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The map label for this gene is 86609123

Identifier: 86609123

GI number: 86609123

Start: 1743355

End: 1743753

Strand: Reverse

Name: 86609123

Synonym: CYB_1663

Alternate gene names: NA

Gene position: 1743753-1743355 (Counterclockwise)

Preceding gene: 86609124

Following gene: 86609122

Centisome position: 57.23

GC content: 58.4

Gene sequence:

>399_bases
ATGAACTCGATTGTGTTGATGGGCGAGGTTCTGTCTGAGCCAGAGCTGCGCTACACCCTTGATAACTTAGCTGTTGCGTC
CTTGGTGATTGGCTTTCCCAGCTTGCGCCCGGATGAGCCGCCCTACCGGGTGCGCGTTTCCTCTTTTGGAGAACTGGCCA
AAAGGGTGGTGGACACCTGCCATGTGGGCGACCAAATCACAGTGGAAGGCCAACTGCACATGAATGTGGTGGAGCGAGAT
GGGCGCAAGGAAAAGCTGGCCGAGATCACCGCGCGCCGTGTCCATCAGCTGGGATCCGCTCGCGTCCTCTCTCTGACGGG
GATGGGTGAACCGGCAACTGGGGAATCCTCTGAAGGGGATGTCCCTTCCCCACCAGATCCCAACGATATCCCGTTCTAG

Upstream 100 bases:

>100_bases
CGCCACATGACTCTCCGCGTCGGCTAGGTTTGACGGCATCCTGGCCTGCGGGCATGATGGAAGTGCCCTGAGCTGCCCCT
TATCCCTGGATGGCTCCGTT

Downstream 100 bases:

>100_bases
AGGTTGTGAGATTTGTCGGGATCCCCCATGTCTCAAAAACTTGGCGAACCCTTGGGATCCCTGCAGGTCATCGGCTACTC
GGTGCAGGGACGTCCTATTC

Product: single-strand binding family protein

Products: NA

Alternate protein names: Thylakoid-associated SSB [H]

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MNSIVLMGEVLSEPELRYTLDNLAVASLVIGFPSLRPDEPPYRVRVSSFGELAKRVVDTCHVGDQITVEGQLHMNVVERD
GRKEKLAEITARRVHQLGSARVLSLTGMGEPATGESSEGDVPSPPDPNDIPF

Sequences:

>Translated_132_residues
MNSIVLMGEVLSEPELRYTLDNLAVASLVIGFPSLRPDEPPYRVRVSSFGELAKRVVDTCHVGDQITVEGQLHMNVVERD
GRKEKLAEITARRVHQLGSARVLSLTGMGEPATGESSEGDVPSPPDPNDIPF
>Mature_132_residues
MNSIVLMGEVLSEPELRYTLDNLAVASLVIGFPSLRPDEPPYRVRVSSFGELAKRVVDTCHVGDQITVEGQLHMNVVERD
GRKEKLAEITARRVHQLGSARVLSLTGMGEPATGESSEGDVPSPPDPNDIPF

Specific function: Unknown

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 14364; Mature: 14364

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIVLMGEVLSEPELRYTLDNLAVASLVIGFPSLRPDEPPYRVRVSSFGELAKRVVDTC
CCCEEEEHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH
HVGDQITVEGQLHMNVVERDGRKEKLAEITARRVHQLGSARVLSLTGMGEPATGESSEGD
CCCCEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
VPSPPDPNDIPF
CCCCCCCCCCCC
>Mature Secondary Structure
MNSIVLMGEVLSEPELRYTLDNLAVASLVIGFPSLRPDEPPYRVRVSSFGELAKRVVDTC
CCCEEEEHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH
HVGDQITVEGQLHMNVVERDGRKEKLAEITARRVHQLGSARVLSLTGMGEPATGESSEGD
CCCCEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
VPSPPDPNDIPF
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]