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The map label for this gene is comM [H]

Identifier: 86747541

GI number: 86747541

Start: 458905

End: 460443

Strand: Reverse

Name: comM [H]

Synonym: RPB_0415

Alternate gene names: 86747541

Gene position: 460443-458905 (Counterclockwise)

Preceding gene: 86747542

Following gene: 86747540

Centisome position: 8.64

GC content: 71.35

Gene sequence:

>1539_bases
ATGGTTCAGCACGTGTCCACGGTGGCTTTCGAAGGCATCGACGCGCGCGCGGTCGATGTCCAGGTCCAGGTCTCGCCCGG
GCTGCCGGCCTTCGCCGTCGTCGGCCTCGCCGACAAGGCGGTGTCGGAAGCCCGCGAGCGGGTTCGCTCGGCGCTGATCG
CCTCGGGCCTGGCGCTGCCGGCACGACGCATCACGGTCAATCTCGCGCCCGCCGATCTGCCGAAGGAAGGCAGCCATTAC
GACCTGCCGATCGCGCTCGGGCTGATGGCGGCGATCGGCGCCATCCCCGGCGACGCGCTGGCGGGATTCACCGTGCTGGG
CGAACTCGGCCTCGACGGCTCGATCGCGCCGGTGGCCGGCGTGCTGCCGGCCGCGATCGCCGCCAACGCCCGCGACGAGG
GCCTGATCTGCCCGGCGGCCTGCGGCTCCGAGGCGGCCTGGGCGAGCCCCGACATCCAGATCATCGCGGCCCGGTCGCTG
ATCCAGATCGCCAATCATTTCAAAGGGACGCAGCTTCTCAGCCGGCCGCAGCCGCGGGTCCACGAGGCCGAGAGTTCGAC
CCTCGACCTGCGCGACATCAAGGGCCAGGAGAGCGCCAAGCGCGCGCTGGAGATCGCCGCCGCAGGCGGTCACCATCTGC
TGATGGTGGGGTCGCCCGGCGCGGGCAAGTCGATGCTGGCGGCGCGGCTGCCGTCGATCCTGCCGCCACTGTCCCCGGCC
GAATTGCTCGAAGTCTCGATGATCGCCTCGGTCGCCGGCGAGATCCGCGACGGCGCTTTGACGGCGAAGCGCCCGTTCCG
CGCGCCACACCATTCCGCCAGCATGGCGGCGCTGACCGGCGGAGGCATCAAGGCGCGACCCGGTGAGATTTCGCTGGCGC
ATCAGGGCGTGCTGTTCCTGGACGAACTCCCCGAATTCGATCCCCGCGTTCTGGATTCGTTGCGGGCGCCGCTCGAAACC
GGCGAAGTCGCGGTGTCGCGTGCCAACCATCGCGTCACCTACCCGGCCCGGGTCATGTTGGTCGCGGCGATGAACCCGTG
CCGCTGCGGCCGCGCCTACGAACCGGGCTATGCCTGCAAGCGCGGGCGGGTCGAGCGCTGCAGTGCGGACTATCAATCCC
GCATTTCCGGGCCACTGCTGGATCGGATCGACCTGCGGATCGAGGTGCCCGCGGTCACCGCCGCCGATCTGATCCTGCCG
CCTGCGGCGGAAGGCTCCGCCGAAGTGGCGGCGCGGGTTGCCGCCGCGCGCGACGTGCAGCGGCAACGCTATGCCGCGAT
CGGGCTACCGCAATTCCGCACCAATGCCGAGGCGCCGGCCGCCGCGCTGGAAGCCACCGCCCAGCCGGATTCCGCCGGGC
TGAAGCTGCTGCGCGACGCGGCCGAGACCATGCGGCTGTCGGCGCGCGGCTATCATCGCGTCCTCCGCGTCGCCCGCACC
CTCGCCGACCTCGACGGCGCCGACAAGATCGGCCGGCTGCATCTGGCCGAAGCGCTGTCCTATCGCGCGCTGGGAGAGGA
CGTCAGACGCGCCGCCTGA

Upstream 100 bases:

>100_bases
TCGGCATGAGGCTGGGGCCGGTCGCCAAGGAACTTTGTTCTTCTAATGTTCTTGCGACCCCCTGGAAACCGCGTTAACCT
TCGGATCGCAGGGGGACGTC

Downstream 100 bases:

>100_bases
ACCACGCCGCATCATCATGGTGAATCACCCGTCCATCTCGTCAACCTGACGGTAACGAGTTCCGTTTACCATCTGCGAAC
CATAGCCCTGCGTATCGGGG

Product: Mg chelatase-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MVQHVSTVAFEGIDARAVDVQVQVSPGLPAFAVVGLADKAVSEARERVRSALIASGLALPARRITVNLAPADLPKEGSHY
DLPIALGLMAAIGAIPGDALAGFTVLGELGLDGSIAPVAGVLPAAIAANARDEGLICPAACGSEAAWASPDIQIIAARSL
IQIANHFKGTQLLSRPQPRVHEAESSTLDLRDIKGQESAKRALEIAAAGGHHLLMVGSPGAGKSMLAARLPSILPPLSPA
ELLEVSMIASVAGEIRDGALTAKRPFRAPHHSASMAALTGGGIKARPGEISLAHQGVLFLDELPEFDPRVLDSLRAPLET
GEVAVSRANHRVTYPARVMLVAAMNPCRCGRAYEPGYACKRGRVERCSADYQSRISGPLLDRIDLRIEVPAVTAADLILP
PAAEGSAEVAARVAAARDVQRQRYAAIGLPQFRTNAEAPAAALEATAQPDSAGLKLLRDAAETMRLSARGYHRVLRVART
LADLDGADKIGRLHLAEALSYRALGEDVRRAA

Sequences:

>Translated_512_residues
MVQHVSTVAFEGIDARAVDVQVQVSPGLPAFAVVGLADKAVSEARERVRSALIASGLALPARRITVNLAPADLPKEGSHY
DLPIALGLMAAIGAIPGDALAGFTVLGELGLDGSIAPVAGVLPAAIAANARDEGLICPAACGSEAAWASPDIQIIAARSL
IQIANHFKGTQLLSRPQPRVHEAESSTLDLRDIKGQESAKRALEIAAAGGHHLLMVGSPGAGKSMLAARLPSILPPLSPA
ELLEVSMIASVAGEIRDGALTAKRPFRAPHHSASMAALTGGGIKARPGEISLAHQGVLFLDELPEFDPRVLDSLRAPLET
GEVAVSRANHRVTYPARVMLVAAMNPCRCGRAYEPGYACKRGRVERCSADYQSRISGPLLDRIDLRIEVPAVTAADLILP
PAAEGSAEVAARVAAARDVQRQRYAAIGLPQFRTNAEAPAAALEATAQPDSAGLKLLRDAAETMRLSARGYHRVLRVART
LADLDGADKIGRLHLAEALSYRALGEDVRRAA
>Mature_512_residues
MVQHVSTVAFEGIDARAVDVQVQVSPGLPAFAVVGLADKAVSEARERVRSALIASGLALPARRITVNLAPADLPKEGSHY
DLPIALGLMAAIGAIPGDALAGFTVLGELGLDGSIAPVAGVLPAAIAANARDEGLICPAACGSEAAWASPDIQIIAARSL
IQIANHFKGTQLLSRPQPRVHEAESSTLDLRDIKGQESAKRALEIAAAGGHHLLMVGSPGAGKSMLAARLPSILPPLSPA
ELLEVSMIASVAGEIRDGALTAKRPFRAPHHSASMAALTGGGIKARPGEISLAHQGVLFLDELPEFDPRVLDSLRAPLET
GEVAVSRANHRVTYPARVMLVAAMNPCRCGRAYEPGYACKRGRVERCSADYQSRISGPLLDRIDLRIEVPAVTAADLILP
PAAEGSAEVAARVAAARDVQRQRYAAIGLPQFRTNAEAPAAALEATAQPDSAGLKLLRDAAETMRLSARGYHRVLRVART
LADLDGADKIGRLHLAEALSYRALGEDVRRAA

