| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is phhB
Identifier: 86747226
GI number: 86747226
Start: 106532
End: 106837
Strand: Reverse
Name: phhB
Synonym: RPB_0099
Alternate gene names: NA
Gene position: 106837-106532 (Counterclockwise)
Preceding gene: 86747228
Following gene: 86747225
Centisome position: 2.0
GC content: 66.67
Gene sequence:
>306_bases ATGGTCGAGCGGCTGACGGGCAGGGAGCGACAGCAGGCATTGCAGAGCATCGCCGGCTGGCGCGAGGTCGAGGGCCGCGA TGCAATCGCGCGCAGCTTCGTGTTCACGGATTTCAACGAGGCGTTCGGCTTCATGACCCGCGTCGCGCTGGTCGCCGAGA AGGCCGACCATCACCCGGAATGGCGCAACGTCTACAAGACCGTCGAGGTGGTGCTGACGACGCACGACGCCGGTGGCGTC ACCCGCCGCGACATCGATCTGGCGGCGGCGATGAATGCGATCGCGGGTCAATTCGGCGTCGCGTGA
Upstream 100 bases:
>100_bases ATATGGTGAATCGGCGCTGGCGACGCATTGGGCCCGCGCTTTGTGGCCGAGTTGGCGCAGACGGTGCCCCGGCGATAAAT TTGACGTGAGGAGAGCGAGC
Downstream 100 bases:
>100_bases GGTTCCGCCCAGGTTGCGGCGGGACGTCCTCATCACCAGATGAAAGGGCAAGAACGATTGCATTTCCGCACGCGCGGAGG AGACGCGATGACCACCGAAC
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MVERLTGRERQQALQSIAGWREVEGRDAIARSFVFTDFNEAFGFMTRVALVAEKADHHPEWRNVYKTVEVVLTTHDAGGV TRRDIDLAAAMNAIAGQFGVA
Sequences:
>Translated_101_residues MVERLTGRERQQALQSIAGWREVEGRDAIARSFVFTDFNEAFGFMTRVALVAEKADHHPEWRNVYKTVEVVLTTHDAGGV TRRDIDLAAAMNAIAGQFGVA >Mature_101_residues MVERLTGRERQQALQSIAGWREVEGRDAIARSFVFTDFNEAFGFMTRVALVAEKADHHPEWRNVYKTVEVVLTTHDAGGV TRRDIDLAAAMNAIAGQFGVA
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family
Homologues:
Organism=Homo sapiens, GI4557831, Length=94, Percent_Identity=56.3829787234042, Blast_Score=115, Evalue=6e-27, Organism=Homo sapiens, GI134133240, Length=87, Percent_Identity=56.3218390804598, Blast_Score=110, Evalue=2e-25, Organism=Caenorhabditis elegans, GI115533705, Length=95, Percent_Identity=55.7894736842105, Blast_Score=115, Evalue=3e-27, Organism=Drosophila melanogaster, GI45549100, Length=98, Percent_Identity=54.0816326530612, Blast_Score=113, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHS_RHOP2 (Q2J3Z9)
Other databases:
- EMBL: CP000250 - RefSeq: YP_483722.1 - ProteinModelPortal: Q2J3Z9 - SMR: Q2J3Z9 - STRING: Q2J3Z9 - GeneID: 3909685 - GenomeReviews: CP000250_GR - KEGG: rpb:RPB_0099 - eggNOG: COG2154 - HOGENOM: HBG705804 - OMA: SEERKTR - ProtClustDB: PRK00823 - BioCyc: RPAL316058:RPB_0099-MONOMER - HAMAP: MF_00434 - InterPro: IPR001533 - Gene3D: G3DSA:3.30.1360.20 - PANTHER: PTHR12599
Pfam domain/function: PF01329 Pterin_4a; SSF55248 Trans_pterinDh
EC number: =4.2.1.96
Molecular weight: Translated: 11249; Mature: 11249
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVERLTGRERQQALQSIAGWREVEGRDAIARSFVFTDFNEAFGFMTRVALVAEKADHHPE CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHH WRNVYKTVEVVLTTHDAGGVTRRDIDLAAAMNAIAGQFGVA HHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVERLTGRERQQALQSIAGWREVEGRDAIARSFVFTDFNEAFGFMTRVALVAEKADHHPE CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHH WRNVYKTVEVVLTTHDAGGVTRRDIDLAAAMNAIAGQFGVA HHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA