Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is glxK [H]
Identifier: 86609070
GI number: 86609070
Start: 1678191
End: 1679330
Strand: Reverse
Name: glxK [H]
Synonym: CYB_1607
Alternate gene names: 86609070
Gene position: 1679330-1678191 (Counterclockwise)
Preceding gene: 86609071
Following gene: 86609069
Centisome position: 55.12
GC content: 66.84
Gene sequence:
>1140_bases TTGGTTTGCCCGGATAGTTTTAAGGGATCCCTAACAGCCACGGCGGCGGCAGAGCACATAGCCCATGGGATCCAACAGGT GCTGCCGGAAGTCGAGGTGGAGCGGCTCCCCTTGGCCGATGGGGGAGAGGGCACCCTAGAGGTATTGCTGCCGACGCTGG GGGGAGAGAAGAAGGGCCTATGGGTCACCGGCCCCCTGGGGGATCCCGTCTGGGCGGAGTACGGGGTGGCAGGAGAGCTG GCCCTGTTGGAGCTGGCCCAGGTGGCCGGCCTGACCTTGGTGCCACCGGAGCGGCGGGATCCCACCCGCACCACCACTTA TGGCCTGGGAGAGCTGTTGCGGGCCGTCTGCCGCGATCCCATCGCTGAGATCTGGATAGGTCTGGGGGGATCCGCCACCG TGGATGGAGGGGCGGGCATGGCGCAGGCCTTAGGCTATCGCCTGTTGGATGGAGCTGGGGATCCCATCGGCTGGGGCGGG GGAGAGCTGGCCCGTTTGCAGCGCATTGAGTCCCCTGAACAGCCTGTCTGGCAGGGGAAACGGGTCCGCGGCCTGTGCGA TGTGCAGAATCCCCTCACCGGCCCGTGGGGAGCCGCCGCCGTCTTTGCCCCCCAGAAGGGCGCCACCCCTTCCCAGGTGC AGCAGTTGGAGCAGGCGCTGCAGCAGTGGGCTCAAGTGGTGGAGCGAGATTTGGGCCAGGCCGTGGCCGGGATCCCGGGG GCCGGAGCCGCAGGTGGCTTAGGAGCAGGTCTGGTGGCTTTTTTGGGGGCCACTCTGGAGTCCGGGATCCAGCTCTTGGC GCGGCAATTGGCCCTGCCGGAGCGCATCCGCCGCTGCCATCTGGTCGTCACCGGAGAGGGCTGCCTCGACGAACAAAGCA CGATGGGAAAGGTGGTGGGGGCCGTGCTGGAGCAGGCTATCCAAGCCCAAAAACCCCTGCTCATCCTCTGTGGCCAGGTG ACTCCGGCAGCGCGCGCTGGGTTGGCAGCCCAGCCTCTTCCCCTTCGGGTTGGCGCCCTGTGCGACCGGATCCCCGATGT GGCAGAAGCCCAACGGCAGGCCGGCCATCACCTGGAGCAGATGACGGCCCAGGAGCTGAGAGATTTTCTGGAGCAGGATG CGGGGATTGGCCGGTTATAA
Upstream 100 bases:
>100_bases AGGCTTGCAATCCACCTTTTAGCGCCGCCGAGGAGGTTCCATGCTGGATGCGGGTTTCCAGGCAAAGGGATCCCAGTTCA GCAGCCCACCGCGGCGGATT
Downstream 100 bases:
>100_bases TGGCTTAAATCATCGTGTTTCGTAGGACATCATGGCCAGTATCGAGTTCTCCCCCGGCATCCAAGAGGTGCCCACCCAGG TGCGAGTGCTGAAATCCAAG
Product: glycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MVCPDSFKGSLTATAAAEHIAHGIQQVLPEVEVERLPLADGGEGTLEVLLPTLGGEKKGLWVTGPLGDPVWAEYGVAGEL ALLELAQVAGLTLVPPERRDPTRTTTYGLGELLRAVCRDPIAEIWIGLGGSATVDGGAGMAQALGYRLLDGAGDPIGWGG GELARLQRIESPEQPVWQGKRVRGLCDVQNPLTGPWGAAAVFAPQKGATPSQVQQLEQALQQWAQVVERDLGQAVAGIPG AGAAGGLGAGLVAFLGATLESGIQLLARQLALPERIRRCHLVVTGEGCLDEQSTMGKVVGAVLEQAIQAQKPLLILCGQV TPAARAGLAAQPLPLRVGALCDRIPDVAEAQRQAGHHLEQMTAQELRDFLEQDAGIGRL
Sequences:
>Translated_379_residues MVCPDSFKGSLTATAAAEHIAHGIQQVLPEVEVERLPLADGGEGTLEVLLPTLGGEKKGLWVTGPLGDPVWAEYGVAGEL ALLELAQVAGLTLVPPERRDPTRTTTYGLGELLRAVCRDPIAEIWIGLGGSATVDGGAGMAQALGYRLLDGAGDPIGWGG GELARLQRIESPEQPVWQGKRVRGLCDVQNPLTGPWGAAAVFAPQKGATPSQVQQLEQALQQWAQVVERDLGQAVAGIPG AGAAGGLGAGLVAFLGATLESGIQLLARQLALPERIRRCHLVVTGEGCLDEQSTMGKVVGAVLEQAIQAQKPLLILCGQV TPAARAGLAAQPLPLRVGALCDRIPDVAEAQRQAGHHLEQMTAQELRDFLEQDAGIGRL >Mature_379_residues MVCPDSFKGSLTATAAAEHIAHGIQQVLPEVEVERLPLADGGEGTLEVLLPTLGGEKKGLWVTGPLGDPVWAEYGVAGEL ALLELAQVAGLTLVPPERRDPTRTTTYGLGELLRAVCRDPIAEIWIGLGGSATVDGGAGMAQALGYRLLDGAGDPIGWGG GELARLQRIESPEQPVWQGKRVRGLCDVQNPLTGPWGAAAVFAPQKGATPSQVQQLEQALQQWAQVVERDLGQAVAGIPG AGAAGGLGAGLVAFLGATLESGIQLLARQLALPERIRRCHLVVTGEGCLDEQSTMGKVVGAVLEQAIQAQKPLLILCGQV TPAARAGLAAQPLPLRVGALCDRIPDVAEAQRQAGHHLEQMTAQELRDFLEQDAGIGRL
Specific function: Unknown
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI145693185, Length=324, Percent_Identity=45.0617283950617, Blast_Score=253, Evalue=2e-68, Organism=Escherichia coli, GI1786724, Length=321, Percent_Identity=42.6791277258567, Blast_Score=228, Evalue=6e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 39518; Mature: 39518
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCPDSFKGSLTATAAAEHIAHGIQQVLPEVEVERLPLADGGEGTLEVLLPTLGGEKKGL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCE WVTGPLGDPVWAEYGVAGELALLELAQVAGLTLVPPERRDPTRTTTYGLGELLRAVCRDP EEECCCCCCHHHHHCCCHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCH IAEIWIGLGGSATVDGGAGMAQALGYRLLDGAGDPIGWGGGELARLQRIESPEQPVWQGK HHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC RVRGLCDVQNPLTGPWGAAAVFAPQKGATPSQVQQLEQALQQWAQVVERDLGQAVAGIPG HHCCHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AGAAGGLGAGLVAFLGATLESGIQLLARQLALPERIRRCHLVVTGEGCLDEQSTMGKVVG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHH AVLEQAIQAQKPLLILCGQVTPAARAGLAAQPLPLRVGALCDRIPDVAEAQRQAGHHLEQ HHHHHHHHHCCCEEEEECCCCHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH MTAQELRDFLEQDAGIGRL HHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVCPDSFKGSLTATAAAEHIAHGIQQVLPEVEVERLPLADGGEGTLEVLLPTLGGEKKGL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCE WVTGPLGDPVWAEYGVAGELALLELAQVAGLTLVPPERRDPTRTTTYGLGELLRAVCRDP EEECCCCCCHHHHHCCCHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCH IAEIWIGLGGSATVDGGAGMAQALGYRLLDGAGDPIGWGGGELARLQRIESPEQPVWQGK HHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC RVRGLCDVQNPLTGPWGAAAVFAPQKGATPSQVQQLEQALQQWAQVVERDLGQAVAGIPG HHCCHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AGAAGGLGAGLVAFLGATLESGIQLLARQLALPERIRRCHLVVTGEGCLDEQSTMGKVVG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHH AVLEQAIQAQKPLLILCGQVTPAARAGLAAQPLPLRVGALCDRIPDVAEAQRQAGHHLEQ HHHHHHHHHCCCEEEEECCCCHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH MTAQELRDFLEQDAGIGRL HHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132; 10086841 [H]