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The map label for this gene is 86747325

Identifier: 86747325

GI number: 86747325

Start: 222746

End: 223471

Strand: Reverse

Name: 86747325

Synonym: RPB_0199

Alternate gene names: NA

Gene position: 223471-222746 (Counterclockwise)

Preceding gene: 86747326

Following gene: 86747324

Centisome position: 4.19

GC content: 62.4

Gene sequence:

>726_bases
ATGCGGGTCGACGACACCGACGGTCATGTCCCCGCGCTCGGGATCCGATCACAGTCGCGGTCGGAGCTGCACCTCGCCCT
CGCGCTTCTGATGACCTCCGTGGCTGGATTCCTCGACGCCGTCGGGTTCACGCACCTGGCAGGTCTGTACGTTTCGTTCA
TGAGTGGAAATAGTACGCGTCTTGGAATTGCCATCGCTCAGGGCGATCGGCAGATCTTTCTCCCTGTCGCCCTGGTCATC
TTCAGCTTTGTATTTGGCGCCTTCCTCGGCACCCTCATCAGCGAGATCGTCGAGCGGTTCAAATGCGCCGCGATCCTCGC
TATCGAGATCGGACTGTTGGTATCGGCGATCGTGCTGACCCGCTATGTCGAGGGCTATCTCGGCCTTCTGCCGGTCTGTG
CTGCGATGGGCATGCAGAACGCAGCCCACGAGACCGTCGCTGGCGTGGAGATCGGCAAGAGCTTCGTCACCGGGTTTCTG
TTCGGTCTCGGAAAAGCGCTGGCGCAGCTCGTTCATGGCGGTGGGAGCCGGCCCCAAGCACTCGTCTATGGGGCCAGTTG
GGTCAGCTTTCTGGGCGGTGTCACCTTGGGATGCCTGGCGCTCGCGCAGTTCGGGCTTTCGATCGCACTGTGCACCGCCT
GCACAGTGCTGGCTGGGCTCGCGATTGGAGCTGTCCTCGATCAGCGACGACCACTTGAGCCAGCCCCCCGTTCGTTGCCC
GGATAG

Upstream 100 bases:

>100_bases
GCTTGTTGTCCGTCCATTCGAGAACCGCGAATGCACTGGGCAGCGAAAACCGCCTCGCTTCTTGACTTGCGTGACAGACG
GAACGGAGCAAGTGATCGCC

Downstream 100 bases:

>100_bases
ACGGCGACTGCCGCTCACCGTTGCTCCGCAAACAGGACCGCGCAACGCGCGGGATCATCTCGGTGACATCGACCACAACC
GACGCGTCGATATCCCGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MRVDDTDGHVPALGIRSQSRSELHLALALLMTSVAGFLDAVGFTHLAGLYVSFMSGNSTRLGIAIAQGDRQIFLPVALVI
FSFVFGAFLGTLISEIVERFKCAAILAIEIGLLVSAIVLTRYVEGYLGLLPVCAAMGMQNAAHETVAGVEIGKSFVTGFL
FGLGKALAQLVHGGGSRPQALVYGASWVSFLGGVTLGCLALAQFGLSIALCTACTVLAGLAIGAVLDQRRPLEPAPRSLP
G

Sequences:

>Translated_241_residues
MRVDDTDGHVPALGIRSQSRSELHLALALLMTSVAGFLDAVGFTHLAGLYVSFMSGNSTRLGIAIAQGDRQIFLPVALVI
FSFVFGAFLGTLISEIVERFKCAAILAIEIGLLVSAIVLTRYVEGYLGLLPVCAAMGMQNAAHETVAGVEIGKSFVTGFL
FGLGKALAQLVHGGGSRPQALVYGASWVSFLGGVTLGCLALAQFGLSIALCTACTVLAGLAIGAVLDQRRPLEPAPRSLP
G
>Mature_241_residues
MRVDDTDGHVPALGIRSQSRSELHLALALLMTSVAGFLDAVGFTHLAGLYVSFMSGNSTRLGIAIAQGDRQIFLPVALVI
FSFVFGAFLGTLISEIVERFKCAAILAIEIGLLVSAIVLTRYVEGYLGLLPVCAAMGMQNAAHETVAGVEIGKSFVTGFL
FGLGKALAQLVHGGGSRPQALVYGASWVSFLGGVTLGCLALAQFGLSIALCTACTVLAGLAIGAVLDQRRPLEPAPRSLP
G

Specific function: Unknown

COG id: COG3619

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0700 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010699 [H]

Pfam domain/function: PF06912 DUF1275 [H]

EC number: NA

Molecular weight: Translated: 25004; Mature: 25004

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVDDTDGHVPALGIRSQSRSELHLALALLMTSVAGFLDAVGFTHLAGLYVSFMSGNSTR
CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LGIAIAQGDRQIFLPVALVIFSFVFGAFLGTLISEIVERFKCAAILAIEIGLLVSAIVLT
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYVEGYLGLLPVCAAMGMQNAAHETVAGVEIGKSFVTGFLFGLGKALAQLVHGGGSRPQA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LVYGASWVSFLGGVTLGCLALAQFGLSIALCTACTVLAGLAIGAVLDQRRPLEPAPRSLP
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
G
C
>Mature Secondary Structure
MRVDDTDGHVPALGIRSQSRSELHLALALLMTSVAGFLDAVGFTHLAGLYVSFMSGNSTR
CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LGIAIAQGDRQIFLPVALVIFSFVFGAFLGTLISEIVERFKCAAILAIEIGLLVSAIVLT
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYVEGYLGLLPVCAAMGMQNAAHETVAGVEIGKSFVTGFLFGLGKALAQLVHGGGSRPQA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LVYGASWVSFLGGVTLGCLALAQFGLSIALCTACTVLAGLAIGAVLDQRRPLEPAPRSLP
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9659380; 11481432 [H]