Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is crcB3 [H]
Identifier: 86747327
GI number: 86747327
Start: 224996
End: 225457
Strand: Reverse
Name: crcB3 [H]
Synonym: RPB_0201
Alternate gene names: 86747327
Gene position: 225457-224996 (Counterclockwise)
Preceding gene: 86747328
Following gene: 86747326
Centisome position: 4.23
GC content: 61.69
Gene sequence:
>462_bases ATGGCGCTTGAGCAACCCATGCCGACGTCACGGATCGTCCTCTGCACCGCCGTGGCACTCGGAAGCGCGGTCGGCGCTCT GTCTCGCTTCGGCTCGGCGTCTATCATCGCGGATCTGTGGGGCGCTGGCGATCTGGTCGCAACCGCGTTCGTCAACATCG TCGGGTCATTCGTCATTGCATTGTATGCGACGCTCACGGCGACGCGCGGGGCTTTTCCGATGAGCGAGAGCTCTCGTCAG TTCGTGATGGCGGGCTTTTGCGGCGGGTACACGACGCGGTCACTGATGGGGTTGGATACATTCATGATCATTCTCGACCA TCATGCATTCTACGGCGTCGCCTATGTGACCGGCGTCGTCGCCATGTCGCTGCTCGCCGCCGCCTCCGGATATGGACTCG GTCGAATGTTCGATCCGCGCAGCGACTCCAGAACCATGGAAGAATGCCGCGCGCTGTCATAG
Upstream 100 bases:
>100_bases CGGCGAGCCGGGCTTGCGACGCTGAATGTCGTCGCATCGACCACATTGTGTCTGACCGCGGTCGCGTTCGGCTATTTCGG CACCATCTGGGCCGCTCGCC
Downstream 100 bases:
>100_bases CGCTCGCTGGTGAAATGCGTGCTCGGCGACCGTCGTTTTCGCAAAGGACGCCGCCTCGACGCCGATCCGGTTCCGCCGAT CGTTCGAAAGCAGAACGCGT
Product: camphor resistance CrcB protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MALEQPMPTSRIVLCTAVALGSAVGALSRFGSASIIADLWGAGDLVATAFVNIVGSFVIALYATLTATRGAFPMSESSRQ FVMAGFCGGYTTRSLMGLDTFMIILDHHAFYGVAYVTGVVAMSLLAAASGYGLGRMFDPRSDSRTMEECRALS
Sequences:
>Translated_153_residues MALEQPMPTSRIVLCTAVALGSAVGALSRFGSASIIADLWGAGDLVATAFVNIVGSFVIALYATLTATRGAFPMSESSRQ FVMAGFCGGYTTRSLMGLDTFMIILDHHAFYGVAYVTGVVAMSLLAAASGYGLGRMFDPRSDSRTMEECRALS >Mature_152_residues ALEQPMPTSRIVLCTAVALGSAVGALSRFGSASIIADLWGAGDLVATAFVNIVGSFVIALYATLTATRGAFPMSESSRQF VMAGFCGGYTTRSLMGLDTFMIILDHHAFYGVAYVTGVVAMSLLAAASGYGLGRMFDPRSDSRTMEECRALS
Specific function: Unknown
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 16055; Mature: 15924
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALEQPMPTSRIVLCTAVALGSAVGALSRFGSASIIADLWGAGDLVATAFVNIVGSFVIA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH LYATLTATRGAFPMSESSRQFVMAGFCGGYTTRSLMGLDTFMIILDHHAFYGVAYVTGVV HHHHHHHHCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMSLLAAASGYGLGRMFDPRSDSRTMEECRALS HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure ALEQPMPTSRIVLCTAVALGSAVGALSRFGSASIIADLWGAGDLVATAFVNIVGSFVIA CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH LYATLTATRGAFPMSESSRQFVMAGFCGGYTTRSLMGLDTFMIILDHHAFYGVAYVTGVV HHHHHHHHCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMSLLAAASGYGLGRMFDPRSDSRTMEECRALS HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA