| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747147
Identifier: 86747147
GI number: 86747147
Start: 20675
End: 21277
Strand: Reverse
Name: 86747147
Synonym: RPB_0020
Alternate gene names: NA
Gene position: 21277-20675 (Counterclockwise)
Preceding gene: 86747149
Following gene: 86747146
Centisome position: 0.4
GC content: 64.84
Gene sequence:
>603_bases ATGACCCAGCCGGCCCCGCAATTCCTGTTCGATTTCGGCAGCCCCAATGCGTTTCTCAGCCACCGGGCGATCCCGGCGAT CGAGCGGCGCATCGGCGTCACATTCGACTACGTCCCGGTGCTGCTCGGCGGCATCTTCAAGGCCACCAACAACAAATCCC CGGCCGAGACGCTGGCCGGCGTCAGGAACAAGCGCGAATTCATGGCGCTGGAGACCGAGCGCTTCCTGAAGCGCTTCGGC GTCACGCCCTATGTGTGGAATCCCAACTTCCCGGTGAACACCCTCAATCTGATGCGCGCCGCGGTTGCGGCGCAGCGCGA CGGCGTGTTGGCGCAATATGTCGACGCCGCCTTCCACCACATGTGGGTCGAGCCAAAGAAGATGGACGATCCGCAGATCG CAGCCCAGGCGCTGGCGTCGTCGGGGCTCGATGCGGAAAAGCTGTTCGCCGGCGCGCAGGAGCCGGAGATCAAGGCGAAG CTGATCGCCAACACCGAGGACGCGGTCGCCCGCGGCGTGTTCGGCTCGCCGACCTTCTTCGTCGGCGCCGAGATGTTCTT CGGCAAGGAGCAACTCCGCGACGTCGAGGAGATGTACGGCTGA
Upstream 100 bases:
>100_bases CCGCGACCCGGTTGATTGCCCGCCGCCGACCCGCTAGGCTGCTATGGCATGACGATGATCATATAAGGCGCGCCGTACGC GCCGCGACCGGGAGTGACCA
Downstream 100 bases:
>100_bases GTCCGCGATTTCAAAGCGCCCGACACCTCCGTCATGGCCGGGCTCGTCCCGGCCATCCACGGACACCGGCGCAGCGGTTG CGTCATCGTGGATGCCCGGG
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: 2-Hydroxychromene-2-Carboxylate Isomerase; 2-Hydroxychromene-2-Carboxylate Isomerase Family Protein; Dsba Oxidoreductase; Isomerase; 2-Hydroxychromene-2-Carboxylate Isomerase Protein; DSBA-Like Thioredoxin Domain Protein; Thioredoxin Oxidoreductase; DSBA-Like Thioredoxin Domain-Containing; DSBA-Like Thioredoxin Domain; 2-Hydroxychromene-2- Carboxylate Isomerase Family Protein
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTQPAPQFLFDFGSPNAFLSHRAIPAIERRIGVTFDYVPVLLGGIFKATNNKSPAETLAGVRNKREFMALETERFLKRFG VTPYVWNPNFPVNTLNLMRAAVAAQRDGVLAQYVDAAFHHMWVEPKKMDDPQIAAQALASSGLDAEKLFAGAQEPEIKAK LIANTEDAVARGVFGSPTFFVGAEMFFGKEQLRDVEEMYG
Sequences:
>Translated_200_residues MTQPAPQFLFDFGSPNAFLSHRAIPAIERRIGVTFDYVPVLLGGIFKATNNKSPAETLAGVRNKREFMALETERFLKRFG VTPYVWNPNFPVNTLNLMRAAVAAQRDGVLAQYVDAAFHHMWVEPKKMDDPQIAAQALASSGLDAEKLFAGAQEPEIKAK LIANTEDAVARGVFGSPTFFVGAEMFFGKEQLRDVEEMYG >Mature_199_residues TQPAPQFLFDFGSPNAFLSHRAIPAIERRIGVTFDYVPVLLGGIFKATNNKSPAETLAGVRNKREFMALETERFLKRFGV TPYVWNPNFPVNTLNLMRAAVAAQRDGVLAQYVDAAFHHMWVEPKKMDDPQIAAQALASSGLDAEKLFAGAQEPEIKAKL IANTEDAVARGVFGSPTFFVGAEMFFGKEQLRDVEEMYG
Specific function: Unknown
COG id: COG3917
COG function: function code Q; 2-hydroxychromene-2-carboxylate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22160; Mature: 22028
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPAPQFLFDFGSPNAFLSHRAIPAIERRIGVTFDYVPVLLGGIFKATNNKSPAETLAG CCCCCCHHHHHCCCCCHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHH VRNKREFMALETERFLKRFGVTPYVWNPNFPVNTLNLMRAAVAAQRDGVLAQYVDAAFHH HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH MWVEPKKMDDPQIAAQALASSGLDAEKLFAGAQEPEIKAKLIANTEDAVARGVFGSPTFF HCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHEECCCHHHHHHCCCCCCHHH VGAEMFFGKEQLRDVEEMYG HHHHHHHCHHHHHHHHHHCC >Mature Secondary Structure TQPAPQFLFDFGSPNAFLSHRAIPAIERRIGVTFDYVPVLLGGIFKATNNKSPAETLAG CCCCCHHHHHCCCCCHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHH VRNKREFMALETERFLKRFGVTPYVWNPNFPVNTLNLMRAAVAAQRDGVLAQYVDAAFHH HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH MWVEPKKMDDPQIAAQALASSGLDAEKLFAGAQEPEIKAKLIANTEDAVARGVFGSPTFF HCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHEECCCHHHHHHCCCCCCHHH VGAEMFFGKEQLRDVEEMYG HHHHHHHCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA