Click here to switch to the map view.

The map label for this gene is 86747582

Identifier: 86747582

GI number: 86747582

Start: 503151

End: 503513

Strand: Reverse

Name: 86747582

Synonym: RPB_0456

Alternate gene names: NA

Gene position: 503513-503151 (Counterclockwise)

Preceding gene: 86747583

Following gene: 86747579

Centisome position: 9.44

GC content: 60.88

Gene sequence:

>363_bases
ATGGCTGACATCATGAGCGTTCTGGCCTCGGGCTATACGGCCGCGGGGCTGCTGAACCCGTCGAAGACGCCCTACGTCAA
TGTCGACGCCAAGCTCTATGAAGGCACCTGGAGCGGCACCTATTCGAACACCAAGAAGTTCGCCATCACGGTGTCGAATG
TGCAGGGCTTTCGCGCCCAGGTGAAATATCAGAGCGAAGGCACCATCAAGTATCAGACCGTGCTGATCAAGGACGGCTCG
TTCCGGATCGGCGACAGCAAGTTCACGCTCGGCAGCAACGGCAGCGCCTCGATCCGCACCGCGATCACCGATCCGGTCAC
CAGCCAGACCAGCCTCATCACCGGCACCGCCAAGCGCGACTGA

Upstream 100 bases:

>100_bases
GCTCGGCTGTACGCGGCCGATCGGACAACCCTTAACGCGGCGTTAACCGGCGCTGGTGTGAAGTGTTGCTGAATATTTTT
CGCGCGGCAGGGAGCTGGCG

Downstream 100 bases:

>100_bases
GCCGCGCGGCATTCCCGTTTCCTTCGTCATGGCCGGGCTCGTCCCGGCCATCCACGTTTTGATCCGTTGCAGGGCCTCAA
GACCGTGGATGCCCGCGACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MADIMSVLASGYTAAGLLNPSKTPYVNVDAKLYEGTWSGTYSNTKKFAITVSNVQGFRAQVKYQSEGTIKYQTVLIKDGS
FRIGDSKFTLGSNGSASIRTAITDPVTSQTSLITGTAKRD

Sequences:

>Translated_120_residues
MADIMSVLASGYTAAGLLNPSKTPYVNVDAKLYEGTWSGTYSNTKKFAITVSNVQGFRAQVKYQSEGTIKYQTVLIKDGS
FRIGDSKFTLGSNGSASIRTAITDPVTSQTSLITGTAKRD
>Mature_119_residues
ADIMSVLASGYTAAGLLNPSKTPYVNVDAKLYEGTWSGTYSNTKKFAITVSNVQGFRAQVKYQSEGTIKYQTVLIKDGSF
RIGDSKFTLGSNGSASIRTAITDPVTSQTSLITGTAKRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12829; Mature: 12697

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADIMSVLASGYTAAGLLNPSKTPYVNVDAKLYEGTWSGTYSNTKKFAITVSNVQGFRAQ
CHHHHHHHHCCCEEEEECCCCCCCEEEECEEEEECCCCCCCCCCEEEEEEEECCCCEEEE
VKYQSEGTIKYQTVLIKDGSFRIGDSKFTLGSNGSASIRTAITDPVTSQTSLITGTAKRD
EEECCCCCEEEEEEEEECCCEEECCCEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCC
>Mature Secondary Structure 
ADIMSVLASGYTAAGLLNPSKTPYVNVDAKLYEGTWSGTYSNTKKFAITVSNVQGFRAQ
HHHHHHHHCCCEEEEECCCCCCCEEEECEEEEECCCCCCCCCCEEEEEEEECCCCEEEE
VKYQSEGTIKYQTVLIKDGSFRIGDSKFTLGSNGSASIRTAITDPVTSQTSLITGTAKRD
EEECCCCCEEEEEEEEECCCEEECCCEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA