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The map label for this gene is yfgC [H]

Identifier: 86747678

GI number: 86747678

Start: 621810

End: 623303

Strand: Reverse

Name: yfgC [H]

Synonym: RPB_0552

Alternate gene names: 86747678

Gene position: 623303-621810 (Counterclockwise)

Preceding gene: 86747679

Following gene: 86747672

Centisome position: 11.69

GC content: 68.21

Gene sequence:

>1494_bases
GTGATCGCATCCGAGGGACGGCGCAGCATCTGGAGAAGCCGCCGCTGGCTGGCTGTGCCTGTCCTGGCGGGCGCGCTGGC
GCTGGCCGGCTGCGGCGATTTTCGCCGCTTCGAGACCGCGTCGATTCCCTCCAGCACGCCGGCGGCAAAGCCGTCGCGTC
CGGCGGCGCAATCGCCGGCGGCCGAGCGCGAGCACGAGCGCATCCTCGCCACCTATGGCGGCGCCTATGACGATCCGAGG
CTCGAAGCGCTGATCACCGCGACGGTCGATCGGCTGGTGGCGGCGTCCGACCGTCCCGACCTCACCTACAAGGTGACGAT
CCTGAATTCCGGCGCCGTCAACGCCTTCGCGCTGCCGACCGGGCAGCTCTACGTCACCCGCGGGCTGGTCGCGCTCGCCA
GCGACACCTCGGAACTGTCGTCGGTGCTGTCGCACGAGATGGCGCATGTGCTGGCCAAGCACGCCGCGATCCGGGAGGAC
CAGGCGCGCCAGGCGGCGCTGGTCACCCGCGTCGTCACCGACATGGGCACCGATCCGGAGATGACCGCGCTGGCGCTGGC
CAAGACCAAGCTGTCGATGGCGAGCTTCTCGCGGCAGCAGGAGCTCGAGGCCGACGGCATCGGCGTCGGCATCTCGGCGC
GCGCCCAGTTCGATCCGTTCGGAGCTTCGCGTTTCCTCACCGCGATGGAGCGCAACGCGGCGCTGAAGGCGGGCCGCGGC
GATGCGCGCTCGCAGGACTTCCTGGCGTCGCACCCGGCGACGCCGGAGCGGGTGCGCAACGCGCAGAACAACGCCCGGCA
ATACGCCTCGCCGGAGCAGACCGCCAAGGGCGAGCGCGACCGTGAGACCTATCTCAACGCCATCGACAACATCGTCTATG
GCGAGGACCCGAGCGAGGGCTTCGTCCGCGGCCGCCGCTTCCTGCATCCCAAGCTCGGCTTCACCTTCCAGGTGCCGGAG
AGCTTCACGCTCGACAACACCGCGCAGGCGGTGATCGGCATCCGCGAAGGCGGCAGCCAGGCGATGCGGTTCGACGTGGT
GCGGGTGCCGGCGGAACAGTCGCTCGGCGACTACCTCAATTCCGGCTGGATGGAGAACGTCGACAAGAGTTCGACCGAAG
AACTAAGCATCAACGGCTTTCCGACCGCCTCGGTGGCGGCGCGCGGCGATCAGTGGCAGTTCAAGGTCTATGCGTTGCGG
TTCGGCAGCGACGTCTATCGCTTCATCTTCGCGACCCGGCAGAAATCGGCCGAAAGCGACCGCAATTCGCGCGACACCGT
GAATTCGTTCCGACGTCTGACGCTCGACGAGATCCAGGCGGCGCGGCCGTTGCGGATCAAGGTGATCACCGTACAGCCGG
GCGACACGGTGGAATCGCTGTCGCACCGGATGTCCGGCGTCGACCGCCCGCTCGACCGCTTCCGGGTGCTGAACGGCCTC
GACGCCAACGCCACCGTGAAGCCGCGCGATCTGGTCAAGATCGTGGTGGATTAA

Upstream 100 bases:

>100_bases
GAGGCTGGGTCGAGCGGCGCTCCGGCCCCCAGATCCGAATTCGCGAGGTGGGACAGATCGAGATGCCGGGCGCGCGCTAG
CGCCCGGAGAGAGCCAGCAC

Downstream 100 bases:

>100_bases
TGCGCTTCATCGACTGAGTGAAGCAATGCGGCCTGCTCGCATGCAGAGTCGTCATCCTGAGGCGCGCGCGTAGCGCGCCT
CAGGATGCGGCCCCGAGGCG

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MIASEGRRSIWRSRRWLAVPVLAGALALAGCGDFRRFETASIPSSTPAAKPSRPAAQSPAAEREHERILATYGGAYDDPR
LEALITATVDRLVAASDRPDLTYKVTILNSGAVNAFALPTGQLYVTRGLVALASDTSELSSVLSHEMAHVLAKHAAIRED
QARQAALVTRVVTDMGTDPEMTALALAKTKLSMASFSRQQELEADGIGVGISARAQFDPFGASRFLTAMERNAALKAGRG
DARSQDFLASHPATPERVRNAQNNARQYASPEQTAKGERDRETYLNAIDNIVYGEDPSEGFVRGRRFLHPKLGFTFQVPE
SFTLDNTAQAVIGIREGGSQAMRFDVVRVPAEQSLGDYLNSGWMENVDKSSTEELSINGFPTASVAARGDQWQFKVYALR
FGSDVYRFIFATRQKSAESDRNSRDTVNSFRRLTLDEIQAARPLRIKVITVQPGDTVESLSHRMSGVDRPLDRFRVLNGL
DANATVKPRDLVKIVVD

Sequences:

