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The map label for this gene is 86747540

Identifier: 86747540

GI number: 86747540

Start: 458298

End: 458783

Strand: Reverse

Name: 86747540

Synonym: RPB_0414

Alternate gene names: NA

Gene position: 458783-458298 (Counterclockwise)

Preceding gene: 86747541

Following gene: 86747539

Centisome position: 8.6

GC content: 68.11

Gene sequence:

>486_bases
ATGTTGCGTATCCGAGTTCTGGCCTCCGCCGTTCCGCTCCTCGTCGTGGGTTTGCTTGCCCGCGGCGAGCTGATCGCCGG
CCCGCCGCCCTGCATTGCCGTGGGCGATCGGTCGGTGCAGATCGCACCCGCGCTGGGGCGCGCCCAAATCCATGTCGGCT
TCACCGATGATCCGGCGCGTGCCACGGTGCGGGTCCAGATCGTCGACAGTCCCGATGCCGCCGATTTCGCCGTCACCGAC
GACGTCGTCACCGACGAACCCGGCGGCTGCGTGTCGGCGCCCGAATCGAGATTGGTGGCGATCACCACCAATCCGGCGGC
GACCGATGCGGTGATCTACCTCACCCACGACGACGATGGCAGGATCGACTACCGGATCTTCGTGCGGGCCAACAGCTTCA
CCGCGCGCGAGGCGGCCGCACTTCTGGTCGCCTCCTCCAGCCGCCACGCACCGATCGCCACCGCCTCGATCGGCAGCCGG
TCTTAA

Upstream 100 bases:

>100_bases
GAATCACCCGTCCATCTCGTCAACCTGACGGTAACGAGTTCCGTTTACCATCTGCGAACCATAGCCCTGCGTATCGGGGC
TGGCGTTGCGGGTGGATGTG

Downstream 100 bases:

>100_bases
GGTTCGGTCAACCCTGTCGGCAGAGCGCATCGCAACCATCGCGCGCTTCAAGCTGTTTGCAATGTCGAGTGCCGATGCTG
GCGACTCCGGCATGGTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MLRIRVLASAVPLLVVGLLARGELIAGPPPCIAVGDRSVQIAPALGRAQIHVGFTDDPARATVRVQIVDSPDAADFAVTD
DVVTDEPGGCVSAPESRLVAITTNPAATDAVIYLTHDDDGRIDYRIFVRANSFTAREAAALLVASSSRHAPIATASIGSR
S

Sequences:

>Translated_161_residues
MLRIRVLASAVPLLVVGLLARGELIAGPPPCIAVGDRSVQIAPALGRAQIHVGFTDDPARATVRVQIVDSPDAADFAVTD
DVVTDEPGGCVSAPESRLVAITTNPAATDAVIYLTHDDDGRIDYRIFVRANSFTAREAAALLVASSSRHAPIATASIGSR
S
>Mature_161_residues
MLRIRVLASAVPLLVVGLLARGELIAGPPPCIAVGDRSVQIAPALGRAQIHVGFTDDPARATVRVQIVDSPDAADFAVTD
DVVTDEPGGCVSAPESRLVAITTNPAATDAVIYLTHDDDGRIDYRIFVRANSFTAREAAALLVASSSRHAPIATASIGSR
S

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16723; Mature: 16723

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRIRVLASAVPLLVVGLLARGELIAGPPPCIAVGDRSVQIAPALGRAQIHVGFTDDPAR
CEEEEEHHHHHHHHHHHHHHCCCEECCCCCEEEECCCEEEEECCCCEEEEEEECCCCCCC
ATVRVQIVDSPDAADFAVTDDVVTDEPGGCVSAPESRLVAITTNPAATDAVIYLTHDDDG
EEEEEEEECCCCCCCEEEECCEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCC
RIDYRIFVRANSFTAREAAALLVASSSRHAPIATASIGSRS
CEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCC
>Mature Secondary Structure
MLRIRVLASAVPLLVVGLLARGELIAGPPPCIAVGDRSVQIAPALGRAQIHVGFTDDPAR
CEEEEEHHHHHHHHHHHHHHCCCEECCCCCEEEECCCEEEEECCCCEEEEEEECCCCCCC
ATVRVQIVDSPDAADFAVTDDVVTDEPGGCVSAPESRLVAITTNPAATDAVIYLTHDDDG
EEEEEEEECCCCCCCEEEECCEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCC
RIDYRIFVRANSFTAREAAALLVASSSRHAPIATASIGSRS
CEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA