Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is folB-1 [H]
Identifier: 86608877
GI number: 86608877
Start: 1477034
End: 1477390
Strand: Direct
Name: folB-1 [H]
Synonym: CYB_1408
Alternate gene names: 86608877
Gene position: 1477034-1477390 (Clockwise)
Preceding gene: 86608876
Following gene: 86608878
Centisome position: 48.48
GC content: 58.82
Gene sequence:
>357_bases TTGCGAGATCGGCTGATCGTCTCCGGCCTGCGCTACTACGGTTATACCGGCCTTGATGAGGCGGAACGGGCTTTGGGGCA ATGGTTTGAGGTGGATTTCGAGTTGTGGGCGGATCTGCGCCCGGCTGCTCTCAGCGGCCAACTGTGTGATAGCCTCGACT ACCGTTCTGCAGTGGCCGGGATTGCGGAACTGGTGAAAAGCAATCAGTTTGTGCTGATCGAGAGCTTGGCGGAGGCGATT GCCGAAATGGTGCTGCGGGAGACAGGGGCCAGCAAAGCTAAGATCCGATTGACCAAGTGTCATCCCCCGATCCCGGAGCT GACGGGGCGGGTTACTGTGGAGATTGTTCGTCCCTAG
Upstream 100 bases:
>100_bases GGAGGTTGTGATGGAGCTACAGATCCCCACCAGTGTTAGCAGCGACGGTCAGCAGCCCTATCCAGATCCCGATCGGATCC CTCGGCAACCCCCTGAGCAG
Downstream 100 bases:
>100_bases AACTTCTCTTAACCCTTTCCTACCGACCCTGTGCTTGCTCTAGAACTTGCTTCTCGTACCTCTGAGGACTGGATCGAACA GGCTACCCGGCACATCGATC
Product: dihydroneopterin aldolase
Products: NA
Alternate protein names: DHNA [H]
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MRDRLIVSGLRYYGYTGLDEAERALGQWFEVDFELWADLRPAALSGQLCDSLDYRSAVAGIAELVKSNQFVLIESLAEAI AEMVLRETGASKAKIRLTKCHPPIPELTGRVTVEIVRP
Sequences:
>Translated_118_residues MRDRLIVSGLRYYGYTGLDEAERALGQWFEVDFELWADLRPAALSGQLCDSLDYRSAVAGIAELVKSNQFVLIESLAEAI AEMVLRETGASKAKIRLTKCHPPIPELTGRVTVEIVRP >Mature_118_residues MRDRLIVSGLRYYGYTGLDEAERALGQWFEVDFELWADLRPAALSGQLCDSLDYRSAVAGIAELVKSNQFVLIESLAEAI AEMVLRETGASKAKIRLTKCHPPIPELTGRVTVEIVRP
Specific function: Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin [H]
COG id: COG1539
COG function: function code H; Dihydroneopterin aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHNA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006156 - InterPro: IPR006157 [H]
Pfam domain/function: PF02152 FolB [H]
EC number: =4.1.2.25 [H]
Molecular weight: Translated: 13137; Mature: 13137
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDRLIVSGLRYYGYTGLDEAERALGQWFEVDFELWADLRPAALSGQLCDSLDYRSAVAG CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHH IAELVKSNQFVLIESLAEAIAEMVLRETGASKAKIRLTKCHPPIPELTGRVTVEIVRP HHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECC >Mature Secondary Structure MRDRLIVSGLRYYGYTGLDEAERALGQWFEVDFELWADLRPAALSGQLCDSLDYRSAVAG CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHH IAELVKSNQFVLIESLAEAIAEMVLRETGASKAKIRLTKCHPPIPELTGRVTVEIVRP HHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]