Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is crcB3 [H]
Identifier: 86747328
GI number: 86747328
Start: 225447
End: 225845
Strand: Reverse
Name: crcB3 [H]
Synonym: RPB_0202
Alternate gene names: 86747328
Gene position: 225845-225447 (Counterclockwise)
Preceding gene: 86747337
Following gene: 86747327
Centisome position: 4.24
GC content: 62.91
Gene sequence:
>399_bases ATGCTCGATACCTGCCTTCTTGTCGGTCTGGGCGGAGCCGTCGGCGGCGCCTCTCGCTTCGTGGTCTCGGATATCGTGGG GCAGAGGTGGGGGACGACGTTCCCGTGGGGCACGCTCGTCGTCAATGTCACCGGCGCCCTGCTCATCGGCATCGTGGTCG GCCTGGCTCGCATCGACGCCGGCGCATTCAACAGCCCGAGACTGCACGATCTGATCATCACGGGATTGCTGGGCGGATAC ACTACGGTCTCTTCGTTCAGTCTTCAGACCGTCAATCTTGTTCTGGATCGGCGAGCCGGGCTTGCGACGCTGAATGTCGT CGCATCGACCACATTGTGTCTGACCGCGGTCGCGTTCGGCTATTTCGGCACCATCTGGGCCGCTCGCCATGGCGCTTGA
Upstream 100 bases:
>100_bases GATTTCGCAAGACCGGCGCGGATCGGCGGTCCAATTGCGTCATCGACCCCCGATGAGACCGCGATTCCGCAATGACAGAT ATTTGGAGATACGGACCGTG
Downstream 100 bases:
>100_bases GCAACCCATGCCGACGTCACGGATCGTCCTCTGCACCGCCGTGGCACTCGGAAGCGCGGTCGGCGCTCTGTCTCGCTTCG GCTCGGCGTCTATCATCGCG
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MLDTCLLVGLGGAVGGASRFVVSDIVGQRWGTTFPWGTLVVNVTGALLIGIVVGLARIDAGAFNSPRLHDLIITGLLGGY TTVSSFSLQTVNLVLDRRAGLATLNVVASTTLCLTAVAFGYFGTIWAARHGA
Sequences:
>Translated_132_residues MLDTCLLVGLGGAVGGASRFVVSDIVGQRWGTTFPWGTLVVNVTGALLIGIVVGLARIDAGAFNSPRLHDLIITGLLGGY TTVSSFSLQTVNLVLDRRAGLATLNVVASTTLCLTAVAFGYFGTIWAARHGA >Mature_132_residues MLDTCLLVGLGGAVGGASRFVVSDIVGQRWGTTFPWGTLVVNVTGALLIGIVVGLARIDAGAFNSPRLHDLIITGLLGGY TTVSSFSLQTVNLVLDRRAGLATLNVVASTTLCLTAVAFGYFGTIWAARHGA
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 13606; Mature: 13606
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDTCLLVGLGGAVGGASRFVVSDIVGQRWGTTFPWGTLVVNVTGALLIGIVVGLARIDA CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GAFNSPRLHDLIITGLLGGYTTVSSFSLQTVNLVLDRRAGLATLNVVASTTLCLTAVAFG CCCCCCCHHHHHHHHHHCCHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH YFGTIWAARHGA HHHHHHHHCCCC >Mature Secondary Structure MLDTCLLVGLGGAVGGASRFVVSDIVGQRWGTTFPWGTLVVNVTGALLIGIVVGLARIDA CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GAFNSPRLHDLIITGLLGGYTTVSSFSLQTVNLVLDRRAGLATLNVVASTTLCLTAVAFG CCCCCCCHHHHHHHHHHCCHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH YFGTIWAARHGA HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12271122 [H]