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The map label for this gene is cbaA [H]

Identifier: 86608774

GI number: 86608774

Start: 1361408

End: 1362427

Strand: Direct

Name: cbaA [H]

Synonym: CYB_1300

Alternate gene names: 86608774

Gene position: 1361408-1362427 (Clockwise)

Preceding gene: 86608767

Following gene: 86608784

Centisome position: 44.68

GC content: 59.41

Gene sequence:

>1020_bases
ATGTTGGTGACCCAGCATCCTGTCTTTCGGCGCTTTTGGTACCCGGTGATGCCCCTCAGCCGATTGGAGCAGGGATCCCC
GCAACCTTTTGAGCTGCTGGGAGAGAGGATCGTCCTTTGGCTGGACAAAGCCGGACAGCCCCAGGCAGTTGCAGATCGCT
GCTGTCATCGGTCGGCCCAATTGTCCAAGGGAATCGTCTGTGATGGCCATATCCGCTGCCCCTACCATGGGTGGGAGTTC
GATGGCACGGGAGCCTGTGTCAAAGTGCCGCAACTGCCGGATCAGGCCCGCATCCCAGAGAGCTACCGCATTCCCGCCTA
TCTCTGCCAGGCCCGCTATGGCTATGCTTGGGTGTGCTTGCATCCCCAGCCTCTACGGGGGATCCCGGTCATCCCAGAAG
CTGAGGATCCCAGTTACCGGCTCATCCACGAGTTCTACGAACGCTGGGAATGTGCCAGTTTGCGCATCTGCGAGAACGAG
TTCGACGCCGCCCACATCAGCTTTGTACACCAGAACACCTTTGGCAGTATGGAAGACTTGGTACCCAGCCACTTCGAGGT
CGAGGAGCTGGACTACGGGATCCGCACCCGCACAGTGCTCGGTGTAGCCAACCCAGAGCTGCAACAAAAAAACCTGGGCA
TTGCTGCCGCCAAAACCGAGCGCACCACCACTTCAACCTGGCATTTGCCCTTCACCAACCACCTTCACATCCGCTACCCC
AATGGCCGCAGCCATGTCATCGTCAACATCCCCACCCCCATCAACGACCGAGCCTCCCAAGTGGTGCAGTTTTGTTTGCG
CAACGACACCGAAGCCGATACCCCAGCCGCCGAGGTTATCCGCTTTGACCGGGCCGTGACCCTGGAAGACAAAGCCATTT
TGGAGACCACGGATCCCGACGTGCCCCTCACCCTCAGCGCCGAGCAGCACATGCTCACCGATAAGCCCGGGATCCTGATG
CGCAAGCAACTGGCGGCTTTGCTCAAGGCCCACAGCAGCTCCTCAAACCAGATGTTCTAG

Upstream 100 bases:

>100_bases
ATCTGCAAGATCCCCAAATAGAGATTGTGGCGCGGGCTACGGAACCGAATTCACGAATTTGCTATACAGAATCCGGCCAT
ACGATAAAGATGGTTTTGCC

Downstream 100 bases:

>100_bases
GCTGCGGGTGCCAACATACCGGCTGTAGGCGTAGATCAACCCCAGGGTGAGGCCGGTAACCAAAAAGCTGAGGGCCGCCC
CGAAAGGATAGTCCAGGCTG

Product: Rieske family iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MLVTQHPVFRRFWYPVMPLSRLEQGSPQPFELLGERIVLWLDKAGQPQAVADRCCHRSAQLSKGIVCDGHIRCPYHGWEF
DGTGACVKVPQLPDQARIPESYRIPAYLCQARYGYAWVCLHPQPLRGIPVIPEAEDPSYRLIHEFYERWECASLRICENE
FDAAHISFVHQNTFGSMEDLVPSHFEVEELDYGIRTRTVLGVANPELQQKNLGIAAAKTERTTTSTWHLPFTNHLHIRYP
NGRSHVIVNIPTPINDRASQVVQFCLRNDTEADTPAAEVIRFDRAVTLEDKAILETTDPDVPLTLSAEQHMLTDKPGILM
RKQLAALLKAHSSSSNQMF

Sequences:

>Translated_339_residues
MLVTQHPVFRRFWYPVMPLSRLEQGSPQPFELLGERIVLWLDKAGQPQAVADRCCHRSAQLSKGIVCDGHIRCPYHGWEF
DGTGACVKVPQLPDQARIPESYRIPAYLCQARYGYAWVCLHPQPLRGIPVIPEAEDPSYRLIHEFYERWECASLRICENE
FDAAHISFVHQNTFGSMEDLVPSHFEVEELDYGIRTRTVLGVANPELQQKNLGIAAAKTERTTTSTWHLPFTNHLHIRYP
NGRSHVIVNIPTPINDRASQVVQFCLRNDTEADTPAAEVIRFDRAVTLEDKAILETTDPDVPLTLSAEQHMLTDKPGILM
RKQLAALLKAHSSSSNQMF
>Mature_339_residues
MLVTQHPVFRRFWYPVMPLSRLEQGSPQPFELLGERIVLWLDKAGQPQAVADRCCHRSAQLSKGIVCDGHIRCPYHGWEF
DGTGACVKVPQLPDQARIPESYRIPAYLCQARYGYAWVCLHPQPLRGIPVIPEAEDPSYRLIHEFYERWECASLRICENE
FDAAHISFVHQNTFGSMEDLVPSHFEVEELDYGIRTRTVLGVANPELQQKNLGIAAAKTERTTTSTWHLPFTNHLHIRYP
NGRSHVIVNIPTPINDRASQVVQFCLRNDTEADTPAAEVIRFDRAVTLEDKAILETTDPDVPLTLSAEQHMLTDKPGILM
RKQLAALLKAHSSSSNQMF

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI71983709, Length=172, Percent_Identity=31.9767441860465, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI161085896, Length=169, Percent_Identity=28.4023668639053, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 38516; Mature: 38516

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVTQHPVFRRFWYPVMPLSRLEQGSPQPFELLGERIVLWLDKAGQPQAVADRCCHRSAQ
CCCCCCHHHHHHHCCCCCHHHHHCCCCCHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHH
LSKGIVCDGHIRCPYHGWEFDGTGACVKVPQLPDQARIPESYRIPAYLCQARYGYAWVCL
HCCCCEECCEEECCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCHHHHHHCCCCEEEEEE
HPQPLRGIPVIPEAEDPSYRLIHEFYERWECASLRICENEFDAAHISFVHQNTFGSMEDL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEECCCCCCHHHH
VPSHFEVEELDYGIRTRTVLGVANPELQQKNLGIAAAKTERTTTSTWHLPFTNHLHIRYP
CCCCCCHHHHCCCCEEEEEEECCCCCHHHCCCCEEEECCCCCCCEEEECCCCCEEEEECC
NGRSHVIVNIPTPINDRASQVVQFCLRNDTEADTPAAEVIRFDRAVTLEDKAILETTDPD
CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCEEEECCCEEEECCCCC
VPLTLSAEQHMLTDKPGILMRKQLAALLKAHSSSSNQMF
CCEEECCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLVTQHPVFRRFWYPVMPLSRLEQGSPQPFELLGERIVLWLDKAGQPQAVADRCCHRSAQ
CCCCCCHHHHHHHCCCCCHHHHHCCCCCHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHH
LSKGIVCDGHIRCPYHGWEFDGTGACVKVPQLPDQARIPESYRIPAYLCQARYGYAWVCL
HCCCCEECCEEECCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCHHHHHHCCCCEEEEEE
HPQPLRGIPVIPEAEDPSYRLIHEFYERWECASLRICENEFDAAHISFVHQNTFGSMEDL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEECCCCCCHHHH
VPSHFEVEELDYGIRTRTVLGVANPELQQKNLGIAAAKTERTTTSTWHLPFTNHLHIRYP
CCCCCCHHHHCCCCEEEEEEECCCCCHHHCCCCEEEECCCCCCCEEEECCCCCEEEEECC
NGRSHVIVNIPTPINDRASQVVQFCLRNDTEADTPAAEVIRFDRAVTLEDKAILETTDPD
CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCEEEECCCEEEECCCCC
VPLTLSAEQHMLTDKPGILMRKQLAALLKAHSSSSNQMF
CCEEECCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704279 [H]