Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86609175
Identifier: 86609175
GI number: 86609175
Start: 1796868
End: 1797500
Strand: Reverse
Name: 86609175
Synonym: CYB_1714
Alternate gene names: NA
Gene position: 1797500-1796868 (Counterclockwise)
Preceding gene: 86609181
Following gene: 86609173
Centisome position: 59.0
GC content: 61.14
Gene sequence:
>633_bases ATGAATGCCAAACTGCTTTTCCTACCGCTGGCTTTGGGGCTGTCTGTAGCTCCGGCCACCGCCGTTTTTCCGCAAACCCT GGGCATCTACCCTCCTTTACAGAGGCTGCAACTGGCCGATACCCGTCAGTTGGATGCTGGCACTCGCTCCATCATTGTCA ACCCCGTTCCTTCCGACCTGCGGGTGAATCTGGAGCTGGATCGGCACGGGTCTAACCCCATCTACCGGCCTGGCGAGCCG ATTGCCATTACCCTGAGCACCAACCGCGATGCCTACGTTTACCTGTTCAGCATCCAAGCCGATGGCCGTACCCATCTGAT TTTGCCCAACCGCTTTTCCGGTGGCAACGAGTTTCTGCGGGCCGGAGAAGTGCGCACCTTCCCGCCGCCAGGGGCCAGCT ATCGGTTGACCATCGCTCCACCCTTCGGCCAAGCCCAGGTGTTGGCGGTGGCCTCTCCCCGTCCGCTGAACTTCCAGGAG ATTGCCTCTTTTGAGCAGAGTGGCTCCTTTGCCGACGTGCGGGTGCGGGGATCCCAACTGGGCAATGCCATTGCCCGCGC CATCATCGTCGAGGGGATCCCTTCGGACCAGTGGGTGACGGCCACTCGGTTCTATCGGGTTGCCCCGCGCTAA
Upstream 100 bases:
>100_bases AGAAACTGCCGCGGCAAGAGATTGGAGATTGCGCAAAGCCTGACCTGCATAACCTGCGCCCCTTCCTAGGATGAACATAG CCATTGATTGGGTGTGAACC
Downstream 100 bases:
>100_bases TCCAAGCTCTGAGACCTCAGGTGGATGGCCCGCACAGGATCCCCTTCATCGGGTATATGACCAGCCCCACCGTTCAAGCT GGGAAGGAAGTCAACCACCC
Product: S-layer domain-containing protein
Products: NA
Alternate protein names: PEGA Domain-Containing Protein; S-Layer-Like Array-Related Protein; S-Layer-Like Protein Array-Related Protein; S-Layer-Like Protein Array-Like Protein; PEGA Domain Protein; S-Layer Domain-Containing Protein; Pega Domain Protein; S-Layer Protein; S-Layer-Like Protein
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MNAKLLFLPLALGLSVAPATAVFPQTLGIYPPLQRLQLADTRQLDAGTRSIIVNPVPSDLRVNLELDRHGSNPIYRPGEP IAITLSTNRDAYVYLFSIQADGRTHLILPNRFSGGNEFLRAGEVRTFPPPGASYRLTIAPPFGQAQVLAVASPRPLNFQE IASFEQSGSFADVRVRGSQLGNAIARAIIVEGIPSDQWVTATRFYRVAPR
Sequences:
>Translated_210_residues MNAKLLFLPLALGLSVAPATAVFPQTLGIYPPLQRLQLADTRQLDAGTRSIIVNPVPSDLRVNLELDRHGSNPIYRPGEP IAITLSTNRDAYVYLFSIQADGRTHLILPNRFSGGNEFLRAGEVRTFPPPGASYRLTIAPPFGQAQVLAVASPRPLNFQE IASFEQSGSFADVRVRGSQLGNAIARAIIVEGIPSDQWVTATRFYRVAPR >Mature_210_residues MNAKLLFLPLALGLSVAPATAVFPQTLGIYPPLQRLQLADTRQLDAGTRSIIVNPVPSDLRVNLELDRHGSNPIYRPGEP IAITLSTNRDAYVYLFSIQADGRTHLILPNRFSGGNEFLRAGEVRTFPPPGASYRLTIAPPFGQAQVLAVASPRPLNFQE IASFEQSGSFADVRVRGSQLGNAIARAIIVEGIPSDQWVTATRFYRVAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22904; Mature: 22904
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAKLLFLPLALGLSVAPATAVFPQTLGIYPPLQRLQLADTRQLDAGTRSIIVNPVPSDL CCCEEEEEEEECCCCCCCCHHHCHHHCCCCCCHHHEEECCCCCCCCCCEEEEEECCCCCE RVNLELDRHGSNPIYRPGEPIAITLSTNRDAYVYLFSIQADGRTHLILPNRFSGGNEFLR EEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCEEEEEECCCCCCCHHHHC AGEVRTFPPPGASYRLTIAPPFGQAQVLAVASPRPLNFQEIASFEQSGSFADVRVRGSQL CCCEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECHHH GNAIARAIIVEGIPSDQWVTATRFYRVAPR HHHHHHEEEEECCCCCCEEEEEEEEEECCC >Mature Secondary Structure MNAKLLFLPLALGLSVAPATAVFPQTLGIYPPLQRLQLADTRQLDAGTRSIIVNPVPSDL CCCEEEEEEEECCCCCCCCHHHCHHHCCCCCCHHHEEECCCCCCCCCCEEEEEECCCCCE RVNLELDRHGSNPIYRPGEPIAITLSTNRDAYVYLFSIQADGRTHLILPNRFSGGNEFLR EEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCEEEEEECCCCCCCHHHHC AGEVRTFPPPGASYRLTIAPPFGQAQVLAVASPRPLNFQEIASFEQSGSFADVRVRGSQL CCCEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECHHH GNAIARAIIVEGIPSDQWVTATRFYRVAPR HHHHHHEEEEECCCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA