Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86609071
Identifier: 86609071
GI number: 86609071
Start: 1679429
End: 1679800
Strand: Reverse
Name: 86609071
Synonym: CYB_1608
Alternate gene names: NA
Gene position: 1679800-1679429 (Counterclockwise)
Preceding gene: 86609072
Following gene: 86609070
Centisome position: 55.14
GC content: 59.41
Gene sequence:
>372_bases ATGGCGAGCCCGTTGAACTTCATCCCTGGTTTTGAGGCAGTGCAAACTCCGAGCCCCGACAACCGGCTCTGGCAATACCT GCAATCTCAGGATCCCAGCGTCTTTCAGGATATTGCCCGCAATTCTTCCCCAGAAGTGCTGGAGATCTTGGGCCACAACA TCCGCAGCTTGGTGGGGAGCTTGCCCTCCGATCAATTCGGGGTTCAGATCATCACCAACCGCGAGAGCTTGGCCAAAATG CTCTCCGGCGCGATGATGGGCGGCTATTTCCTGCGGGTCATGGAGCAGCGCCTAGCCCTGGAGCAATCTTTGGGCAGTGC CTCCCAGCCTGCCAGCGCGGATCAGCCTTCGCCAGCAGAGGAGGAGGGCTAG
Upstream 100 bases:
>100_bases TGGGATAGCCCAAATTCCGGGAACGGCAAAGGTCTGTGGGATCAGGCCGAGCGGCCCGGTTGGGATTGCATCTGCTGTGT TTGTGGAGCTTGGTTACTCC
Downstream 100 bases:
>100_bases GCTTGCAATCCACCTTTTAGCGCCGCCGAGGAGGTTCCATGCTGGATGCGGGTTTCCAGGCAAAGGGATCCCAGTTCAGC AGCCCACCGCGGCGGATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MASPLNFIPGFEAVQTPSPDNRLWQYLQSQDPSVFQDIARNSSPEVLEILGHNIRSLVGSLPSDQFGVQIITNRESLAKM LSGAMMGGYFLRVMEQRLALEQSLGSASQPASADQPSPAEEEG
Sequences:
>Translated_123_residues MASPLNFIPGFEAVQTPSPDNRLWQYLQSQDPSVFQDIARNSSPEVLEILGHNIRSLVGSLPSDQFGVQIITNRESLAKM LSGAMMGGYFLRVMEQRLALEQSLGSASQPASADQPSPAEEEG >Mature_122_residues ASPLNFIPGFEAVQTPSPDNRLWQYLQSQDPSVFQDIARNSSPEVLEILGHNIRSLVGSLPSDQFGVQIITNRESLAKML SGAMMGGYFLRVMEQRLALEQSLGSASQPASADQPSPAEEEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13378; Mature: 13247
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPLNFIPGFEAVQTPSPDNRLWQYLQSQDPSVFQDIARNSSPEVLEILGHNIRSLVGS CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHC LPSDQFGVQIITNRESLAKMLSGAMMGGYFLRVMEQRLALEQSLGSASQPASADQPSPAE CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC EEG CCC >Mature Secondary Structure ASPLNFIPGFEAVQTPSPDNRLWQYLQSQDPSVFQDIARNSSPEVLEILGHNIRSLVGS CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHC LPSDQFGVQIITNRESLAKMLSGAMMGGYFLRVMEQRLALEQSLGSASQPASADQPSPAE CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC EEG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA