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The map label for this gene is ctaC [H]

Identifier: 86747283

GI number: 86747283

Start: 169624

End: 170322

Strand: Reverse

Name: ctaC [H]

Synonym: RPB_0156

Alternate gene names: 86747283

Gene position: 170322-169624 (Counterclockwise)

Preceding gene: 86747285

Following gene: 86747282

Centisome position: 3.19

GC content: 70.67

Gene sequence:

>699_bases
ATGCGCCGATGCCGCGCTTGGTTCACCGCCGGCATCGTCGCGGCGTCGGGATTGCCGCTGGCCGGCTGCGGGGGGCCGCT
GTCGACGCTCGATCCGGCCGGTCCCGCGGCCTCGGCGATCGCTGAGCTGTGGTGGGTGATGCTGATCGGCGCAACCGCGC
TGTTCATGCTGGTGATGGGGTTGCTGTGGTGGGCCTTCGTGCGGCGCGGCGACGGCACGACCTCGCCGAAGCTCTGGCTC
GTCGGCGGCGGGCTGTTGCTGCCGGCGCTGGTGCTGACGCCGCTGCTCGGCTACGGGCTGCTGACCGGCGAGCGGCTGCT
CGCGCATCCCGCGGCCGACGCGCTGCGGGTCGATGTCGAGGCGAAGCAGTGGCAGTGGACGTTCCGCTATCCCGGGCAGG
GCGGCGGGCGGTTCTCGGTCAATGAATTGCACATCCCGGCCGGCCGGCCGGTCGACCTGCGCGTCAGCAGCGCCGATGTG
ATCCACAGCTTCTGGATCCCGCGGCTCGGCGGCAAGATCGATGCGATTCCGGGCCACGTCAATCTGATCCGGCTCTCCGC
CGCGCAGCCGGGGATGTATCGCGGCGTCTGCGCCGAATTCTGCGGCACCGGCCACACCATCATGGATTTCAGCGTCGAGG
CGCTCGAGGCGGATGCCTTCGCCGATCGGCTGCGCGCGCTGCCACAGGACAAGCGATGA

Upstream 100 bases:

>100_bases
CGTGGATCGGATGGCCGGCGAGGGCCACGATCGAATTGGTGTCGTAAGCGCGGACTTCTTCGAGAATCGTCTTCGGCATC
TTGCACCTCGCCCCGACCTA

Downstream 100 bases:

>100_bases
CGAACCAGCGTCCGGACGCATCCGCAGCGGCGGCGAGCCCGATCCGCCTGCACAAGCAGCTCGAGGCGGTGTGGGGCACG
CCGGGCGGCTGGGGCCGGCT

Product: cytochrome c oxidase, subunit II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MRRCRAWFTAGIVAASGLPLAGCGGPLSTLDPAGPAASAIAELWWVMLIGATALFMLVMGLLWWAFVRRGDGTTSPKLWL
VGGGLLLPALVLTPLLGYGLLTGERLLAHPAADALRVDVEAKQWQWTFRYPGQGGGRFSVNELHIPAGRPVDLRVSSADV
IHSFWIPRLGGKIDAIPGHVNLIRLSAAQPGMYRGVCAEFCGTGHTIMDFSVEALEADAFADRLRALPQDKR

Sequences:

>Translated_232_residues
MRRCRAWFTAGIVAASGLPLAGCGGPLSTLDPAGPAASAIAELWWVMLIGATALFMLVMGLLWWAFVRRGDGTTSPKLWL
VGGGLLLPALVLTPLLGYGLLTGERLLAHPAADALRVDVEAKQWQWTFRYPGQGGGRFSVNELHIPAGRPVDLRVSSADV
IHSFWIPRLGGKIDAIPGHVNLIRLSAAQPGMYRGVCAEFCGTGHTIMDFSVEALEADAFADRLRALPQDKR
>Mature_232_residues
MRRCRAWFTAGIVAASGLPLAGCGGPLSTLDPAGPAASAIAELWWVMLIGATALFMLVMGLLWWAFVRRGDGTTSPKLWL
VGGGLLLPALVLTPLLGYGLLTGERLLAHPAADALRVDVEAKQWQWTFRYPGQGGGRFSVNELHIPAGRPVDLRVSSADV
IHSFWIPRLGGKIDAIPGHVNLIRLSAAQPGMYRGVCAEFCGTGHTIMDFSVEALEADAFADRLRALPQDKR

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI251831110, Length=126, Percent_Identity=31.7460317460317, Blast_Score=82, Evalue=6e-16,
Organism=Escherichia coli, GI1786635, Length=205, Percent_Identity=32.1951219512195, Blast_Score=90, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6226540, Length=231, Percent_Identity=24.2424242424242, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM; PF00034 Cytochrom_C [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 24908; Mature: 24908

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS00078 COX2 ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRCRAWFTAGIVAASGLPLAGCGGPLSTLDPAGPAASAIAELWWVMLIGATALFMLVMG
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LLWWAFVRRGDGTTSPKLWLVGGGLLLPALVLTPLLGYGLLTGERLLAHPAADALRVDVE
HHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEE
AKQWQWTFRYPGQGGGRFSVNELHIPAGRPVDLRVSSADVIHSFWIPRLGGKIDAIPGHV
CCEEEEEEECCCCCCCEEEEEEEECCCCCCEEEEECHHHHHHHHHHHHCCCEEECCCCCE
NLIRLSAAQPGMYRGVCAEFCGTGHTIMDFSVEALEADAFADRLRALPQDKR
EEEEEECCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRRCRAWFTAGIVAASGLPLAGCGGPLSTLDPAGPAASAIAELWWVMLIGATALFMLVMG
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LLWWAFVRRGDGTTSPKLWLVGGGLLLPALVLTPLLGYGLLTGERLLAHPAADALRVDVE
HHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEE
AKQWQWTFRYPGQGGGRFSVNELHIPAGRPVDLRVSSADVIHSFWIPRLGGKIDAIPGHV
CCEEEEEEECCCCCCCEEEEEEEECCCCCCEEEEECHHHHHHHHHHHHCCCEEECCCCCE
NLIRLSAAQPGMYRGVCAEFCGTGHTIMDFSVEALEADAFADRLRALPQDKR
EEEEEECCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7678007 [H]