| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is argG [H]
Identifier: 162138526
GI number: 162138526
Start: 96815
End: 98152
Strand: Reverse
Name: argG [H]
Synonym: RPB_0090
Alternate gene names: 162138526
Gene position: 98152-96815 (Counterclockwise)
Preceding gene: 86747218
Following gene: 86747216
Centisome position: 1.84
GC content: 65.1
Gene sequence:
>1338_bases ATGAGTACGATTCTGAAAAGCCTGCCCAAAGGCGAAAACGTCGGCATCGCGTTTTCGGGCGGGCTCGACACCAGCGCGGC GCTGCTGTGGATGAAGCAGAAGGGCGCTCGCGTGTTCGCCTATACGGCGAATCTCGGCCAGCCCGACGAGGCCGACTACG ACGAGATCCCGCGCAAGGCGATGGAGTTTGGCGCCGAGAAGGCCCGGCTGGTCGATTGTCGGTCGCAGCTCGTGCACGAG GGCATCGCCGCGATCCAGTCGGGCGCCTTCCACGTCTCGACCGGCGGCATCGCCTATTTCAACACCACGCCGCTCGGCCG CGCCGTCACCGGCACCATGCTGGTCTCGGCGATGAAGGAGGACGGCGTCAATATCTGGGGCGACGGCTCGACCTACAAGG GCAACGATATCGAGCGGTTCTATCGCTACGGGCTGCTGACCAACCCGGACCTGCGGATCTACAAGCCCTGGCTCGATCAG CAGTTCATCGACGAGCTCGGCGGCCGCGCCGAAATGTCGGCGTTCATGACCGCCGCCGGCTTCGCCTACAAGATGAGTTC GGAAAAGGCGTATTCGACCGACAGCAACCTGCTCGGCGCCACCCACGAGGCCAAGGATCTCGAACACCTCGATTCAGGCA TCAGGATCGTCGTCCCGATCATGGGCGTGCCGTTCTGGCGCGAGGATTGCGCTGTCAAGGCCGAGACCGTCTCGGTGCGG TTCGAGGAAGGCCAGCCGGTCGCGCTGAACGGCAAGACGTTCGCCGATCCGGTCGCGCTGTTCCTCGAGGCCAATGCGAT CGGCGGCCGGCACGGGCTCGGCATGAGCGACCAGATCGAGAACCGCATCATCGAGGCCAAGAGCCGCGGCATCTACGAGG CGCCGGGCATGGCGCTGCTGCACATCGCCTATGAGCGTCTCGTCACCGGCATCCACAACGAAGACACCATCGAGCAGTAT CGCATCAGCGGCATGAAGCTCGGCCGCCTGCTGTATCAGGGTCGCTGGTTCGACTCGCAGGCCTTGATGCTGCGCGAGAC GGCGCAGCGCTGGGTGGCGCGCGCCATCACCGGCGAGGTCACGCTCGAGCTGCGCCGCGGCAACGACTACTCGATCCTCA ACACGCAGAGCCCGAATCTGACCTATGCGCCGGAGCGGCTCAGCATGGAGAAGGTCGAGGACGCGCCGTTCACGCCGGGC GATCGCATCGGCCAGCTGACGATGCGCAACCTCGATATCGCCGACACCCGCGCCAAGCTGGACATCTTCGCCAAGGCCGG CCTGCTGTCGGCCGGCGAGGGCTCGCACATCCCGAAGCTCGAAAACGACAAGGGCTGA
Upstream 100 bases:
>100_bases GCCTTCGACAGACCCGCCCCGATTAAACGCGTGCCCGCCGCCGCGAAGTTTGATATTCGCGCTCCCGACCCGCAAACCGC CCCAGCCGATTGGAAGTCCC
Downstream 100 bases:
>100_bases GGCGGCCCACCTTCAACGTCATTCCGGGGCGCACGCAGCGAAGCTGCGGGCGAACCCGGAATCCCGAAGTTCAGGGCACC TCGCGGTCGGACGCAGAACA
Product: argininosuccinate synthase
Products: NA
Alternate protein names: Citrulline--aspartate ligase [H]
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MSTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGARVFAYTANLGQPDEADYDEIPRKAMEFGAEKARLVDCRSQLVHE GIAAIQSGAFHVSTGGIAYFNTTPLGRAVTGTMLVSAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNPDLRIYKPWLDQ QFIDELGGRAEMSAFMTAAGFAYKMSSEKAYSTDSNLLGATHEAKDLEHLDSGIRIVVPIMGVPFWREDCAVKAETVSVR FEEGQPVALNGKTFADPVALFLEANAIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQY RISGMKLGRLLYQGRWFDSQALMLRETAQRWVARAITGEVTLELRRGNDYSILNTQSPNLTYAPERLSMEKVEDAPFTPG DRIGQLTMRNLDIADTRAKLDIFAKAGLLSAGEGSHIPKLENDKG
Sequences:
>Translated_445_residues MSTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGARVFAYTANLGQPDEADYDEIPRKAMEFGAEKARLVDCRSQLVHE GIAAIQSGAFHVSTGGIAYFNTTPLGRAVTGTMLVSAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNPDLRIYKPWLDQ QFIDELGGRAEMSAFMTAAGFAYKMSSEKAYSTDSNLLGATHEAKDLEHLDSGIRIVVPIMGVPFWREDCAVKAETVSVR FEEGQPVALNGKTFADPVALFLEANAIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQY RISGMKLGRLLYQGRWFDSQALMLRETAQRWVARAITGEVTLELRRGNDYSILNTQSPNLTYAPERLSMEKVEDAPFTPG DRIGQLTMRNLDIADTRAKLDIFAKAGLLSAGEGSHIPKLENDKG >Mature_444_residues STILKSLPKGENVGIAFSGGLDTSAALLWMKQKGARVFAYTANLGQPDEADYDEIPRKAMEFGAEKARLVDCRSQLVHEG IAAIQSGAFHVSTGGIAYFNTTPLGRAVTGTMLVSAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNPDLRIYKPWLDQQ FIDELGGRAEMSAFMTAAGFAYKMSSEKAYSTDSNLLGATHEAKDLEHLDSGIRIVVPIMGVPFWREDCAVKAETVSVRF EEGQPVALNGKTFADPVALFLEANAIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYR ISGMKLGRLLYQGRWFDSQALMLRETAQRWVARAITGEVTLELRRGNDYSILNTQSPNLTYAPERLSMEKVEDAPFTPGD RIGQLTMRNLDIADTRAKLDIFAKAGLLSAGEGSHIPKLENDKG