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=513, Percent_Identity=42.6900584795322, Blast_Score=368, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 53541; Mature: 53541

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQHVSTVAFEGIDARAVDVQVQVSPGLPAFAVVGLADKAVSEARERVRSALIASGLALP
CCCCCCHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ARRITVNLAPADLPKEGSHYDLPIALGLMAAIGAIPGDALAGFTVLGELGLDGSIAPVAG
CEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHH
VLPAAIAANARDEGLICPAACGSEAAWASPDIQIIAARSLIQIANHFKGTQLLSRPQPRV
HHHHHHHCCCCCCCCEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHCCCCCCC
HEAESSTLDLRDIKGQESAKRALEIAAAGGHHLLMVGSPGAGKSMLAARLPSILPPLSPA
CCCCCCCEEHHHCCCHHHHHHHHHHEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHH
ELLEVSMIASVAGEIRDGALTAKRPFRAPHHSASMAALTGGGIKARPGEISLAHQGVLFL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCEEEE
DELPEFDPRVLDSLRAPLETGEVAVSRANHRVTYPARVMLVAAMNPCRCGRAYEPGYACK
CCCCCCCHHHHHHHHCCCCCCCCCEECCCCEEECHHHEEEEEECCCHHCCCCCCCCCHHC
RGRVERCSADYQSRISGPLLDRIDLRIEVPAVTAADLILPPAAEGSAEVAARVAAARDVQ
CCCHHHHCCCHHHHCCCCCHHCEEEEEECCCEEEHHEECCCCCCCHHHHHHHHHHHHHHH
RQRYAAIGLPQFRTNAEAPAAALEATAQPDSAGLKLLRDAAETMRLSARGYHRVLRVART
HHHHHHCCCCHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LADLDGADKIGRLHLAEALSYRALGEDVRRAA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVQHVSTVAFEGIDARAVDVQVQVSPGLPAFAVVGLADKAVSEARERVRSALIASGLALP
CCCCCCHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ARRITVNLAPADLPKEGSHYDLPIALGLMAAIGAIPGDALAGFTVLGELGLDGSIAPVAG
CEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHH
VLPAAIAANARDEGLICPAACGSEAAWASPDIQIIAARSLIQIANHFKGTQLLSRPQPRV
HHHHHHHCCCCCCCCEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHCCCCCCC
HEAESSTLDLRDIKGQESAKRALEIAAAGGHHLLMVGSPGAGKSMLAARLPSILPPLSPA
CCCCCCCEEHHHCCCHHHHHHHHHHEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHH
ELLEVSMIASVAGEIRDGALTAKRPFRAPHHSASMAALTGGGIKARPGEISLAHQGVLFL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCEEEE
DELPEFDPRVLDSLRAPLETGEVAVSRANHRVTYPARVMLVAAMNPCRCGRAYEPGYACK
CCCCCCCHHHHHHHHCCCCCCCCCEECCCCEEECHHHEEEEEECCCHHCCCCCCCCCHHC
RGRVERCSADYQSRISGPLLDRIDLRIEVPAVTAADLILPPAAEGSAEVAARVAAARDVQ
CCCHHHHCCCHHHHCCCCCHHCEEEEEECCCEEEHHEECCCCCCCHHHHHHHHHHHHHHH
RQRYAAIGLPQFRTNAEAPAAALEATAQPDSAGLKLLRDAAETMRLSARGYHRVLRVART
HHHHHHCCCCHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LADLDGADKIGRLHLAEALSYRALGEDVRRAA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]