Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is mpaA [H]
Identifier: 86609122
GI number: 86609122
Start: 1742629
End: 1743189
Strand: Reverse
Name: mpaA [H]
Synonym: CYB_1662
Alternate gene names: 86609122
Gene position: 1743189-1742629 (Counterclockwise)
Preceding gene: 86609123
Following gene: 86609121
Centisome position: 57.22
GC content: 62.75
Gene sequence:
>561_bases GTGGAGGGCTATGCCCTGATCGAGCGCTATGTGGCTTCTGGGAAATGGGGATCCCTGGCCGGGAAAGCGACCCTATGGGC AATCCCTCGCTTGAACCCGGATGGCTGTGCCCTGGGGCAACGGCTCAATGCCAACGGTGTGGATCTCAACCGCAATCTGC CCACCCAAGATTGGATCCCGGCCTCTTTGGAAGCTCGCTATCCGCCCGGATCGGCCCCAGGCTCCGAGCCCGAAACGCAA GTGTTGTTGACGAGTTTGGCCCGGATTCAGCCCCAGTTTATCCTTTCTGCCCACTCCTGCCAGGCGCACCCCTGCGTGAA CTACAACGGCCCTGCCCTTGAGCTGGCCCAGGTGATGGCCGCTTGCAACGGCTTGCCCATTACCGCCGACATTGGCTACC CTACCCCTGGTTCTCTGGGCACTTGGGCAGGGCAGGAACGGCGGATCCCAACCCTAACGCTGGAAATCCTGCGGGGCACT CCCCTCGATCAAGTCTGGCAAGAGCAGGCCGAGGCGCTGCAGGCGGTGTTGGAGTGGGCAGCCCAAGGCGATGCCTTCTG A
Upstream 100 bases:
>100_bases GGTCATCGGCTACTCGGTGCAGGGACGTCCTATTCACCTTTGGCAGCTCACCCAAGGGAGCCGCTCCTTGCTGCTGCTCG GCGGGGTACATGGGGATGAG
Downstream 100 bases:
>100_bases CCGGTGTCAAGATCTCTGAACTTTCGTTGCCAATCTGCCTAGTTCGTTCAAGATATCTGGGGTTTTCTCGCCCAAATCTT CTACAACACAGATAGGTGGG
Product: zinc carboxypeptidase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MEGYALIERYVASGKWGSLAGKATLWAIPRLNPDGCALGQRLNANGVDLNRNLPTQDWIPASLEARYPPGSAPGSEPETQ VLLTSLARIQPQFILSAHSCQAHPCVNYNGPALELAQVMAACNGLPITADIGYPTPGSLGTWAGQERRIPTLTLEILRGT PLDQVWQEQAEALQAVLEWAAQGDAF
Sequences:
>Translated_186_residues MEGYALIERYVASGKWGSLAGKATLWAIPRLNPDGCALGQRLNANGVDLNRNLPTQDWIPASLEARYPPGSAPGSEPETQ VLLTSLARIQPQFILSAHSCQAHPCVNYNGPALELAQVMAACNGLPITADIGYPTPGSLGTWAGQERRIPTLTLEILRGT PLDQVWQEQAEALQAVLEWAAQGDAF >Mature_186_residues MEGYALIERYVASGKWGSLAGKATLWAIPRLNPDGCALGQRLNANGVDLNRNLPTQDWIPASLEARYPPGSAPGSEPETQ VLLTSLARIQPQFILSAHSCQAHPCVNYNGPALELAQVMAACNGLPITADIGYPTPGSLGTWAGQERRIPTLTLEILRGT PLDQVWQEQAEALQAVLEWAAQGDAF
Specific function: Unknown
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510938, Length=126, Percent_Identity=41.2698412698413, Blast_Score=90, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000834 [H]
Pfam domain/function: PF00246 Peptidase_M14 [H]
EC number: NA
Molecular weight: Translated: 19957; Mature: 19957
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGYALIERYVASGKWGSLAGKATLWAIPRLNPDGCALGQRLNANGVDLNRNLPTQDWIP CCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC ASLEARYPPGSAPGSEPETQVLLTSLARIQPQFILSAHSCQAHPCVNYNGPALELAQVMA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHEECCCCCCCCCCCCCCCHHHHHHHHH ACNGLPITADIGYPTPGSLGTWAGQERRIPTLTLEILRGTPLDQVWQEQAEALQAVLEWA HHCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHH AQGDAF HCCCCC >Mature Secondary Structure MEGYALIERYVASGKWGSLAGKATLWAIPRLNPDGCALGQRLNANGVDLNRNLPTQDWIP CCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC ASLEARYPPGSAPGSEPETQVLLTSLARIQPQFILSAHSCQAHPCVNYNGPALELAQVMA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHEECCCCCCCCCCCCCCCHHHHHHHHH ACNGLPITADIGYPTPGSLGTWAGQERRIPTLTLEILRGTPLDQVWQEQAEALQAVLEWA HHCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHH AQGDAF HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]