| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is phoA [H]
Identifier: 86747216
GI number: 86747216
Start: 94763
End: 96517
Strand: Reverse
Name: phoA [H]
Synonym: RPB_0089
Alternate gene names: 86747216
Gene position: 96517-94763 (Counterclockwise)
Preceding gene: 162138526
Following gene: 86747213
Centisome position: 1.81
GC content: 67.98
Gene sequence:
>1755_bases ATGATGCGTTTCGCCACGACCTTTTTTGCCTTGCTGGTGTCGACTTCGTTCGCCGCGGCGCAGACGATCTATCCGATCGA CCGCGCCGAAATTCTGGCCGGCGCCCGGTTCGATCTCAAGGTCGAATTCGCCGGCGAAGTCTCCGCCGACAAGGCGACGC TGACCGTCAACGGCACGGATGCCGCAGCGGTGTTCGGCAAGGCTCCGGAGCTGATCGCGCGCGAGGACGGCCGACCGCAA TCGGCGCTGCTGCTGCGCGACGTCGCGCTCGACAAACCCGGCGCCTACACGGTCGAGGCCGGCGACGGCGCGGACCGCCG CAGCGTCGGCTGGACGGTGTACGACACTGGGCCGCGCAAGGCCAAGAACGTCATCCTGTTCATCGGCGACGGGCTGTCGC CCGCGCATCGCGTCGCTGCGCGATTGCTGTCGAAGGGCATCAAGGAAGGCCGCGCCGGCGGCAAGCTGGCGATCGACGAC ATGCCGCAGATGGCGCTGGTGTCGACCGCCGGCAGCGATTCGATCATCACCGATTCCGCCAATGCGGCGAGCGCCTACGC CACCGGCCACAAGGCCGCGGTCAATGCGATGGGCGTCTATGCCGACCGCACCGCGAGCCCGCTCGACGATCCCAGGGTCG AGACGCTGGCGTCGCTGGCGAAGCGGCGGCTGGGACTTGCGATCGGCATCGTCACCAATACCGAGGTGGAAGACGCCACG CCCGCGGCGGTGATCGCCCATACCCGCCGTCGCGCCGCGTATGACGACATCGTCGCGCAGTTCTTTGCCGCAAGTCCCGA CGTGCTGATGGGCGGCGGCGCCGCGTATTTCCTGCCGAAGAGCGCGCAGGGCAAGCGCAAGGACGACGTCGACTATCTGG CGAAGTTCCGCGACGCCGGCTACGCGGTCGCCACCAGTGCGACCGAGCTGGCCGCGGCCGGCAAGCCCGACACGCGAAAA CTGCTCGGCCTGTTCGCGCCCGGCAACATGGACGGCGTGCTCGATCGCCGCTTCCTGAAAGGCGGCGGCGTCGCGAAGAA TCCGGATCAGCCCGATCTGACCGAGCAGGTCGCGGTCGCGCTCGACGTCCTGTCGAAGAACGAGGCCGGCTTCTTCTTGA TGGTCGAATCCGGGATGATCGACAAATACGCCCACGCGCTCGACATGGAGCGCGCGGTCTACGACACCATCATGCTCGAC AATGCGGTGCGGCAAACGCGCGACTGGGCCAAGGCACGCGGCGACGACACGCTGATCCTGGTGGTCGCCGATCACAACCA TCCCAACGCGCTGGTCGGCACCGTGCGCGACGATCTCGCCGAGGGCGAGGACGTGCCGCTGCGCGAACGCATCGGCGTGT ATCAGAGAGCCGGCTTTCCGAACTACCCGGCGCCCGACAAGGACGGCTATCCGGATCGCGTCGACGTCAGTCGCCGCCTG GCGATCTTCTCGGCCAGCCTGCCCGATCACTACGAGACGCTGCGGCCGAAGCTCGACGGCCCGAACCAGCCGACCGAGGC CGGCGACAAGCCCGGCACCTTCAAGGCCAACGAGAAGTACAAGGCCGTGCCGGGGGCGGTTTTGCGGCTCGGCAATCTGC CGGCGATGATGAACGCCAGCGTGCATTCCGGCGAGGACGTGATCCTCACCGCGGCGGGGCCGGGCAGCGACCGGGTCCAC GGCGCGATGGAAAACACCGACGTGTTCCGGGTCATGGCCGAGGCGCTCGGGCTCGCGGCGGCCTCGGCGAAATAG
Upstream 100 bases:
>100_bases GATCAGGCGCGCGTCCCGGAATGACTGCCGCTGCTAAACACCGTCATCGAACCGTCATTTGCCGCTCATACGGTCCGCGC TCCGATTTGGAGCCGTTCCC
Downstream 100 bases:
>100_bases AGCGTTTTCGAGCGAAGTGGAAACCGGTTCGCGTGAAGAAAACGCGTCAAAACAAGAATCTGGAGTACCGATTCTGATTC TATCAGAACCGGAATTGCTC
Product: alkaline phosphatase
Products: NA
Alternate protein names: High molecular weight phosphatase; H-AP [H]
Number of amino acids: Translated: 584; Mature: 584
Protein sequence:
>584_residues MMRFATTFFALLVSTSFAAAQTIYPIDRAEILAGARFDLKVEFAGEVSADKATLTVNGTDAAAVFGKAPELIAREDGRPQ SALLLRDVALDKPGAYTVEAGDGADRRSVGWTVYDTGPRKAKNVILFIGDGLSPAHRVAARLLSKGIKEGRAGGKLAIDD MPQMALVSTAGSDSIITDSANAASAYATGHKAAVNAMGVYADRTASPLDDPRVETLASLAKRRLGLAIGIVTNTEVEDAT PAAVIAHTRRRAAYDDIVAQFFAASPDVLMGGGAAYFLPKSAQGKRKDDVDYLAKFRDAGYAVATSATELAAAGKPDTRK LLGLFAPGNMDGVLDRRFLKGGGVAKNPDQPDLTEQVAVALDVLSKNEAGFFLMVESGMIDKYAHALDMERAVYDTIMLD NAVRQTRDWAKARGDDTLILVVADHNHPNALVGTVRDDLAEGEDVPLRERIGVYQRAGFPNYPAPDKDGYPDRVDVSRRL AIFSASLPDHYETLRPKLDGPNQPTEAGDKPGTFKANEKYKAVPGAVLRLGNLPAMMNASVHSGEDVILTAAGPGSDRVH GAMENTDVFRVMAEALGLAAASAK
Sequences:
>Translated_584_residues MMRFATTFFALLVSTSFAAAQTIYPIDRAEILAGARFDLKVEFAGEVSADKATLTVNGTDAAAVFGKAPELIAREDGRPQ SALLLRDVALDKPGAYTVEAGDGADRRSVGWTVYDTGPRKAKNVILFIGDGLSPAHRVAARLLSKGIKEGRAGGKLAIDD MPQMALVSTAGSDSIITDSANAASAYATGHKAAVNAMGVYADRTASPLDDPRVETLASLAKRRLGLAIGIVTNTEVEDAT PAAVIAHTRRRAAYDDIVAQFFAASPDVLMGGGAAYFLPKSAQGKRKDDVDYLAKFRDAGYAVATSATELAAAGKPDTRK LLGLFAPGNMDGVLDRRFLKGGGVAKNPDQPDLTEQVAVALDVLSKNEAGFFLMVESGMIDKYAHALDMERAVYDTIMLD NAVRQTRDWAKARGDDTLILVVADHNHPNALVGTVRDDLAEGEDVPLRERIGVYQRAGFPNYPAPDKDGYPDRVDVSRRL AIFSASLPDHYETLRPKLDGPNQPTEAGDKPGTFKANEKYKAVPGAVLRLGNLPAMMNASVHSGEDVILTAAGPGSDRVH GAMENTDVFRVMAEALGLAAASAK >Mature_584_residues MMRFATTFFALLVSTSFAAAQTIYPIDRAEILAGARFDLKVEFAGEVSADKATLTVNGTDAAAVFGKAPELIAREDGRPQ SALLLRDVALDKPGAYTVEAGDGADRRSVGWTVYDTGPRKAKNVILFIGDGLSPAHRVAARLLSKGIKEGRAGGKLAIDD MPQMALVSTAGSDSIITDSANAASAYATGHKAAVNAMGVYADRTASPLDDPRVETLASLAKRRLGLAIGIVTNTEVEDAT PAAVIAHTRRRAAYDDIVAQFFAASPDVLMGGGAAYFLPKSAQGKRKDDVDYLAKFRDAGYAVATSATELAAAGKPDTRK LLGLFAPGNMDGVLDRRFLKGGGVAKNPDQPDLTEQVAVALDVLSKNEAGFFLMVESGMIDKYAHALDMERAVYDTIMLD NAVRQTRDWAKARGDDTLILVVADHNHPNALVGTVRDDLAEGEDVPLRERIGVYQRAGFPNYPAPDKDGYPDRVDVSRRL AIFSASLPDHYETLRPKLDGPNQPTEAGDKPGTFKANEKYKAVPGAVLRLGNLPAMMNASVHSGEDVILTAAGPGSDRVH GAMENTDVFRVMAEALGLAAASAK
Specific function: Has only a phosphomonoesterase activity [H]
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Secreted. Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI116734717, Length=500, Percent_Identity=29.8, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI157266292, Length=502, Percent_Identity=30.2788844621514, Blast_Score=146, Evalue=6e-35, Organism=Homo sapiens, GI157266296, Length=341, Percent_Identity=33.7243401759531, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI94721246, Length=342, Percent_Identity=33.9181286549708, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI294660770, Length=495, Percent_Identity=29.0909090909091, Blast_Score=139, Evalue=1e-32, Organism=Homo sapiens, GI294660772, Length=458, Percent_Identity=28.1659388646288, Blast_Score=120, Evalue=3e-27, Organism=Escherichia coli, GI48994877, Length=356, Percent_Identity=33.1460674157303, Blast_Score=144, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6320689, Length=339, Percent_Identity=30.0884955752212, Blast_Score=110, Evalue=8e-25, Organism=Drosophila melanogaster, GI21355981, Length=488, Percent_Identity=28.2786885245902, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI21355151, Length=497, Percent_Identity=28.9738430583501, Blast_Score=132, Evalue=5e-31, Organism=Drosophila melanogaster, GI85725200, Length=348, Percent_Identity=32.7586206896552, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI85815833, Length=348, Percent_Identity=32.7586206896552, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI21358067, Length=429, Percent_Identity=30.5361305361305, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI24585213, Length=358, Percent_Identity=32.4022346368715, Blast_Score=131, Evalue=2e-30, Organism=Drosophila melanogaster, GI24657827, Length=352, Percent_Identity=31.5340909090909, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI24657842, Length=493, Percent_Identity=28.1947261663286, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24657835, Length=493, Percent_Identity=27.5862068965517, Blast_Score=127, Evalue=3e-29, Organism=Drosophila melanogaster, GI18859923, Length=476, Percent_Identity=28.5714285714286, Blast_Score=123, Evalue=5e-28, Organism=Drosophila melanogaster, GI21355149, Length=348, Percent_Identity=31.3218390804598, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI19921912, Length=497, Percent_Identity=27.5653923541247, Blast_Score=115, Evalue=6e-26, Organism=Drosophila melanogaster, GI24651554, Length=510, Percent_Identity=25.2941176470588, Blast_Score=106, Evalue=5e-23,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 61946; Mature: 61946
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRFATTFFALLVSTSFAAAQTIYPIDRAEILAGARFDLKVEFAGEVSADKATLTVNGTD CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEEECCCCCCCCEEEEECCCC AAAVFGKAPELIAREDGRPQSALLLRDVALDKPGAYTVEAGDGADRRSVGWTVYDTGPRK HHHHHCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCCC AKNVILFIGDGLSPAHRVAARLLSKGIKEGRAGGKLAIDDMPQMALVSTAGSDSIITDSA CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCEEECCC NAASAYATGHKAAVNAMGVYADRTASPLDDPRVETLASLAKRRLGLAIGIVTNTEVEDAT CCCHHHHCCCHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCC PAAVIAHTRRRAAYDDIVAQFFAASPDVLMGGGAAYFLPKSAQGKRKDDVDYLAKFRDAG CHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCCCCCHHHHHHHHCCC YAVATSATELAAAGKPDTRKLLGLFAPGNMDGVLDRRFLKGGGVAKNPDQPDLTEQVAVA EEEECCHHHHHHCCCCCHHHHEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHH LDVLSKNEAGFFLMVESGMIDKYAHALDMERAVYDTIMLDNAVRQTRDWAKARGDDTLIL HHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE VVADHNHPNALVGTVRDDLAEGEDVPLRERIGVYQRAGFPNYPAPDKDGYPDRVDVSRRL EEECCCCCCCEEEHHHHHHCCCCCCCHHHHHCHHHHCCCCCCCCCCCCCCCCCCCHHHEE AIFSASLPDHYETLRPKLDGPNQPTEAGDKPGTFKANEKYKAVPGAVLRLGNLPAMMNAS EEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHCCC VHSGEDVILTAAGPGSDRVHGAMENTDVFRVMAEALGLAAASAK CCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHCCCC >Mature Secondary Structure MMRFATTFFALLVSTSFAAAQTIYPIDRAEILAGARFDLKVEFAGEVSADKATLTVNGTD CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEEECCCCCCCCEEEEECCCC AAAVFGKAPELIAREDGRPQSALLLRDVALDKPGAYTVEAGDGADRRSVGWTVYDTGPRK HHHHHCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCCC AKNVILFIGDGLSPAHRVAARLLSKGIKEGRAGGKLAIDDMPQMALVSTAGSDSIITDSA CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCEEECCC NAASAYATGHKAAVNAMGVYADRTASPLDDPRVETLASLAKRRLGLAIGIVTNTEVEDAT CCCHHHHCCCHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCC PAAVIAHTRRRAAYDDIVAQFFAASPDVLMGGGAAYFLPKSAQGKRKDDVDYLAKFRDAG CHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCCCCCHHHHHHHHCCC YAVATSATELAAAGKPDTRKLLGLFAPGNMDGVLDRRFLKGGGVAKNPDQPDLTEQVAVA EEEECCHHHHHHCCCCCHHHHEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHH LDVLSKNEAGFFLMVESGMIDKYAHALDMERAVYDTIMLDNAVRQTRDWAKARGDDTLIL HHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE VVADHNHPNALVGTVRDDLAEGEDVPLRERIGVYQRAGFPNYPAPDKDGYPDRVDVSRRL EEECCCCCCCEEEHHHHHHCCCCCCCHHHHHCHHHHCCCCCCCCCCCCCCCCCCCHHHEE AIFSASLPDHYETLRPKLDGPNQPTEAGDKPGTFKANEKYKAVPGAVLRLGNLPAMMNAS EEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHCCC VHSGEDVILTAAGPGSDRVHGAMENTDVFRVMAEALGLAAASAK CCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043; 8454193 [H]