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The map label for this gene is 86747679

Identifier: 86747679

GI number: 86747679

Start: 623324

End: 624133

Strand: Reverse

Name: 86747679

Synonym: RPB_0553

Alternate gene names: NA

Gene position: 624133-623324 (Counterclockwise)

Preceding gene: 86747683

Following gene: 86747678

Centisome position: 11.71

GC content: 69.51

Gene sequence:

>810_bases
ATGGCTGCGGCGACGACGACAACGCGCAGGCGCAGACGATGCGTCGCCATGATCCGGTACGTCGCGATCATGGTCGTCGC
GCTGCCGAGCATCGGCGGCACGGCACGCGCGGCTTGCGTCGGTCTTCCCGAACAGGGCGACGGCGTCGTCGCCGCGGTCG
ACGACGGCCGCCATGTTCGCCTGCAGGACGGCCGCGAGATCCGGCTCGCCGGCATCGAGATCGAATCGTCCCGACAGGCC
GAGGCGACGGCCGCGCTGGCGTCGCTCGCACGCGCACGTCGCGTCGGGCTGCGCGGCGCGGAGGATGTGCCGGACCGTTA
CGGCCGGCAGCCGGCTTTCGTGGTCGTGGATGACGACGCGACGTCGCTGCAGGCCCGGCTGCTCGGCGCCGGCGAGGCCA
TGGTCGGGCTCGGGATCGCGGACAGCGACTGCCGCGCCGAGCTGCTGGCCGCGGAGGCGACGGCGCGAATGGCGCAACGC
GGGCTCTGGGCCGATCCGACAGCCCTCAAAAACGCCGGAAATCCAGGCGATATCATGGCCCGGGTCGGGCGATTCACGGT
GATCGAAGGCAGGATTCTGTCGGTCCGGGAAACCGGCGGCACGATCTATCTGAACTTCGGCCGGCGCTGGACTCGGGACT
TTGCGGTGACTATTTCAAGGCGCATATTGGGGTCTTTCGAGGCCGCGGGCATTTCGCCCAAGTCCTTGGAGAACAAGCGA
ATCCGGGTCCGAGGCTGGGTCGAGCGGCGCTCCGGCCCCCAGATCCGAATTCGCGAGGTGGGACAGATCGAGATGCCGGG
CGCGCGCTAG

Upstream 100 bases:

>100_bases
ACTTGCGTGATCACAACACGCTTAGTAAGCGAAACGCCGCAGGCCGTCGCGAGCGCGGGCATCGATCGCGCCGGAACGGC
GCTGATTGCGGGTGCGTGCG

Downstream 100 bases:

>100_bases
CGCCCGGAGAGAGCCAGCACGTGATCGCATCCGAGGGACGGCGCAGCATCTGGAGAAGCCGCCGCTGGCTGGCTGTGCCT
GTCCTGGCGGGCGCGCTGGC

Product: nuclease (SNase-like)

Products: NA

Alternate protein names: SNase-Like Nuclease; Nuclease SNase-Like

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MAAATTTTRRRRRCVAMIRYVAIMVVALPSIGGTARAACVGLPEQGDGVVAAVDDGRHVRLQDGREIRLAGIEIESSRQA
EATAALASLARARRVGLRGAEDVPDRYGRQPAFVVVDDDATSLQARLLGAGEAMVGLGIADSDCRAELLAAEATARMAQR
GLWADPTALKNAGNPGDIMARVGRFTVIEGRILSVRETGGTIYLNFGRRWTRDFAVTISRRILGSFEAAGISPKSLENKR
IRVRGWVERRSGPQIRIREVGQIEMPGAR

Sequences:

>Translated_269_residues
MAAATTTTRRRRRCVAMIRYVAIMVVALPSIGGTARAACVGLPEQGDGVVAAVDDGRHVRLQDGREIRLAGIEIESSRQA
EATAALASLARARRVGLRGAEDVPDRYGRQPAFVVVDDDATSLQARLLGAGEAMVGLGIADSDCRAELLAAEATARMAQR
GLWADPTALKNAGNPGDIMARVGRFTVIEGRILSVRETGGTIYLNFGRRWTRDFAVTISRRILGSFEAAGISPKSLENKR
IRVRGWVERRSGPQIRIREVGQIEMPGAR
>Mature_268_residues
AAATTTTRRRRRCVAMIRYVAIMVVALPSIGGTARAACVGLPEQGDGVVAAVDDGRHVRLQDGREIRLAGIEIESSRQAE
ATAALASLARARRVGLRGAEDVPDRYGRQPAFVVVDDDATSLQARLLGAGEAMVGLGIADSDCRAELLAAEATARMAQRG
LWADPTALKNAGNPGDIMARVGRFTVIEGRILSVRETGGTIYLNFGRRWTRDFAVTISRRILGSFEAAGISPKSLENKRI
RVRGWVERRSGPQIRIREVGQIEMPGAR

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29002; Mature: 28871

Theoretical pI: Translated: 11.38; Mature: 11.38

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAATTTTRRRRRCVAMIRYVAIMVVALPSIGGTARAACVGLPEQGDGVVAAVDDGRHVR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEECCCCEEE
LQDGREIRLAGIEIESSRQAEATAALASLARARRVGLRGAEDVPDRYGRQPAFVVVDDDA
ECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCCC
TSLQARLLGAGEAMVGLGIADSDCRAELLAAEATARMAQRGLWADPTALKNAGNPGDIMA
HHHHHHHEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHH
RVGRFTVIEGRILSVRETGGTIYLNFGRRWTRDFAVTISRRILGSFEAAGISPKSLENKR
HCCCEEEECCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCE
IRVRGWVERRSGPQIRIREVGQIEMPGAR
EEEEEEEECCCCCEEEEEECCEEECCCCC
>Mature Secondary Structure 
AAATTTTRRRRRCVAMIRYVAIMVVALPSIGGTARAACVGLPEQGDGVVAAVDDGRHVR
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEECCCCEEE
LQDGREIRLAGIEIESSRQAEATAALASLARARRVGLRGAEDVPDRYGRQPAFVVVDDDA
ECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCCC
TSLQARLLGAGEAMVGLGIADSDCRAELLAAEATARMAQRGLWADPTALKNAGNPGDIMA
HHHHHHHEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHH
RVGRFTVIEGRILSVRETGGTIYLNFGRRWTRDFAVTISRRILGSFEAAGISPKSLENKR
HCCCEEEECCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCE
IRVRGWVERRSGPQIRIREVGQIEMPGAR
EEEEEEEECCCCCEEEEEECCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA