| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is pfkB [H]
Identifier: 86747570
GI number: 86747570
Start: 490104
End: 491042
Strand: Reverse
Name: pfkB [H]
Synonym: RPB_0444
Alternate gene names: 86747570
Gene position: 491042-490104 (Counterclockwise)
Preceding gene: 86747572
Following gene: 86747569
Centisome position: 9.21
GC content: 70.39
Gene sequence:
>939_bases ATGGTCGAGATCGTGACCCTCACGCCCAATCCCGCCATCGATCTGTCGACCTCGGTCGCCCGCATGGTGCCGAGCCGCAA GCTGCGCTGCGCGGCGCAGCAGCGTGATCCCGGCGGCGGCGGCATCAATGTGGCGCGGGTGGTGAAGCGGTTCGGCGGCG ACGTCGAGGCGATCTATCCGGCCGGCGGCTTCACCGGCCGGCTGCTGCGCGCGCTGCTCGACCGCGAGCAGATCCCGAGC CGCGTCGTCGAGGCGGTGGCCGAGACCCGCGAGGATTTCTCCGTCACGGAATCAGAGACCGGCCAGCAGTTCCGCTTCGT GCTGCCGGGCGAGGCCTTGGCCGAGGGCGAGTGGCGCGGGCTGCTGGAGATTCTCGGCGGGACCGATCCGGCACCGACCA TCGTGGTCGGCTCGGGCAGCCTGCCGCCCGGCGTGCCGCATGATTTCTACGCCCAGGCCGCCGCGGTGGCGAAGCGGATC GGCGCGCAGTTCTTTCTCGACACCTCCGGCGACCAGCTGATCGCCGCGCTCGCTCATGGCGTCACGCTGATCAAACCGAA TCTGCGCGAGATGCAGGAATTGGCCGGCCGGCCGCTCGCCAATGATCAGGACTACGTCGCCGCCGCGCGGCAGCAGATCG ACGCCGGCAAGGTCGAGATCGTCGCGCTGTCGCTCGGCCATCTCGGCGCGCTGCTGGTCACCAAGGACAAGGCGCTGCGT TCGCCGGCGCTGCCGGTCGCGCAGGTCTCCACCGTCGGCGCCGGCGACAGTTTCCTCGGCGCGATCGCCTTCAGCCTGGC CAAGGGGCGGCCGATCGAGGACGCCTTCCGGCTGGCGCTGGCTTCGGGCTCGGCGTCGCTCACCATGCACGGCACCGAAT TGTGCCGGCCGGCCGATGTCGAACGATTGAGCGCCGAGGTGGTGATCCAGCCGCTGTAG
Upstream 100 bases:
>100_bases GCGTGAGACTGCGGCGTCCGCCCGACGTCCCGTCGCGGCAGCCGGCGGTGCCGTCCGCCGGTCCTCATTCCCCGCAAGCC AGAACTGGAGATCGTCGCCG
Downstream 100 bases:
>100_bases CGCGCGCCCGGCGCTCACATTGCGCGGAGCGGCCAAGGCCGCTCCGGAACCGTTGTGGGGACGGCCGGTTGTGTTCCGCG ACGCCGCATTGCGCGTCGCG
Product: PfkB
Products: ADP; D-fructose 1,6-bisphosphate
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MVEIVTLTPNPAIDLSTSVARMVPSRKLRCAAQQRDPGGGGINVARVVKRFGGDVEAIYPAGGFTGRLLRALLDREQIPS RVVEAVAETREDFSVTESETGQQFRFVLPGEALAEGEWRGLLEILGGTDPAPTIVVGSGSLPPGVPHDFYAQAAAVAKRI GAQFFLDTSGDQLIAALAHGVTLIKPNLREMQELAGRPLANDQDYVAAARQQIDAGKVEIVALSLGHLGALLVTKDKALR SPALPVAQVSTVGAGDSFLGAIAFSLAKGRPIEDAFRLALASGSASLTMHGTELCRPADVERLSAEVVIQPL
Sequences:
>Translated_312_residues MVEIVTLTPNPAIDLSTSVARMVPSRKLRCAAQQRDPGGGGINVARVVKRFGGDVEAIYPAGGFTGRLLRALLDREQIPS RVVEAVAETREDFSVTESETGQQFRFVLPGEALAEGEWRGLLEILGGTDPAPTIVVGSGSLPPGVPHDFYAQAAAVAKRI GAQFFLDTSGDQLIAALAHGVTLIKPNLREMQELAGRPLANDQDYVAAARQQIDAGKVEIVALSLGHLGALLVTKDKALR SPALPVAQVSTVGAGDSFLGAIAFSLAKGRPIEDAFRLALASGSASLTMHGTELCRPADVERLSAEVVIQPL >Mature_312_residues MVEIVTLTPNPAIDLSTSVARMVPSRKLRCAAQQRDPGGGGINVARVVKRFGGDVEAIYPAGGFTGRLLRALLDREQIPS RVVEAVAETREDFSVTESETGQQFRFVLPGEALAEGEWRGLLEILGGTDPAPTIVVGSGSLPPGVPHDFYAQAAAVAKRI GAQFFLDTSGDQLIAALAHGVTLIKPNLREMQELAGRPLANDQDYVAAARQQIDAGKVEIVALSLGHLGALLVTKDKALR SPALPVAQVSTVGAGDSFLGAIAFSLAKGRPIEDAFRLALASGSASLTMHGTELCRPADVERLSAEVVIQPL
Specific function: Key control step of glycolysis. [C]
COG id: COG1105
COG function: function code G; Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI1788017, Length=310, Percent_Identity=42.5806451612903, Blast_Score=221, Evalue=4e-59, Organism=Escherichia coli, GI1788493, Length=317, Percent_Identity=29.3375394321767, Blast_Score=92, Evalue=5e-20,
Paralogues:
None
Copy number: 496 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR017583 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: 2.7.1.11
Molecular weight: Translated: 32787; Mature: 32787
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEIVTLTPNPAIDLSTSVARMVPSRKLRCAAQQRDPGGGGINVARVVKRFGGDVEAIYP CEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEC AGGFTGRLLRALLDREQIPSRVVEAVAETREDFSVTESETGQQFRFVLPGEALAEGEWRG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHCCCHHHH LLEILGGTDPAPTIVVGSGSLPPGVPHDFYAQAAAVAKRIGAQFFLDTSGDQLIAALAHG HHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCC VTLIKPNLREMQELAGRPLANDQDYVAAARQQIDAGKVEIVALSLGHLGALLVTKDKALR EEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCHHHC SPALPVAQVSTVGAGDSFLGAIAFSLAKGRPIEDAFRLALASGSASLTMHGTELCRPADV CCCCCHHHEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCHHHCCCCCH ERLSAEVVIQPL HHHCEEEEEECC >Mature Secondary Structure MVEIVTLTPNPAIDLSTSVARMVPSRKLRCAAQQRDPGGGGINVARVVKRFGGDVEAIYP CEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEC AGGFTGRLLRALLDREQIPSRVVEAVAETREDFSVTESETGQQFRFVLPGEALAEGEWRG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHCCCHHHH LLEILGGTDPAPTIVVGSGSLPPGVPHDFYAQAAAVAKRIGAQFFLDTSGDQLIAALAHG HHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCC VTLIKPNLREMQELAGRPLANDQDYVAAARQQIDAGKVEIVALSLGHLGALLVTKDKALR EEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCHHHC SPALPVAQVSTVGAGDSFLGAIAFSLAKGRPIEDAFRLALASGSASLTMHGTELCRPADV CCCCCHHHEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCHHHCCCCCH ERLSAEVVIQPL HHHCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Co2+; Mn2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; D-fructose 6-phosphate
Specific reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate
General reaction: Phospho group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]