Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86747324
Identifier: 86747324
GI number: 86747324
Start: 222420
End: 222725
Strand: Reverse
Name: 86747324
Synonym: RPB_0198
Alternate gene names: NA
Gene position: 222725-222420 (Counterclockwise)
Preceding gene: 86747325
Following gene: 86747323
Centisome position: 4.18
GC content: 62.75
Gene sequence:
>306_bases TTGCTCCGCAAACAGGACCGCGCAACGCGCGGGATCATCTCGGTGACATCGACCACAACCGACGCGTCGATATCCCGACG ATCACCAGCCGTACTTCGGCTCCCCGAAACAGCCGCCCTGCTGCCCGCCGGGCTGCCGCGTTCGGTCATCGTGGTGTCGA CCATAGTGCCCGTCTTGTCTGCTTCGTCGTTGATTTGGACGTTCGCCGCATGGCGTCCTGATCAGGTCACGTCGTCCGCC GCGATCGCCGACAAACGCTACGAGGTGGCCGCCTGCTACGGCATTTGTTCTCTGCCCTCGTCATAA
Upstream 100 bases:
>100_bases TGCTGGCTGGGCTCGCGATTGGAGCTGTCCTCGATCAGCGACGACCACTTGAGCCAGCCCCCCGTTCGTTGCCCGGATAG ACGGCGACTGCCGCTCACCG
Downstream 100 bases:
>100_bases CACCTAGATTTAATGTTCAGCCGAAATTCATCTCTCTACATTTGTTCGCAGAGTTCAGCATCGGCATTGGAGCCCACCCA TGACCTCGGCATTTTCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MLRKQDRATRGIISVTSTTTDASISRRSPAVLRLPETAALLPAGLPRSVIVVSTIVPVLSASSLIWTFAAWRPDQVTSSA AIADKRYEVAACYGICSLPSS
Sequences:
>Translated_101_residues MLRKQDRATRGIISVTSTTTDASISRRSPAVLRLPETAALLPAGLPRSVIVVSTIVPVLSASSLIWTFAAWRPDQVTSSA AIADKRYEVAACYGICSLPSS >Mature_101_residues MLRKQDRATRGIISVTSTTTDASISRRSPAVLRLPETAALLPAGLPRSVIVVSTIVPVLSASSLIWTFAAWRPDQVTSSA AIADKRYEVAACYGICSLPSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10716; Mature: 10716
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKQDRATRGIISVTSTTTDASISRRSPAVLRLPETAALLPAGLPRSVIVVSTIVPVLS CCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHC ASSLIWTFAAWRPDQVTSSAAIADKRYEVAACYGICSLPSS CCHHEEEHCCCCCCCCCCCHHHCCCCEEEEEEEEEECCCCC >Mature Secondary Structure MLRKQDRATRGIISVTSTTTDASISRRSPAVLRLPETAALLPAGLPRSVIVVSTIVPVLS CCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHC ASSLIWTFAAWRPDQVTSSAAIADKRYEVAACYGICSLPSS CCHHEEEHCCCCCCCCCCCHHHCCCCEEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA