCTCACC
CAGCAAACCGGAATGTCGCGCGACGAGCTGCTCGACGGCCTCAGCCAGCAATTGCCGCAGTTCGTCGATCAGCTGACGCC
GGACGGCCGGCTGCCGACCGAGGACGAAGCCTCGCGCTGGGTCTGA

Upstream 100 bases:

>100_bases
CTCGCCGTGGCCGGCTCCTATCTGGTTCCGGGCGGTGAACGAAACGTCCGATCCGGCGTTGCCGTCGGCTCGAACCATGA
CGGTTCAAAGGGAGGCCACG

Downstream 100 bases:

>100_bases
TCAGCCGCGACGAACCTATCGACGCAAGCGTTTCGGAAAGGACGGTTGCCCATGACTGGAATTCTCTGGATCATTCTGGT
CGGCTTCGTCGCCGGCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MGLMDILNGMQNGPRGPADPNDKSGGMSKVTMAILALLAYKAYKHVTAPDDQAPAGQARPTSVPSSRPPLPRDTINAGMP
GGGFGGGGLGDLLKGGLGGLLAGGAAGSILSGGLGDLLKQFQTSGLGDAAESWVGRGENKSIGPNDLANALGADQLDMLT
QQTGMSRDELLDGLSQQLPQFVDQLTPDGRLPTEDEASRWV

Sequences:

>Translated_201_residues
MGLMDILNGMQNGPRGPADPNDKSGGMSKVTMAILALLAYKAYKHVTAPDDQAPAGQARPTSVPSSRPPLPRDTINAGMP
GGGFGGGGLGDLLKGGLGGLLAGGAAGSILSGGLGDLLKQFQTSGLGDAAESWVGRGENKSIGPNDLANALGADQLDMLT
QQTGMSRDELLDGLSQQLPQFVDQLTPDGRLPTEDEASRWV
>Mature_200_residues
GLMDILNGMQNGPRGPADPNDKSGGMSKVTMAILALLAYKAYKHVTAPDDQAPAGQARPTSVPSSRPPLPRDTINAGMPG
GGFGGGGLGDLLKGGLGGLLAGGAAGSILSGGLGDLLKQFQTSGLGDAAESWVGRGENKSIGPNDLANALGADQLDMLTQ
QTGMSRDELLDGLSQQLPQFVDQLTPDGRLPTEDEASRWV

Specific function: Unknown

COG id: COG3753

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20492; Mature: 20361

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLMDILNGMQNGPRGPADPNDKSGGMSKVTMAILALLAYKAYKHVTAPDDQAPAGQARP
CCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
TSVPSSRPPLPRDTINAGMPGGGFGGGGLGDLLKGGLGGLLAGGAAGSILSGGLGDLLKQ
CCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHH
FQTSGLGDAAESWVGRGENKSIGPNDLANALGADQLDMLTQQTGMSRDELLDGLSQQLPQ
HHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
FVDQLTPDGRLPTEDEASRWV
HHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GLMDILNGMQNGPRGPADPNDKSGGMSKVTMAILALLAYKAYKHVTAPDDQAPAGQARP
CHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
TSVPSSRPPLPRDTINAGMPGGGFGGGGLGDLLKGGLGGLLAGGAAGSILSGGLGDLLKQ
CCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHH
FQTSGLGDAAESWVGRGENKSIGPNDLANALGADQLDMLTQQTGMSRDELLDGLSQQLPQ
HHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
FVDQLTPDGRLPTEDEASRWV
HHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA