| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is blh [H]
Identifier: 86747583
GI number: 86747583
Start: 503622
End: 504548
Strand: Reverse
Name: blh [H]
Synonym: RPB_0457
Alternate gene names: 86747583
Gene position: 504548-503622 (Counterclockwise)
Preceding gene: 86747587
Following gene: 86747582
Centisome position: 9.46
GC content: 68.07
Gene sequence:
>927_bases GTGACCAGCCCTTCTTCGCCGCAGATCCCCTCGCAGGTCTCCTCGCCGCGGATTCGCGCGTTTTTCGACGCGCCGACCAA CACCATCAGCTATCTGGTGTCGGACCCCGCCACCCGCCGCGCCGCGGTGATCGATCCGGTGCTCGACTATGATCACCGCG ACGGTTCCGTCGACGTGCGCTCGGCCGATGCGATCCTGCAGGCCGCCCGGGACGACGGCCTGACGATCGACTGGGTGCTG GAAACCCACGCCCATGCCGACCACCTCTCCGGTGCGCCCTACATCAAGGCCAAGACCGGGGCGCGGATCGGCATCGGCGA GCACATCAAGGATGTGCAGCGGATTTTCCGGCCGATGTTCAACGCCGACGATCTGCGCACCGACGGCAGCGATTTCGATC ATCTGTTCAAGGACGGCGAGCGGTTTTCGATCGGCGATCTGCCGGTCGAGGTGCTGCACACGCCGGGGCACACGCCCGCC GACATCGCCTACCGGATCGGCGACGACGCGGTGTTCGTCGGCGACACGCTGTTCATGCCGGATTACGGCACGGCGCGGGC GGATTTCCCCGGTGGCGACGCGCACCAGCTCTATCGCTCGATCCAGAAGCTGCTGGCGCTGCCGCCGCAGACCCGGCTGT TCATGTGCCACGACTACAAGGCGCCCGGCCGCGACGACTATGCGTGGGAGACCACCGTGCAGGCGCAGCGCGACGGCAAT GTGCATCTGCGCGGCGGCGTCAGCGAGCAGCAATTCGTCGACATGCGCAACGCCCGCGACGCCACGCTGAGCGCGCCGAC GCTGCTGCTGCCGTCGATCCAGGTCAACATCCGCGCCGGCCGCTTCCCCAAGGCGCAGCAGAACGGCGTGCATTATCTGC TGCTGCCGGTGCATGCCCGCCCCGGCGCCGAGGCGGGGCTGAGCTGA
Upstream 100 bases:
>100_bases TCAGCATGAAATTCTACAAATCGGCGCTTGCACGGGTGGGATATGCTAATAGATAGGCTTGGGGCGCAACAGCCATTCTA CCGGATCAGGGAAATTGCTC
Downstream 100 bases:
>100_bases GCCGCCCGGCTCGGCTGTACGCGGCCGATCGGACAACCCTTAACGCGGCGTTAACCGGCGCTGGTGTGAAGTGTTGCTGA ATATTTTTCGCGCGGCAGGG
Product: Beta-lactamase-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MTSPSSPQIPSQVSSPRIRAFFDAPTNTISYLVSDPATRRAAVIDPVLDYDHRDGSVDVRSADAILQAARDDGLTIDWVL ETHAHADHLSGAPYIKAKTGARIGIGEHIKDVQRIFRPMFNADDLRTDGSDFDHLFKDGERFSIGDLPVEVLHTPGHTPA DIAYRIGDDAVFVGDTLFMPDYGTARADFPGGDAHQLYRSIQKLLALPPQTRLFMCHDYKAPGRDDYAWETTVQAQRDGN VHLRGGVSEQQFVDMRNARDATLSAPTLLLPSIQVNIRAGRFPKAQQNGVHYLLLPVHARPGAEAGLS
Sequences:
>Translated_308_residues MTSPSSPQIPSQVSSPRIRAFFDAPTNTISYLVSDPATRRAAVIDPVLDYDHRDGSVDVRSADAILQAARDDGLTIDWVL ETHAHADHLSGAPYIKAKTGARIGIGEHIKDVQRIFRPMFNADDLRTDGSDFDHLFKDGERFSIGDLPVEVLHTPGHTPA DIAYRIGDDAVFVGDTLFMPDYGTARADFPGGDAHQLYRSIQKLLALPPQTRLFMCHDYKAPGRDDYAWETTVQAQRDGN VHLRGGVSEQQFVDMRNARDATLSAPTLLLPSIQVNIRAGRFPKAQQNGVHYLLLPVHARPGAEAGLS >Mature_307_residues TSPSSPQIPSQVSSPRIRAFFDAPTNTISYLVSDPATRRAAVIDPVLDYDHRDGSVDVRSADAILQAARDDGLTIDWVLE THAHADHLSGAPYIKAKTGARIGIGEHIKDVQRIFRPMFNADDLRTDGSDFDHLFKDGERFSIGDLPVEVLHTPGHTPAD IAYRIGDDAVFVGDTLFMPDYGTARADFPGGDAHQLYRSIQKLLALPPQTRLFMCHDYKAPGRDDYAWETTVQAQRDGNV HLRGGVSEQQFVDMRNARDATLSAPTLLLPSIQVNIRAGRFPKAQQNGVHYLLLPVHARPGAEAGLS
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=265, Percent_Identity=26.7924528301887, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI94538322, Length=204, Percent_Identity=28.921568627451, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI94538320, Length=204, Percent_Identity=29.4117647058824, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI46361987, Length=196, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI14150041, Length=196, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=5e-12, Organism=Escherichia coli, GI1787158, Length=184, Percent_Identity=32.6086956521739, Blast_Score=72, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17538952, Length=270, Percent_Identity=27.037037037037, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI221330176, Length=267, Percent_Identity=28.4644194756554, Blast_Score=105, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 33857; Mature: 33726
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPSSPQIPSQVSSPRIRAFFDAPTNTISYLVSDPATRRAAVIDPVLDYDHRDGSVDVR CCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCEEECHHHCCCCCCCCEEEH SADAILQAARDDGLTIDWVLETHAHADHLSGAPYIKAKTGARIGIGEHIKDVQRIFRPMF HHHHHHHHHCCCCCEEEEEEECCCCHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHC NADDLRTDGSDFDHLFKDGERFSIGDLPVEVLHTPGHTPADIAYRIGDDAVFVGDTLFMP CCCCCCCCCCCHHHHHCCCCEEEECCCCEEEEECCCCCCHHEEEEECCCEEEECCEEECC DYGTARADFPGGDAHQLYRSIQKLLALPPQTRLFMCHDYKAPGRDDYAWETTVQAQRDGN CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCC VHLRGGVSEQQFVDMRNARDATLSAPTLLLPSIQVNIRAGRFPKAQQNGVHYLLLPVHAR EEEECCCCHHHHHHHHCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCEEEEEEEECC PGAEAGLS CCCCCCCC >Mature Secondary Structure TSPSSPQIPSQVSSPRIRAFFDAPTNTISYLVSDPATRRAAVIDPVLDYDHRDGSVDVR CCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCEEECHHHCCCCCCCCEEEH SADAILQAARDDGLTIDWVLETHAHADHLSGAPYIKAKTGARIGIGEHIKDVQRIFRPMF HHHHHHHHHCCCCCEEEEEEECCCCHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHC NADDLRTDGSDFDHLFKDGERFSIGDLPVEVLHTPGHTPADIAYRIGDDAVFVGDTLFMP CCCCCCCCCCCHHHHHCCCCEEEECCCCEEEEECCCCCCHHEEEEECCCEEEECCEEECC DYGTARADFPGGDAHQLYRSIQKLLALPPQTRLFMCHDYKAPGRDDYAWETTVQAQRDGN CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCC VHLRGGVSEQQFVDMRNARDATLSAPTLLLPSIQVNIRAGRFPKAQQNGVHYLLLPVHAR EEEECCCCHHHHHHHHCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCEEEEEEEECC PGAEAGLS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]