| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747158
Identifier: 86747158
GI number: 86747158
Start: 29453
End: 29962
Strand: Reverse
Name: 86747158
Synonym: RPB_0031
Alternate gene names: NA
Gene position: 29962-29453 (Counterclockwise)
Preceding gene: 86747162
Following gene: 86747157
Centisome position: 0.56
GC content: 71.37
Gene sequence:
>510_bases ATGGATGCGGCCACGCTGCGCGCCACCCAGGCCCCACTCAAGGAGCGCTTCAAATCCGACCCGGCGGCGGCGCTGATCAC GCTGACGGCCAAAGGCGCGGTCGACGGCCCGGGCATCGCCTGCCGGCTCGAGACCGGCCGCGGGCCGGCGCAGGCCGGGC TACATCCGTCGGCCGGCGGCTCCGGGCTCGATCTGTGCTCCGGCGACATGCTGCTGGAGGCGCTGGTGGCCTGTGCGGGG GTGACGCTGAAGACGGTCGCCACCGCGATCGAGTTGCCGCTGACCGATGGCCGCGTCACCGCGGAGGGCGACCTCGACGT GCGCGGCGCGCTCGGCATCGACAAGGACGCGCCGGTCGGCTTCCGCGACATCCGGCTGCGGCTCGAGGTTGCGACCGATG CGCCGCAGGACCAGCTCGACCTGCTGCTGAAGCTCACCGAGCGCTATTGCGTGGTGTACCAGACCATCAAAAACGGCCCG AAGGTCTCGGTGTCGCTCGAGCGGGTGTGA
Upstream 100 bases:
>100_bases TCGCCCGCCATGCGTCGGTTCGGGCCGGCGGGACGCATGCCAGGTGACAGGCGCCGAATTCCGGCATTAGATACCAGAAA ACAGCCAAGGGAGAGACGTC
Downstream 100 bases:
>100_bases GCGGGGCGCCGTTCGGCGGCAGGTCTATCAACATGTCGTCCCCGCGCAGGCGGGGACCCATACGCCGCAGCCTTGCGATG AGGGCAATGTGGTGGAGACC
Product: OsmC-like protein
Products: NA
Alternate protein names: OsmC-Like Protein; Osmc Family Protein
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MDAATLRATQAPLKERFKSDPAAALITLTAKGAVDGPGIACRLETGRGPAQAGLHPSAGGSGLDLCSGDMLLEALVACAG VTLKTVATAIELPLTDGRVTAEGDLDVRGALGIDKDAPVGFRDIRLRLEVATDAPQDQLDLLLKLTERYCVVYQTIKNGP KVSVSLERV
Sequences:
>Translated_169_residues MDAATLRATQAPLKERFKSDPAAALITLTAKGAVDGPGIACRLETGRGPAQAGLHPSAGGSGLDLCSGDMLLEALVACAG VTLKTVATAIELPLTDGRVTAEGDLDVRGALGIDKDAPVGFRDIRLRLEVATDAPQDQLDLLLKLTERYCVVYQTIKNGP KVSVSLERV >Mature_169_residues MDAATLRATQAPLKERFKSDPAAALITLTAKGAVDGPGIACRLETGRGPAQAGLHPSAGGSGLDLCSGDMLLEALVACAG VTLKTVATAIELPLTDGRVTAEGDLDVRGALGIDKDAPVGFRDIRLRLEVATDAPQDQLDLLLKLTERYCVVYQTIKNGP KVSVSLERV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17592; Mature: 17592
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAATLRATQAPLKERFKSDPAAALITLTAKGAVDGPGIACRLETGRGPAQAGLHPSAGG CCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCHHCCCCCCCCC SGLDLCSGDMLLEALVACAGVTLKTVATAIELPLTDGRVTAEGDLDVRGALGIDKDAPVG CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEECCCCCEEECCCCCCCCCCC FRDIRLRLEVATDAPQDQLDLLLKLTERYCVVYQTIKNGPKVSVSLERV HHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC >Mature Secondary Structure MDAATLRATQAPLKERFKSDPAAALITLTAKGAVDGPGIACRLETGRGPAQAGLHPSAGG CCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCHHCCCCCCCCC SGLDLCSGDMLLEALVACAGVTLKTVATAIELPLTDGRVTAEGDLDVRGALGIDKDAPVG CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEECCCCCEEECCCCCCCCCCC FRDIRLRLEVATDAPQDQLDLLLKLTERYCVVYQTIKNGPKVSVSLERV HHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA