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The map label for this gene is cyoA [H]

Identifier: 86747368

GI number: 86747368

Start: 275434

End: 276591

Strand: Reverse

Name: cyoA [H]

Synonym: RPB_0242

Alternate gene names: 86747368

Gene position: 276591-275434 (Counterclockwise)

Preceding gene: 86747371

Following gene: 86747367

Centisome position: 5.19

GC content: 64.42

Gene sequence:

>1158_bases
TTGTCACGTCTCAAAATCCTGGCGCTGCTACCCCTGGCGGTATTGTTGAGTGGCTGCAACTTCGTAGTGATGGCGCCGGC
CGGCGACATTGCGGTGCAGCAGCGCGATCTGATCGTGATTTCGACGGTGTTGATGCTGCTGATCGTTCTGCCGGTGATGG
CGCTGACGGTGTGGTTCGCCTGGCGCTATCGCCACTCCAACGACGCGGCGAAATACGATCCCGACTGGGACCATTCGACC
GGCCTCGAACTGGTGATCTGGTCGGCGCCGCTGGCGATCATCATCTGCCTGGGCGCGATCACCTGGATGGGCACGCATCT
GCTCGATCCTTATCGCTCGCTCGACCGCATCGCCCATGACCGGCCGATCGATCGTGCCAAGGCGCCGCTCGAGGTCGATG
TCGTCGCACTCGATTGGAAATGGCTGTTCATCTATCCGGAATACGGCATCGCTTCGCTCAACGAGCTCGCCGCACCGGTC
GATCGGCCGATCAGCTTCCGCATCACGGCGTCCTCGGTGATGAATTCGTTCTACATCCCGGCGCTCGCCGGGATGATCTA
TGCGATGCCCGGCATGGAGACCAAGCTCCACGCGGTGGTCAATCATGCCGGCACCTACAAGGGCTTCTCGGCGAACTACA
GCGGCGCCGGGTTCTCCGGCATGCGATTCGATTTCCACGGTCTCGACGACGCCGGATTTGAGCAGTGGGTCGCCAAGACC
AAGGCGAGCTCCGATACGCTCGGACGCACCGAGTATCTGGCGCTGGAAAAGCCGAGCGCCAACGAGCCCGCCCGTGGCTT
CGGCACGGTCGACGCCGACCTGTATCGCGCCATTCTCAACATGTGCGTCGAGCCCGGAAAGATGTGCATGAGCGAGATGA
TGGCGATCGACGCCCGCGGCGGCAACGGCATGGCCGGCCTGCGCAACACGCTGCCGCTCGCTTACGACAAATACGCCCGC
CGCGGCACCGCACTCGGTCCGGAGCCGAGCTTCGTGGCCGGCACCTGCACGATCGACGAGCCGCAGGGCCGCGTCACCGC
GCAGGTCCGGGACAGTTCGCCGCTGCTCGGCGCCGGGTTGAAGCGTCCGCCGCTGTTCACGCCGCTCGGGTCGTCCACCT
CGCTGCTGTTCGCCCCGGCGTCGAAATCCGAGTCCTGA

Upstream 100 bases:

>100_bases
CCCGCACCGCAACATTGGACAAATTGTCCAATGTCCCGATTGCTGCGTCGCAGCTAGGCCCTCGCCTTGCGAGGCATTCT
CATTCTCAAAGGGCGGAACG

Downstream 100 bases:

>100_bases
GGGATCGCATGCTTACCAATCCTGATATCGTCAAGGCGATCTTCGGCCGGCTGTCTCTGGAATCGCTGCCGTTGCACGAG
CCGATCGTCGTCCTCACCTT

Product: ubiquinol oxidase, subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MSRLKILALLPLAVLLSGCNFVVMAPAGDIAVQQRDLIVISTVLMLLIVLPVMALTVWFAWRYRHSNDAAKYDPDWDHST
GLELVIWSAPLAIIICLGAITWMGTHLLDPYRSLDRIAHDRPIDRAKAPLEVDVVALDWKWLFIYPEYGIASLNELAAPV
DRPISFRITASSVMNSFYIPALAGMIYAMPGMETKLHAVVNHAGTYKGFSANYSGAGFSGMRFDFHGLDDAGFEQWVAKT
KASSDTLGRTEYLALEKPSANEPARGFGTVDADLYRAILNMCVEPGKMCMSEMMAIDARGGNGMAGLRNTLPLAYDKYAR
RGTALGPEPSFVAGTCTIDEPQGRVTAQVRDSSPLLGAGLKRPPLFTPLGSSTSLLFAPASKSES

Sequences:

>Translated_385_residues
MSRLKILALLPLAVLLSGCNFVVMAPAGDIAVQQRDLIVISTVLMLLIVLPVMALTVWFAWRYRHSNDAAKYDPDWDHST
GLELVIWSAPLAIIICLGAITWMGTHLLDPYRSLDRIAHDRPIDRAKAPLEVDVVALDWKWLFIYPEYGIASLNELAAPV
DRPISFRITASSVMNSFYIPALAGMIYAMPGMETKLHAVVNHAGTYKGFSANYSGAGFSGMRFDFHGLDDAGFEQWVAKT
KASSDTLGRTEYLALEKPSANEPARGFGTVDADLYRAILNMCVEPGKMCMSEMMAIDARGGNGMAGLRNTLPLAYDKYAR
RGTALGPEPSFVAGTCTIDEPQGRVTAQVRDSSPLLGAGLKRPPLFTPLGSSTSLLFAPASKSES
>Mature_384_residues
SRLKILALLPLAVLLSGCNFVVMAPAGDIAVQQRDLIVISTVLMLLIVLPVMALTVWFAWRYRHSNDAAKYDPDWDHSTG
LELVIWSAPLAIIICLGAITWMGTHLLDPYRSLDRIAHDRPIDRAKAPLEVDVVALDWKWLFIYPEYGIASLNELAAPVD
RPISFRITASSVMNSFYIPALAGMIYAMPGMETKLHAVVNHAGTYKGFSANYSGAGFSGMRFDFHGLDDAGFEQWVAKTK
ASSDTLGRTEYLALEKPSANEPARGFGTVDADLYRAILNMCVEPGKMCMSEMMAIDARGGNGMAGLRNTLPLAYDKYARR
GTALGPEPSFVAGTCTIDEPQGRVTAQVRDSSPLLGAGLKRPPLFTPLGSSTSLLFAPASKSES

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=305, Percent_Identity=44.5901639344262, Blast_Score=267, Evalue=7e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 41851; Mature: 41720

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLKILALLPLAVLLSGCNFVVMAPAGDIAVQQRDLIVISTVLMLLIVLPVMALTVWFA
CCCHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
WRYRHSNDAAKYDPDWDHSTGLELVIWSAPLAIIICLGAITWMGTHLLDPYRSLDRIAHD
HHEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RPIDRAKAPLEVDVVALDWKWLFIYPEYGIASLNELAAPVDRPISFRITASSVMNSFYIP
CCCCCCCCCCEEEEEEEEEEEEEEECCCCCHHHHHHHCCCCCCEEEEEEHHHHHHHHHHH
ALAGMIYAMPGMETKLHAVVNHAGTYKGFSANYSGAGFSGMRFDFHGLDDAGFEQWVAKT
HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHH
KASSDTLGRTEYLALEKPSANEPARGFGTVDADLYRAILNMCVEPGKMCMSEMMAIDARG
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHEEECCC
GNGMAGLRNTLPLAYDKYARRGTALGPEPSFVAGTCTIDEPQGRVTAQVRDSSPLLGAGL
CCCCCCHHHCCCHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCC
KRPPLFTPLGSSTSLLFAPASKSES
CCCCCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
SRLKILALLPLAVLLSGCNFVVMAPAGDIAVQQRDLIVISTVLMLLIVLPVMALTVWFA
CCHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
WRYRHSNDAAKYDPDWDHSTGLELVIWSAPLAIIICLGAITWMGTHLLDPYRSLDRIAHD
HHEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RPIDRAKAPLEVDVVALDWKWLFIYPEYGIASLNELAAPVDRPISFRITASSVMNSFYIP
CCCCCCCCCCEEEEEEEEEEEEEEECCCCCHHHHHHHCCCCCCEEEEEEHHHHHHHHHHH
ALAGMIYAMPGMETKLHAVVNHAGTYKGFSANYSGAGFSGMRFDFHGLDDAGFEQWVAKT
HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHH
KASSDTLGRTEYLALEKPSANEPARGFGTVDADLYRAILNMCVEPGKMCMSEMMAIDARG
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHEEECCC
GNGMAGLRNTLPLAYDKYARRGTALGPEPSFVAGTCTIDEPQGRVTAQVRDSSPLLGAGL
CCCCCCHHHCCCHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCC
KRPPLFTPLGSSTSLLFAPASKSES
CCCCCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9868765 [H]