| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is bolA [C]
Identifier: 86747664
GI number: 86747664
Start: 603920
End: 604189
Strand: Reverse
Name: bolA [C]
Synonym: RPB_0538
Alternate gene names: 86747664
Gene position: 604189-603920 (Counterclockwise)
Preceding gene: 86747666
Following gene: 86747660
Centisome position: 11.33
GC content: 62.22
Gene sequence:
>270_bases ATGGGCGTCAAGGACAGTCTCACACAGAAGTTGCGCGAAGCTTTCACGCCGGAAAGCCTCGAGGTGATCGACGAATCCAA CCTTCATGAAGGTCATGCGGGCCATTCCGGCCGCAGCGAGTCGCATTTCCGGGTGAATATCGTGTCGGGCGCATTCGCCG GCAAGAGCCGTATCGATCGCCACCGCATGGTCAACGAATTGCTGGCGGCGGAACTTTCGGGCGGCGTCCACGCGCTGGCG CTGAAGGCCAGGGCGCCGGGCGAAGCGTAA
Upstream 100 bases:
>100_bases GACTTTGACTACGCCTCGGGCCGAGCTTCAAGTCTTGACATTATCAGCAAGCCCCGGGTTGATGGTGTGAGCAGGCGGCG AACCAACGATCGGTCGGACC
Downstream 100 bases:
>100_bases GGGAGGCGCGCCCGCGGCTCACGCCGCGGGGCCGCCGATGCGCGCGATCTTCCCGGACTTCTTGTCGGCGAGCTCGGCTT CTGTCTCGCGCAGCACGGGG
Product: BolA-like protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MGVKDSLTQKLREAFTPESLEVIDESNLHEGHAGHSGRSESHFRVNIVSGAFAGKSRIDRHRMVNELLAAELSGGVHALA LKARAPGEA
Sequences:
>Translated_89_residues MGVKDSLTQKLREAFTPESLEVIDESNLHEGHAGHSGRSESHFRVNIVSGAFAGKSRIDRHRMVNELLAAELSGGVHALA LKARAPGEA >Mature_88_residues GVKDSLTQKLREAFTPESLEVIDESNLHEGHAGHSGRSESHFRVNIVSGAFAGKSRIDRHRMVNELLAAELSGGVHALAL KARAPGEA
Specific function: Plays An Important Role In General Stress Response (Heat Shock, Acidic Stress, Oxidative Stress, Carbon-Starvation Stress And Osmotic Shock). Involved In Morphogenetic Pathway. Has A Role Is The Induction Of The Expression Of Daca (Pbp5), Dacc (Pbp6) And
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bolA/yrbA family [H]
Homologues:
Organism=Homo sapiens, GI7705638, Length=86, Percent_Identity=50, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI87081740, Length=81, Percent_Identity=50.6172839506173, Blast_Score=76, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17541430, Length=77, Percent_Identity=50.6493506493506, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002634 [H]
Pfam domain/function: PF01722 BolA [H]
EC number: NA
Molecular weight: Translated: 9557; Mature: 9426
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVKDSLTQKLREAFTPESLEVIDESNLHEGHAGHSGRSESHFRVNIVSGAFAGKSRIDR CCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHH HRMVNELLAAELSGGVHALALKARAPGEA HHHHHHHHHHHHCCCEEEEEEECCCCCCC >Mature Secondary Structure GVKDSLTQKLREAFTPESLEVIDESNLHEGHAGHSGRSESHFRVNIVSGAFAGKSRIDR CCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHH HRMVNELLAAELSGGVHALALKARAPGEA HHHHHHHHHHHHCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1917840 [H]