>Translated_497_residues
MIASEGRRSIWRSRRWLAVPVLAGALALAGCGDFRRFETASIPSSTPAAKPSRPAAQSPAAEREHERILATYGGAYDDPR
LEALITATVDRLVAASDRPDLTYKVTILNSGAVNAFALPTGQLYVTRGLVALASDTSELSSVLSHEMAHVLAKHAAIRED
QARQAALVTRVVTDMGTDPEMTALALAKTKLSMASFSRQQELEADGIGVGISARAQFDPFGASRFLTAMERNAALKAGRG
DARSQDFLASHPATPERVRNAQNNARQYASPEQTAKGERDRETYLNAIDNIVYGEDPSEGFVRGRRFLHPKLGFTFQVPE
SFTLDNTAQAVIGIREGGSQAMRFDVVRVPAEQSLGDYLNSGWMENVDKSSTEELSINGFPTASVAARGDQWQFKVYALR
FGSDVYRFIFATRQKSAESDRNSRDTVNSFRRLTLDEIQAARPLRIKVITVQPGDTVESLSHRMSGVDRPLDRFRVLNGL
DANATVKPRDLVKIVVD
>Mature_497_residues
MIASEGRRSIWRSRRWLAVPVLAGALALAGCGDFRRFETASIPSSTPAAKPSRPAAQSPAAEREHERILATYGGAYDDPR
LEALITATVDRLVAASDRPDLTYKVTILNSGAVNAFALPTGQLYVTRGLVALASDTSELSSVLSHEMAHVLAKHAAIRED
QARQAALVTRVVTDMGTDPEMTALALAKTKLSMASFSRQQELEADGIGVGISARAQFDPFGASRFLTAMERNAALKAGRG
DARSQDFLASHPATPERVRNAQNNARQYASPEQTAKGERDRETYLNAIDNIVYGEDPSEGFVRGRRFLHPKLGFTFQVPE
SFTLDNTAQAVIGIREGGSQAMRFDVVRVPAEQSLGDYLNSGWMENVDKSSTEELSINGFPTASVAARGDQWQFKVYALR
FGSDVYRFIFATRQKSAESDRNSRDTVNSFRRLTLDEIQAARPLRIKVITVQPGDTVESLSHRMSGVDRPLDRFRVLNGL
DANATVKPRDLVKIVVD

Specific function: Unknown

COG id: COG4784

COG function: function code R; Putative Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=201, Percent_Identity=32.3383084577114, Blast_Score=90, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6322940, Length=204, Percent_Identity=26.9607843137255, Blast_Score=77, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 54418; Mature: 54418

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIASEGRRSIWRSRRWLAVPVLAGALALAGCGDFRRFETASIPSSTPAAKPSRPAAQSPA
CCCCCCHHHHHHCCCCEEHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
AEREHERILATYGGAYDDPRLEALITATVDRLVAASDRPDLTYKVTILNSGAVNAFALPT
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEECCC
GQLYVTRGLVALASDTSELSSVLSHEMAHVLAKHAAIREDQARQAALVTRVVTDMGTDPE
CCEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
MTALALAKTKLSMASFSRQQELEADGIGVGISARAQFDPFGASRFLTAMERNAALKAGRG
HHHHHHHHHHHHHHHHHHHHHCCCCCCEECEECCCCCCCCCHHHHHHHHHHHHHHCCCCC
DARSQDFLASHPATPERVRNAQNNARQYASPEQTAKGERDRETYLNAIDNIVYGEDPSEG
CCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCHH
FVRGRRFLHPKLGFTFQVPESFTLDNTAQAVIGIREGGSQAMRFDVVRVPAEQSLGDYLN
HHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCHHHHHHHHHH
SGWMENVDKSSTEELSINGFPTASVAARGDQWQFKVYALRFGSDVYRFIFATRQKSAESD
CCCHHCCCCCCCCEEEECCCCCHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCC
RNSRDTVNSFRRLTLDEIQAARPLRIKVITVQPGDTVESLSHRMSGVDRPLDRFRVLNGL
CCCHHHHHHHHHHCHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCC
DANATVKPRDLVKIVVD
CCCCEECHHHHEEEECC
>Mature Secondary Structure
MIASEGRRSIWRSRRWLAVPVLAGALALAGCGDFRRFETASIPSSTPAAKPSRPAAQSPA
CCCCCCHHHHHHCCCCEEHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
AEREHERILATYGGAYDDPRLEALITATVDRLVAASDRPDLTYKVTILNSGAVNAFALPT
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEECCC
GQLYVTRGLVALASDTSELSSVLSHEMAHVLAKHAAIREDQARQAALVTRVVTDMGTDPE
CCEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
MTALALAKTKLSMASFSRQQELEADGIGVGISARAQFDPFGASRFLTAMERNAALKAGRG
HHHHHHHHHHHHHHHHHHHHHCCCCCCEECEECCCCCCCCCHHHHHHHHHHHHHHCCCCC
DARSQDFLASHPATPERVRNAQNNARQYASPEQTAKGERDRETYLNAIDNIVYGEDPSEG
CCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCHH
FVRGRRFLHPKLGFTFQVPESFTLDNTAQAVIGIREGGSQAMRFDVVRVPAEQSLGDYLN
HHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCHHHHHHHHHH
SGWMENVDKSSTEELSINGFPTASVAARGDQWQFKVYALRFGSDVYRFIFATRQKSAESD
CCCHHCCCCCCCCEEEECCCCCHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCC
RNSRDTVNSFRRLTLDEIQAARPLRIKVITVQPGDTVESLSHRMSGVDRPLDRFRVLNGL
CCCHHHHHHHHHHCHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCC
DANATVKPRDLVKIVVD
CCCCEECHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]