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The map label for this gene is regB [H]

Identifier: 86747187

GI number: 86747187

Start: 62851

End: 64173

Strand: Reverse

Name: regB [H]

Synonym: RPB_0060

Alternate gene names: 86747187

Gene position: 64173-62851 (Counterclockwise)

Preceding gene: 86747192

Following gene: 86747186

Centisome position: 1.2

GC content: 66.74

Gene sequence:

>1323_bases
ATGTCCGACGATCTGATCTCCGCCGATTTCCGCCATCCGCGCCGCCATGTGCGGCTCGACACCATTCTCCGGCTACGCTG
GCTCGCCGCGCTGGGCCAGCTCTCGGCGATCTTCATCGTCGCCCAGGGGCTCGAATTCGACTTCGCGGTGCTGCCCTGCC
TGGCCATCATCTTCGCCTCGGCGGTGGTCAATCTGGGCTTGCAGATCGCCTTCAATCCGATGCAGCGGATGGAGCCGATC
TATGCGGCGCTGCTGCTGGCGCTGAACATCGCCGAACTCGCCGGCCTGCTGTATTTCACCGGCGGGCTGCAGAATCCGTT
CGCGTTCCTGTTCCTCGGCCCGGTGCTGATCGCCGCCACCGCGCTGCCGACAAGGATGACGATCGCGCTCGGCGTCTTCG
CCGCCGGCTGCGCCGCGCTGCTCGGCTACAATCATCAGCCGCTGCCCTGGGCCGGCGACGAGGCGGTGCAGCTTCCGGAA
ATCTATCTGGTCGGCGTCTGGCTCTCGATCCTGCTCGCGATCGGCGTCACCAGCGTCTACACCTTCCAGGTCACCGAGGA
GGCGCGCAAGCTCGCCGACGCGCTGTCGGCGACCGAGCTGGTGCTGGAGCGCGAGCAGCATCTGACCCAGATCGACGGGC
TCGCCGCCGCCGCCGCGCACGAACTCGGCACGCCGCTGTCGACGATCTTCCTGATCTCGCGCGAACTGGAGAAGACCGCG
CCGCCGGAGATGGCCGGCGATCTCAAGACGCTGCGTGAGCAGGCGCAGCGCTGCCGCGAGATCCTCGCCAAGATCTCGCA
TCTCAACGCCGCCGGCGCGCCGTTCGACATGATGCCGCTGTCGACGCTGATCGAGGAGGCGGTGGCGCCGCACCGCGATT
TCGGCGTCACGATCAAGATCCGGGTCGCGGTCTCCGGCGTCGCCGAGCCGGTGGTGATGCGTAATCCGGCAATCCTTTAC
GGCATCGGCAACATCCTGGAGAACGCCGTCGATTTCGCCCGCGACACCGTCGAGGTCAACGCCTGGTGGAATGCCGAGAC
CGTCCAGATCATGATCTCGGACGACGGGCCGGGCATCAAACCCGACCTCCTGAAGCGGATCGGTGAGCCGTATCTATCGC
GGCGCCGCCATGCCGACGACGCCTCGAACGAGCGTTCCGGCCTCGGGCTGGGGGTGTTCATCGCCCGCACCCTGCTGGAG
CGCACCGGCGCCAAAGTCTCGTTCCGCAACAAGCTGTTCCCCGATCACGGCGCGGTGGTCCAGCTCACCTGGCCGCGCAA
CCGCTTCGAGAATTCCGAAATCTCCGCCGTCGCAGAGGTTTGA

Upstream 100 bases:

>100_bases
CCTGTTTGCCGATTGCGGCGGGACTGCGCAAGCGCCGACGCGGGCGTCCGCGACCTCGCCGCGAATTGTGAACGGGCGCG
GCGGCGCGTAGTGTCGGCTC

Downstream 100 bases:

>100_bases
CCGAGGCGCGCCGTCCGGTCGCAGGGCGGGCTCCGGCCCGGGCCTTGGCATTGTCGCACCCCGTCGCCATATCTTTTGCG
TCGACGCTCTCGATTCTTGT

Product: periplasmic sensor signal transduction histidine kinase

Products: NA

Alternate protein names: Protein prrB [H]

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MSDDLISADFRHPRRHVRLDTILRLRWLAALGQLSAIFIVAQGLEFDFAVLPCLAIIFASAVVNLGLQIAFNPMQRMEPI
YAALLLALNIAELAGLLYFTGGLQNPFAFLFLGPVLIAATALPTRMTIALGVFAAGCAALLGYNHQPLPWAGDEAVQLPE
IYLVGVWLSILLAIGVTSVYTFQVTEEARKLADALSATELVLEREQHLTQIDGLAAAAAHELGTPLSTIFLISRELEKTA
PPEMAGDLKTLREQAQRCREILAKISHLNAAGAPFDMMPLSTLIEEAVAPHRDFGVTIKIRVAVSGVAEPVVMRNPAILY
GIGNILENAVDFARDTVEVNAWWNAETVQIMISDDGPGIKPDLLKRIGEPYLSRRRHADDASNERSGLGLGVFIARTLLE
RTGAKVSFRNKLFPDHGAVVQLTWPRNRFENSEISAVAEV

Sequences:

>Translated_440_residues
MSDDLISADFRHPRRHVRLDTILRLRWLAALGQLSAIFIVAQGLEFDFAVLPCLAIIFASAVVNLGLQIAFNPMQRMEPI
YAALLLALNIAELAGLLYFTGGLQNPFAFLFLGPVLIAATALPTRMTIALGVFAAGCAALLGYNHQPLPWAGDEAVQLPE
IYLVGVWLSILLAIGVTSVYTFQVTEEARKLADALSATELVLEREQHLTQIDGLAAAAAHELGTPLSTIFLISRELEKTA
PPEMAGDLKTLREQAQRCREILAKISHLNAAGAPFDMMPLSTLIEEAVAPHRDFGVTIKIRVAVSGVAEPVVMRNPAILY
GIGNILENAVDFARDTVEVNAWWNAETVQIMISDDGPGIKPDLLKRIGEPYLSRRRHADDASNERSGLGLGVFIARTLLE
RTGAKVSFRNKLFPDHGAVVQLTWPRNRFENSEISAVAEV
>Mature_439_residues
SDDLISADFRHPRRHVRLDTILRLRWLAALGQLSAIFIVAQGLEFDFAVLPCLAIIFASAVVNLGLQIAFNPMQRMEPIY
AALLLALNIAELAGLLYFTGGLQNPFAFLFLGPVLIAATALPTRMTIALGVFAAGCAALLGYNHQPLPWAGDEAVQLPEI
YLVGVWLSILLAIGVTSVYTFQVTEEARKLADALSATELVLEREQHLTQIDGLAAAAAHELGTPLSTIFLISRELEKTAP
PEMAGDLKTLREQAQRCREILAKISHLNAAGAPFDMMPLSTLIEEAVAPHRDFGVTIKIRVAVSGVAEPVVMRNPAILYG
IGNILENAVDFARDTVEVNAWWNAETVQIMISDDGPGIKPDLLKRIGEPYLSRRRHADDASNERSGLGLGVFIARTLLER
TGAKVSFRNKLFPDHGAVVQLTWPRNRFENSEISAVAEV

Specific function: Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as we

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 48010; Mature: 47879

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDLISADFRHPRRHVRLDTILRLRWLAALGQLSAIFIVAQGLEFDFAVLPCLAIIFAS
CCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEHEECCCCCHHHHHHHHHHHHHH
AVVNLGLQIAFNPMQRMEPIYAALLLALNIAELAGLLYFTGGLQNPFAFLFLGPVLIAAT
HHHHCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ALPTRMTIALGVFAAGCAALLGYNHQPLPWAGDEAVQLPEIYLVGVWLSILLAIGVTSVY
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHE
TFQVTEEARKLADALSATELVLEREQHLTQIDGLAAAAAHELGTPLSTIFLISRELEKTA
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PPEMAGDLKTLREQAQRCREILAKISHLNAAGAPFDMMPLSTLIEEAVAPHRDFGVTIKI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEE
RVAVSGVAEPVVMRNPAILYGIGNILENAVDFARDTVEVNAWWNAETVQIMISDDGPGIK
EEEECCCCCCHHCCCCCCEEEHHHHHHHHHHHHHCCEEEEEEECCEEEEEEEECCCCCCC
PDLLKRIGEPYLSRRRHADDASNERSGLGLGVFIARTLLERTGAKVSFRNKLFPDHGAVV
HHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCEE
QLTWPRNRFENSEISAVAEV
EEECCCCCCCCCCHHHHCCC
>Mature Secondary Structure 
SDDLISADFRHPRRHVRLDTILRLRWLAALGQLSAIFIVAQGLEFDFAVLPCLAIIFAS
CCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEHEECCCCCHHHHHHHHHHHHHH
AVVNLGLQIAFNPMQRMEPIYAALLLALNIAELAGLLYFTGGLQNPFAFLFLGPVLIAAT
HHHHCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ALPTRMTIALGVFAAGCAALLGYNHQPLPWAGDEAVQLPEIYLVGVWLSILLAIGVTSVY
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHE
TFQVTEEARKLADALSATELVLEREQHLTQIDGLAAAAAHELGTPLSTIFLISRELEKTA
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PPEMAGDLKTLREQAQRCREILAKISHLNAAGAPFDMMPLSTLIEEAVAPHRDFGVTIKI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEE
RVAVSGVAEPVVMRNPAILYGIGNILENAVDFARDTVEVNAWWNAETVQIMISDDGPGIK
EEEECCCCCCHHCCCCCCEEEHHHHHHHHHHHHHCCEEEEEEECCEEEEEEEECCCCCCC
PDLLKRIGEPYLSRRRHADDASNERSGLGLGVFIARTLLERTGAKVSFRNKLFPDHGAVV
HHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCEE
QLTWPRNRFENSEISAVAEV
EEECCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7751278; 10358089 [H]