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The map label for this gene is yabI [H]

Identifier: 86747666

GI number: 86747666

Start: 604962

End: 605588

Strand: Reverse

Name: yabI [H]

Synonym: RPB_0540

Alternate gene names: 86747666

Gene position: 605588-604962 (Counterclockwise)

Preceding gene: 86747671

Following gene: 86747664

Centisome position: 11.36

GC content: 72.25

Gene sequence:

>627_bases
GTGAACGCCGTTCTCGATGCCCTGATCGCCTTCGCCTCCGCCCATCGCGAGCTGGCCTATCTGACGCTGTTCACGGCCGC
GCTGCTGGAGGCGGTGCCGGTGCTGGGCACATTGGTGCCGGGCTCGACCATCATCCTGGCGCTGAGCGCGCTGATTCCGG
GCGGCCAGCTCGATCTGGTCGGCGTGCTCGCGGCGGCGGCGGCCGGGGCCGCGCTCGGCGACGGCGCCGCCTACTGGATC
GGACATCGCCAGCAGCGGCGCATCCTGTCGGCATGGCCGATGGCGCGCTATCCCGAGCTGGTGGCGCGCGCCGAGGCGTT
CTTCGTGAGATTCGGCGGCTGGGCGGTGTTGTTCGCCCGCTTCGTGCCGCCGATTCGCGCCTTCGTGCCGATCACCGCCG
GCGCGCTGCAGATGCCGCCGGCGCGGTTCTTCGCGATCAACATCCCGGCGATCCTGCTTTGGGCGCCGGCGCATGTGTTG
CCCGGCGTCGTCGCCGCCACCGCGCTGGAGCAGGCGCACGGCCGATGGCATCACTGGCTGCCGGTGGTCGCGGGCGTGGC
CGGCGTGGTCGTTCTAGCTGGCTGGCTGCTGTGGCGGCGACGGCGGGGTAAGGCGCAGGCGACCTGA

Upstream 100 bases:

>100_bases
AGGCCGATCGGGATCGGCTTGCCCGCGGAACGCGCAACGATTCCGCAGGCGCATTGCCGTAGACTGCCGCCACCGCTCCT
TTCGCGCTGCGAGGCCCTGC

Downstream 100 bases:

>100_bases
CGAGCCGGCCGCCGCCGCGGTCAGGTCCGCACCACCGTCTTCAAGTAATTATACGCCTTGATGATCTCGATCAGGCGATC
CTCGGTCGAGCGGTCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MNAVLDALIAFASAHRELAYLTLFTAALLEAVPVLGTLVPGSTIILALSALIPGGQLDLVGVLAAAAAGAALGDGAAYWI
GHRQQRRILSAWPMARYPELVARAEAFFVRFGGWAVLFARFVPPIRAFVPITAGALQMPPARFFAINIPAILLWAPAHVL
PGVVAATALEQAHGRWHHWLPVVAGVAGVVVLAGWLLWRRRRGKAQAT

Sequences:

>Translated_208_residues
MNAVLDALIAFASAHRELAYLTLFTAALLEAVPVLGTLVPGSTIILALSALIPGGQLDLVGVLAAAAAGAALGDGAAYWI
GHRQQRRILSAWPMARYPELVARAEAFFVRFGGWAVLFARFVPPIRAFVPITAGALQMPPARFFAINIPAILLWAPAHVL
PGVVAATALEQAHGRWHHWLPVVAGVAGVVVLAGWLLWRRRRGKAQAT
>Mature_208_residues
MNAVLDALIAFASAHRELAYLTLFTAALLEAVPVLGTLVPGSTIILALSALIPGGQLDLVGVLAAAAAGAALGDGAAYWI
GHRQQRRILSAWPMARYPELVARAEAFFVRFGGWAVLFARFVPPIRAFVPITAGALQMPPARFFAINIPAILLWAPAHVL
PGVVAATALEQAHGRWHHWLPVVAGVAGVVVLAGWLLWRRRRGKAQAT

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1786252, Length=210, Percent_Identity=30.4761904761905, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22110; Mature: 22110

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVLDALIAFASAHRELAYLTLFTAALLEAVPVLGTLVPGSTIILALSALIPGGQLDLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHH
GVLAAAAAGAALGDGAAYWIGHRQQRRILSAWPMARYPELVARAEAFFVRFGGWAVLFAR
HHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHH
FVPPIRAFVPITAGALQMPPARFFAINIPAILLWAPAHVLPGVVAATALEQAHGRWHHWL
HHCHHHHHHHHCCCCCCCCCCCEEEEECCCCEEECCHHHHHHHHHHHHHHHHCCCHHHHH
PVVAGVAGVVVLAGWLLWRRRRGKAQAT
HHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNAVLDALIAFASAHRELAYLTLFTAALLEAVPVLGTLVPGSTIILALSALIPGGQLDLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHH
GVLAAAAAGAALGDGAAYWIGHRQQRRILSAWPMARYPELVARAEAFFVRFGGWAVLFAR
HHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHH
FVPPIRAFVPITAGALQMPPARFFAINIPAILLWAPAHVLPGVVAATALEQAHGRWHHWL
HHCHHHHHHHHCCCCCCCCCCCEEEEECCCCEEECCHHHHHHHHHHHHHHHHCCCHHHHH
PVVAGVAGVVVLAGWLLWRRRRGKAQAT
HHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]