Specific function: Arginine biosynthesis; seventh step. [C]
COG id: COG0137
COG function: function code E; Argininosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the argininosuccinate synthase family. Type 2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI53759107, Length=411, Percent_Identity=29.683698296837, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI16950633, Length=411, Percent_Identity=29.683698296837, Blast_Score=156, Evalue=3e-38, Organism=Escherichia coli, GI1789563, Length=442, Percent_Identity=78.7330316742081, Blast_Score=723, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6324514, Length=417, Percent_Identity=29.2565947242206, Blast_Score=157, Evalue=4e-39, Organism=Drosophila melanogaster, GI21358151, Length=391, Percent_Identity=28.6445012787724, Blast_Score=159, Evalue=5e-39,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001518 - InterPro: IPR018223 - InterPro: IPR014729 [H]
Pfam domain/function: PF00764 Arginosuc_synth [H]
EC number: =6.3.4.5 [H]
Molecular weight: Translated: 48960; Mature: 48829
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS00564 ARGININOSUCCIN_SYN_1 ; PS00565 ARGININOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGARVFAYTANLGQPDEADYDEIPRKA CCCHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHH MEFGAEKARLVDCRSQLVHEGIAAIQSGAFHVSTGGIAYFNTTPLGRAVTGTMLVSAMKE HHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHH DGVNIWGDGSTYKGNDIERFYRYGLLTNPDLRIYKPWLDQQFIDELGGRAEMSAFMTAAG CCCEEECCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHCCHHHHHHHHHHHC FAYKMSSEKAYSTDSNLLGATHEAKDLEHLDSGIRIVVPIMGVPFWREDCAVKAETVSVR EEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEEE FEEGQPVALNGKTFADPVALFLEANAIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALL ECCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH HIAYERLVTGIHNEDTIEQYRISGMKLGRLLYQGRWFDSQALMLRETAQRWVARAITGEV HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEE TLELRRGNDYSILNTQSPNLTYAPERLSMEKVEDAPFTPGDRIGQLTMRNLDIADTRAKL EEEEECCCCEEEEECCCCCCEECHHHCCHHHHCCCCCCCCCCCCCEEECCCCCCCCHHHE DIFAKAGLLSAGEGSHIPKLENDKG EEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure STILKSLPKGENVGIAFSGGLDTSAALLWMKQKGARVFAYTANLGQPDEADYDEIPRKA CCHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHH MEFGAEKARLVDCRSQLVHEGIAAIQSGAFHVSTGGIAYFNTTPLGRAVTGTMLVSAMKE HHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHH DGVNIWGDGSTYKGNDIERFYRYGLLTNPDLRIYKPWLDQQFIDELGGRAEMSAFMTAAG CCCEEECCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHCCHHHHHHHHHHHC FAYKMSSEKAYSTDSNLLGATHEAKDLEHLDSGIRIVVPIMGVPFWREDCAVKAETVSVR EEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEEE FEEGQPVALNGKTFADPVALFLEANAIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALL ECCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH HIAYERLVTGIHNEDTIEQYRISGMKLGRLLYQGRWFDSQALMLRETAQRWVARAITGEV HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEE TLELRRGNDYSILNTQSPNLTYAPERLSMEKVEDAPFTPGDRIGQLTMRNLDIADTRAKL EEEEECCCCEEEEECCCCCCEECHHHCCHHHHCCCCCCCCCCCCCEEECCCCCCCCHHHE DIFAKAGLLSAGEGSHIPKLENDKG EEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA